RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 C2orf76Q3KRA6 126 aa13.41□□□□□ -0.26
TRIM3-215ENST00000639856 TMEM176BQ3YBM2 270 aaPredicted RBP13.41□□□□□ -0.26
TRIM3-215ENST00000639856 THEM4Q5T1C6 240 aa13.41□□□□□ -0.26
TRIM3-215ENST00000639856 CORO6Q6QEF8 472 aa13.41□□□□□ -0.26
TRIM3-215ENST00000639856 FGD2Q7Z6J4 655 aa13.41□□□□□ -0.26
TRIM3-215ENST00000639856 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.41□□□□□ -0.26
TRIM3-215ENST00000639856 PLPP7Q8NBV4 271 aa13.41□□□□□ -0.26
TRIM3-215ENST00000639856 ADAMTS17Q8TE56 1095 aa13.41□□□□□ -0.26
TRIM3-215ENST00000639856 SLC25A43Q8WUT9 341 aaPredicted RBP13.41□□□□□ -0.26
TRIM3-215ENST00000639856 C11orf40Q8WZ69 217 aa13.41□□□□□ -0.26
TRIM3-215ENST00000639856 SLC25A44Q96H78 314 aaPredicted RBP13.41□□□□□ -0.26
TRIM3-215ENST00000639856 GON7Q9BXV9 100 aa13.41□□□□□ -0.26
TRIM3-215ENST00000639856 EMC7Q9NPA0 242 aa13.41□□□□□ -0.26
TRIM3-215ENST00000639856 DIABLOQ9NR28 239 aa13.41□□□□□ -0.26
TRIM3-215ENST00000639856 SLC17A5Q9NRA2 495 aa13.41□□□□□ -0.26
TRIM3-215ENST00000639856 NKIRAS2Q9NYR9 191 aa13.41□□□□□ -0.26
TRIM3-215ENST00000639856 TAS2R4Q9NYW5 299 aa13.41□□□□□ -0.26
TRIM3-215ENST00000639856 LOC107986453A0A1B0GWG9 222 aa13.4□□□□□ -0.26
TRIM3-215ENST00000639856 FABP7O15540 132 aa13.4□□□□□ -0.26
TRIM3-215ENST00000639856 CD37P11049 281 aa13.4□□□□□ -0.26
TRIM3-215ENST00000639856 SDHBP21912 280 aa13.4□□□□□ -0.26
TRIM3-215ENST00000639856 DCTDP32321 178 aa13.4□□□□□ -0.26
TRIM3-215ENST00000639856 EIF1P41567 113 aaKnown RBP13.4□□□□□ -0.26
TRIM3-215ENST00000639856 MMP16P51512 607 aa13.4□□□□□ -0.26
TRIM3-215ENST00000639856 GPR85P60893 370 aa13.4□□□□□ -0.26
TRIM3-215ENST00000639856 GABREP78334 506 aa13.4□□□□□ -0.26
TRIM3-215ENST00000639856 GLT8D1Q68CQ7 371 aa13.4□□□□□ -0.26
TRIM3-215ENST00000639856 BEST4Q8NFU0 473 aa13.4□□□□□ -0.26
TRIM3-215ENST00000639856 OR10H5Q8NGA6 315 aa13.4□□□□□ -0.26
TRIM3-215ENST00000639856 OR13C3Q8NGS6 347 aa13.4□□□□□ -0.26
TRIM3-215ENST00000639856 NKD1Q969G9 470 aa13.4□□□□□ -0.26
TRIM3-215ENST00000639856 ZBTB8AQ96BR9 441 aa13.4□□□□□ -0.26
TRIM3-215ENST00000639856 SGCZQ96LD1 299 aa13.4□□□□□ -0.26
TRIM3-215ENST00000639856 CENPMQ9NSP4 180 aa13.4□□□□□ -0.26
TRIM3-215ENST00000639856 EMC3Q9P0I2 261 aa13.4□□□□□ -0.26
TRIM3-215ENST00000639856 ZNF222Q9UK12 451 aa13.4□□□□□ -0.26
TRIM3-215ENST00000639856 PHF3Q92576 2039 aaKnown RBP13.4□□□□□ -0.26
TRIM3-215ENST00000639856 ZNF814B7Z6K7 855 aa13.4□□□□□ -0.26
TRIM3-215ENST00000639856 H7C417 338 aa13.4□□□□□ -0.26
TRIM3-215ENST00000639856 ZIC3O60481 467 aa13.4□□□□□ -0.26
TRIM3-215ENST00000639856 PRAF2O60831 178 aa13.4□□□□□ -0.26
TRIM3-215ENST00000639856 ANXA3P12429 323 aa13.4□□□□□ -0.26
TRIM3-215ENST00000639856 S100A1P23297 94 aa13.4□□□□□ -0.26
TRIM3-215ENST00000639856 FKBP2P26885 142 aaKnown RBP13.4□□□□□ -0.26
TRIM3-215ENST00000639856 LAP3P28838 519 aa13.4□□□□□ -0.26
TRIM3-215ENST00000639856 TGIF1Q15583 401 aa13.4□□□□□ -0.26
TRIM3-215ENST00000639856 TMEM244Q5VVB8 128 aa13.4□□□□□ -0.26
TRIM3-215ENST00000639856 GTPBP8Q8N3Z3 284 aaPredicted RBP13.4□□□□□ -0.26
TRIM3-215ENST00000639856 DEDD2Q8WXF8 326 aa13.4□□□□□ -0.26
TRIM3-215ENST00000639856 SLC25A28Q96A46 364 aa13.4□□□□□ -0.26
TRIM3-215ENST00000639856 MTFP1Q9UDX5 166 aa13.4□□□□□ -0.26
TRIM3-215ENST00000639856 CYB5R1Q9UHQ9 305 aa13.4□□□□□ -0.26
TRIM3-215ENST00000639856 DKKL1Q9UK85 242 aa13.4□□□□□ -0.26
TRIM3-215ENST00000639856 CUL9Q8IWT3 2517 aa13.4□□□□□ -0.26
TRIM3-215ENST00000639856 GVINP1Q7Z2Y8 2422 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 CIB4A0PJX0 185 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 MEGF11A6BM72 1044 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 TRAF3IP2O43734 574 aaPredicted RBP13.39□□□□□ -0.27
TRIM3-215ENST00000639856 RBBP9O75884 186 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 IGHG1P01857 330 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 UBCP0CG48 685 aaKnown RBP13.39□□□□□ -0.27
TRIM3-215ENST00000639856 PGA4P0DJD7 388 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 PGA3P0DJD8 388 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 CXCL3P19876 107 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 CLRN1P58418 232 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 DCAF10Q5QP82 559 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 RAET1LQ5VY80 246 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 LAMTOR1Q6IAA8 161 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 BIVMQ86UB2 503 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 GPAT4Q86UL3 456 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 IL22RA1Q8N6P7 574 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 NOXO1Q8NFA2 376 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 DACT3Q96B18 629 aaPredicted RBP13.39□□□□□ -0.27
TRIM3-215ENST00000639856 SLAMF6Q96DU3 332 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 DEPPQ9NTK1 212 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 ING4Q9UNL4 249 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 FLVCR2Q9UPI3 526 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 HDGFL3Q9Y3E1 203 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 A6NL46 340 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 EIF1AYO14602 144 aaKnown RBP13.39□□□□□ -0.27
TRIM3-215ENST00000639856 DOK2O60496 412 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 RAMP1O60894 148 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 P04436 131 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 SULT1A3P0DMM9 295 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 SULT1A4P0DMN0 295 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 HTR2CP28335 458 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 DSCR4P56555 118 aaPredicted RBP13.39□□□□□ -0.27
TRIM3-215ENST00000639856 OC90Q02509 493 aaPredicted RBP13.39□□□□□ -0.27
TRIM3-215ENST00000639856 CAMK2DQ13557 499 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 ZNF239Q16600 458 aaKnown RBP13.39□□□□□ -0.27
TRIM3-215ENST00000639856 GLYATL3Q5SZD4 288 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 ATP1A1-AS1Q5TC04 95 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 TMEM41AQ96HV5 264 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 OXGR1Q96P68 337 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 C1orf198Q9H425 327 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 KCNK15Q9H427 330 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 BEX1Q9HBH7 125 aa13.39□□□□□ -0.27
TRIM3-215ENST00000639856 A0A087WZY1 265 aa13.38□□□□□ -0.27
TRIM3-215ENST00000639856 TMEM272A0A1B0GTI8 110 aa13.38□□□□□ -0.27
TRIM3-215ENST00000639856 OR2M5A3KFT3 312 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms