RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 PAMR1Q6UXH9 720 aa11.37□□□□□ -0.59
GTF3A-209ENST00000640289 USP51Q70EK9 711 aa11.37□□□□□ -0.59
GTF3A-209ENST00000640289 SLC35F2Q8IXU6 374 aa11.37□□□□□ -0.59
GTF3A-209ENST00000640289 ZNF454Q8N9F8 522 aa11.37□□□□□ -0.59
GTF3A-209ENST00000640289 OR1J1Q8NGS3 322 aa11.37□□□□□ -0.59
GTF3A-209ENST00000640289 ABHD4Q8TB40 342 aa11.37□□□□□ -0.59
GTF3A-209ENST00000640289 TMEM171Q8WVE6 324 aa11.37□□□□□ -0.59
GTF3A-209ENST00000640289 RNF133Q8WVZ7 376 aa11.37□□□□□ -0.59
GTF3A-209ENST00000640289 RFKQ969G6 155 aa11.37□□□□□ -0.59
GTF3A-209ENST00000640289 TBX5Q99593 518 aa11.37□□□□□ -0.59
GTF3A-209ENST00000640289 COPS4Q9BT78 406 aa11.37□□□□□ -0.59
GTF3A-209ENST00000640289 POFUT1Q9H488 388 aa11.37□□□□□ -0.59
GTF3A-209ENST00000640289 DDX28Q9NUL7 540 aaKnown RBP11.37□□□□□ -0.59
GTF3A-209ENST00000640289 CLN6Q9NWW5 311 aa11.37□□□□□ -0.59
GTF3A-209ENST00000640289 EIF3KQ9UBQ5 218 aaKnown RBP11.37□□□□□ -0.59
GTF3A-209ENST00000640289 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.37□□□□□ -0.59
GTF3A-209ENST00000640289 FZR1Q9UM11 496 aa11.37□□□□□ -0.59
GTF3A-209ENST00000640289 LAMP3Q9UQV4 416 aa11.37□□□□□ -0.59
GTF3A-209ENST00000640289 SPEF1Q9Y4P9 236 aa11.37□□□□□ -0.59
GTF3A-209ENST00000640289 M0R135 149 aa11.36□□□□□ -0.59
GTF3A-209ENST00000640289 PSMD9O00233 223 aa11.36□□□□□ -0.59
GTF3A-209ENST00000640289 CD8AP01732 235 aa11.36□□□□□ -0.59
GTF3A-209ENST00000640289 OR4A8P0C604 315 aa11.36□□□□□ -0.59
GTF3A-209ENST00000640289 ACSM4P0C7M7 580 aa11.36□□□□□ -0.59
GTF3A-209ENST00000640289 GLRXP35754 106 aa11.36□□□□□ -0.59
GTF3A-209ENST00000640289 ATP6V1E1P36543 226 aa11.36□□□□□ -0.59
GTF3A-209ENST00000640289 VHLP40337 213 aa11.36□□□□□ -0.59
GTF3A-209ENST00000640289 OPRL1P41146 370 aa11.36□□□□□ -0.59
GTF3A-209ENST00000640289 RAD52P43351 418 aa11.36□□□□□ -0.59
GTF3A-209ENST00000640289 MTNR1AP48039 350 aa11.36□□□□□ -0.59
GTF3A-209ENST00000640289 PRKXP51817 358 aa11.36□□□□□ -0.59
GTF3A-209ENST00000640289 CXCR4P61073 352 aa11.36□□□□□ -0.59
GTF3A-209ENST00000640289 ZNF91Q05481 1191 aa11.36□□□□□ -0.59
GTF3A-209ENST00000640289 POU4F2Q12837 409 aa11.36□□□□□ -0.59
GTF3A-209ENST00000640289 ECH1Q13011 328 aa11.36□□□□□ -0.59
GTF3A-209ENST00000640289 TMED1Q13445 227 aa11.36□□□□□ -0.59
GTF3A-209ENST00000640289 IL18R1Q13478 541 aa11.36□□□□□ -0.59
GTF3A-209ENST00000640289 TAF13Q15543 124 aa11.36□□□□□ -0.59
GTF3A-209ENST00000640289 RGS7BPQ6MZT1 257 aaPredicted RBP11.36□□□□□ -0.59
GTF3A-209ENST00000640289 ZNF544Q6NX49 715 aa11.36□□□□□ -0.59
GTF3A-209ENST00000640289 LRRN1Q6UXK5 716 aa11.36□□□□□ -0.59
GTF3A-209ENST00000640289 C20orf204Q6ZNR8 217 aa11.36□□□□□ -0.59
GTF3A-209ENST00000640289 LRP11Q86VZ4 500 aa11.36□□□□□ -0.59
GTF3A-209ENST00000640289 C8orf59Q8N0T1 100 aaPredicted RBP11.36□□□□□ -0.59
GTF3A-209ENST00000640289 FBXL14Q8N1E6 418 aa11.36□□□□□ -0.59
GTF3A-209ENST00000640289 MUC15Q8N387 334 aa11.36□□□□□ -0.59
GTF3A-209ENST00000640289 SETD9Q8NE22 299 aa11.36□□□□□ -0.59
GTF3A-209ENST00000640289 RNFT2Q96EX2 444 aa11.36□□□□□ -0.59
GTF3A-209ENST00000640289 ZNF799Q96GE5 643 aa11.36□□□□□ -0.59
GTF3A-209ENST00000640289 Q96MT0 163 aa11.36□□□□□ -0.59
GTF3A-209ENST00000640289 DCLRE1CQ96SD1 692 aaKnown RBP11.36□□□□□ -0.59
GTF3A-209ENST00000640289 MRPL37Q9BZE1 423 aaKnown RBP11.36□□□□□ -0.59
GTF3A-209ENST00000640289 BCL2L14Q9BZR8 327 aa11.36□□□□□ -0.59
GTF3A-209ENST00000640289 ZNF442Q9H7R0 627 aa11.36□□□□□ -0.59
GTF3A-209ENST00000640289 SLCO1C1Q9NYB5 712 aa11.36□□□□□ -0.59
GTF3A-209ENST00000640289 ST6GALNAC2Q9UJ37 374 aa11.36□□□□□ -0.59
GTF3A-209ENST00000640289 MAGEB4O15481 346 aaPredicted RBP11.35□□□□□ -0.59
GTF3A-209ENST00000640289 ICMTO60725 284 aa11.35□□□□□ -0.59
GTF3A-209ENST00000640289 ATE1O95260 518 aa11.35□□□□□ -0.59
GTF3A-209ENST00000640289 CLPTM1O96005 669 aa11.35□□□□□ -0.59
GTF3A-209ENST00000640289 RAF1P04049 648 aa11.35□□□□□ -0.59
GTF3A-209ENST00000640289 H2BFMP0C1H6 154 aa11.35□□□□□ -0.59
GTF3A-209ENST00000640289 SLC2A1P11166 492 aa11.35□□□□□ -0.59
GTF3A-209ENST00000640289 DBTP11182 482 aaKnown RBP11.35□□□□□ -0.59
GTF3A-209ENST00000640289 CD53P19397 219 aa11.35□□□□□ -0.59
GTF3A-209ENST00000640289 OTX1P32242 354 aaPredicted RBP11.35□□□□□ -0.59
GTF3A-209ENST00000640289 TPTEP56180 551 aa11.35□□□□□ -0.59
GTF3A-209ENST00000640289 PPP1CBP62140 327 aa11.35□□□□□ -0.59
GTF3A-209ENST00000640289 RPS23P62266 143 aaKnown RBP11.35□□□□□ -0.59
GTF3A-209ENST00000640289 MST1LQ2TV78 715 aa11.35□□□□□ -0.59
GTF3A-209ENST00000640289 ARL9Q6T311 187 aa11.35□□□□□ -0.59
GTF3A-209ENST00000640289 SSX6Q7RTT6 188 aa11.35□□□□□ -0.59
GTF3A-209ENST00000640289 DTX2Q86UW9 622 aa11.35□□□□□ -0.59
GTF3A-209ENST00000640289 ZNF283Q8N7M2 679 aa11.35□□□□□ -0.59
GTF3A-209ENST00000640289 OR10H4Q8NGA5 316 aa11.35□□□□□ -0.59
GTF3A-209ENST00000640289 SLC25A40Q8TBP6 338 aa11.35□□□□□ -0.59
GTF3A-209ENST00000640289 IGFBPL1Q8WX77 278 aa11.35□□□□□ -0.59
GTF3A-209ENST00000640289 SPTSSAQ969W0 71 aa11.35□□□□□ -0.59
GTF3A-209ENST00000640289 MRPL24Q96A35 216 aaKnown RBP11.35□□□□□ -0.59
GTF3A-209ENST00000640289 LGALS12Q96DT0 336 aa11.35□□□□□ -0.59
GTF3A-209ENST00000640289 KCNJ15Q99712 375 aa11.35□□□□□ -0.59
GTF3A-209ENST00000640289 CCL19Q99731 98 aa11.35□□□□□ -0.59
GTF3A-209ENST00000640289 SYT3Q9BQG1 590 aa11.35□□□□□ -0.59
GTF3A-209ENST00000640289 TRAF4Q9BUZ4 470 aaPredicted RBP11.35□□□□□ -0.59
GTF3A-209ENST00000640289 OR2J1Q9GZK6 312 aa11.35□□□□□ -0.59
GTF3A-209ENST00000640289 ELOVL3Q9HB03 270 aa11.35□□□□□ -0.59
GTF3A-209ENST00000640289 FAIMQ9NVQ4 179 aa11.35□□□□□ -0.59
GTF3A-209ENST00000640289 TBCCD1Q9NVR7 557 aa11.35□□□□□ -0.59
GTF3A-209ENST00000640289 MYEF2Q9P2K5 600 aaKnown RBP11.35□□□□□ -0.59
GTF3A-209ENST00000640289 STARD10Q9Y365 291 aa11.35□□□□□ -0.59
GTF3A-209ENST00000640289 CMAHPQ9Y471 501 aa11.35□□□□□ -0.59
GTF3A-209ENST00000640289 ASH1LQ9NR48 2969 aaKnown RBP11.34□□□□□ -0.59
GTF3A-209ENST00000640289 A0A1W2PQL4 384 aaPredicted RBP11.34□□□□□ -0.59
GTF3A-209ENST00000640289 TMEM129A0AVI4 362 aa11.34□□□□□ -0.59
GTF3A-209ENST00000640289 C5orf63A6NC05 138 aa11.34□□□□□ -0.59
GTF3A-209ENST00000640289 SNTNA6NMZ2 147 aa11.34□□□□□ -0.59
GTF3A-209ENST00000640289 ZNF670-ZNF695F2Z2N8 137 aa11.34□□□□□ -0.59
GTF3A-209ENST00000640289 HSD11B1P28845 292 aa11.34□□□□□ -0.59
GTF3A-209ENST00000640289 SERPINF1P36955 418 aa11.34□□□□□ -0.59
GTF3A-209ENST00000640289 CDKN1AP38936 164 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms