RNA–Protein interactions for RNA: ENST00000639439.1

PTPRVP-204, Transcript of protein tyrosine phosphatase, receptor type V, pseudogene, humanhuman

TSL 1 (best)

Gene PTPRVP, Length 821 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRVP-204ENST00000639439 G6PC2Q9NQR9 355 aa13.17□□□□□ -0.3
PTPRVP-204ENST00000639439 B9D1Q9UPM9 204 aa13.17□□□□□ -0.3
PTPRVP-204ENST00000639439 ISPDA4D126 451 aa13.16□□□□□ -0.3
PTPRVP-204ENST00000639439 PLPP2O43688 288 aa13.16□□□□□ -0.3
PTPRVP-204ENST00000639439 HIST1H1CP16403 213 aaKnown RBP13.16□□□□□ -0.3
PTPRVP-204ENST00000639439 GATA3P23771 443 aa13.16□□□□□ -0.3
PTPRVP-204ENST00000639439 COX10Q12887 443 aa13.16□□□□□ -0.3
PTPRVP-204ENST00000639439 TSPAN31Q12999 210 aa13.16□□□□□ -0.3
PTPRVP-204ENST00000639439 SLC27A4Q6P1M0 643 aa13.16□□□□□ -0.3
PTPRVP-204ENST00000639439 FBXW12Q6X9E4 464 aa13.16□□□□□ -0.3
PTPRVP-204ENST00000639439 OR6V1Q8N148 313 aa13.16□□□□□ -0.3
PTPRVP-204ENST00000639439 LINC00471Q8N535 108 aa13.16□□□□□ -0.3
PTPRVP-204ENST00000639439 OR2Z1Q8NG97 314 aa13.16□□□□□ -0.3
PTPRVP-204ENST00000639439 OR4K13Q8NH42 304 aa13.16□□□□□ -0.3
PTPRVP-204ENST00000639439 SLC7A6Q92536 515 aa13.16□□□□□ -0.3
PTPRVP-204ENST00000639439 APOBEC3DQ96AK3 386 aaPredicted RBP13.16□□□□□ -0.3
PTPRVP-204ENST00000639439 NMNAT3Q96T66 252 aa13.16□□□□□ -0.3
PTPRVP-204ENST00000639439 SRA1Q9HD15 236 aaKnown RBP13.16□□□□□ -0.3
PTPRVP-204ENST00000639439 TMEM106BQ9NUM4 274 aa13.16□□□□□ -0.3
PTPRVP-204ENST00000639439 IL19Q9UHD0 177 aa13.16□□□□□ -0.3
PTPRVP-204ENST00000639439 NPTNQ9Y639 398 aa13.16□□□□□ -0.3
PTPRVP-204ENST00000639439 LHFPL6Q9Y693 200 aa13.16□□□□□ -0.3
PTPRVP-204ENST00000639439 WNK2Q9Y3S1 2297 aa13.15□□□□□ -0.3
PTPRVP-204ENST00000639439 IFNL4K9M1U5 179 aa13.15□□□□□ -0.3
PTPRVP-204ENST00000639439 DCTN6O00399 190 aa13.15□□□□□ -0.3
PTPRVP-204ENST00000639439 DBHP09172 617 aa13.15□□□□□ -0.3
PTPRVP-204ENST00000639439 HMGA2P52926 109 aa13.15□□□□□ -0.3
PTPRVP-204ENST00000639439 SRSF2Q01130 221 aaKnown RBP13.15□□□□□ -0.3
PTPRVP-204ENST00000639439 ECH1Q13011 328 aa13.15□□□□□ -0.3
PTPRVP-204ENST00000639439 OTPQ5XKR4 325 aa13.15□□□□□ -0.3
PTPRVP-204ENST00000639439 RPL13AP3Q6NVV1 102 aa13.15□□□□□ -0.3
PTPRVP-204ENST00000639439 ZNF620Q6ZNG0 422 aa13.15□□□□□ -0.3
PTPRVP-204ENST00000639439 Q6ZR03 302 aa13.15□□□□□ -0.3
PTPRVP-204ENST00000639439 ZBTB46Q86UZ6 589 aa13.15□□□□□ -0.3
PTPRVP-204ENST00000639439 ARHGAP24Q8N264 748 aa13.15□□□□□ -0.3
PTPRVP-204ENST00000639439 SPICQ8N5J4 248 aa13.15□□□□□ -0.3
PTPRVP-204ENST00000639439 ZNF283Q8N7M2 679 aa13.15□□□□□ -0.3
PTPRVP-204ENST00000639439 SLC26A10Q8NG04 563 aa13.15□□□□□ -0.3
PTPRVP-204ENST00000639439 OR52L1Q8NGH7 329 aa13.15□□□□□ -0.3
PTPRVP-204ENST00000639439 ST7LQ8TDW4 575 aa13.15□□□□□ -0.3
PTPRVP-204ENST00000639439 OCEL1Q9H607 264 aa13.15□□□□□ -0.3
PTPRVP-204ENST00000639439 ACTR3BQ9P1U1 418 aa13.15□□□□□ -0.3
PTPRVP-204ENST00000639439 FOXH1O75593 365 aa13.14□□□□□ -0.31
PTPRVP-204ENST00000639439 GPANK1O95872 356 aa13.14□□□□□ -0.31
PTPRVP-204ENST00000639439 GYS2P54840 703 aa13.14□□□□□ -0.31
PTPRVP-204ENST00000639439 MEP1BQ16820 701 aa13.14□□□□□ -0.31
PTPRVP-204ENST00000639439 DCAF12L2Q5VW00 463 aa13.14□□□□□ -0.31
PTPRVP-204ENST00000639439 PGBD2Q6P3X8 592 aa13.14□□□□□ -0.31
PTPRVP-204ENST00000639439 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.14□□□□□ -0.31
PTPRVP-204ENST00000639439 OR13G1Q8NGZ3 307 aa13.14□□□□□ -0.31
PTPRVP-204ENST00000639439 ZNF418Q8TF45 676 aaPredicted RBP13.14□□□□□ -0.31
PTPRVP-204ENST00000639439 ZFAND2BQ8WV99 257 aa13.14□□□□□ -0.31
PTPRVP-204ENST00000639439 POP5Q969H6 163 aaKnown RBP13.14□□□□□ -0.31
PTPRVP-204ENST00000639439 CDADC1Q9BWV3 514 aa13.14□□□□□ -0.31
PTPRVP-204ENST00000639439 TRIM15Q9C019 465 aa13.14□□□□□ -0.31
PTPRVP-204ENST00000639439 MUC13Q9H3R2 512 aa13.14□□□□□ -0.31
PTPRVP-204ENST00000639439 RPRD1BQ9NQG5 326 aaKnown RBP13.14□□□□□ -0.31
PTPRVP-204ENST00000639439 UBAP1Q9NZ09 502 aa13.14□□□□□ -0.31
PTPRVP-204ENST00000639439 PTTG3PQ9NZH4 202 aa13.14□□□□□ -0.31
PTPRVP-204ENST00000639439 KCNG2Q9UJ96 466 aa13.14□□□□□ -0.31
PTPRVP-204ENST00000639439 PCDHB10Q9UN67 800 aa13.14□□□□□ -0.31
PTPRVP-204ENST00000639439 PPP1R3CQ9UQK1 317 aa13.14□□□□□ -0.31
PTPRVP-204ENST00000639439 CDH10Q9Y6N8 788 aa13.14□□□□□ -0.31
PTPRVP-204ENST00000639439 PPIAL4EA0A075B759 164 aa13.13□□□□□ -0.31
PTPRVP-204ENST00000639439 PPIAL4CA0A0B4J2A2 164 aa13.13□□□□□ -0.31
PTPRVP-204ENST00000639439 PPIAL4DF5H284 164 aa13.13□□□□□ -0.31
PTPRVP-204ENST00000639439 TNFRSF11BO00300 401 aa13.13□□□□□ -0.31
PTPRVP-204ENST00000639439 IGHV2-70P01814 119 aa13.13□□□□□ -0.31
PTPRVP-204ENST00000639439 HLA-DQA2P01906 255 aa13.13□□□□□ -0.31
PTPRVP-204ENST00000639439 SBK2P0C263 348 aa13.13□□□□□ -0.31
PTPRVP-204ENST00000639439 PPIAL4FP0DN26 164 aa13.13□□□□□ -0.31
PTPRVP-204ENST00000639439 SELEP16581 610 aa13.13□□□□□ -0.31
PTPRVP-204ENST00000639439 TMEM155Q4W5P6 130 aa13.13□□□□□ -0.31
PTPRVP-204ENST00000639439 SPRNQ5BIV9 151 aa13.13□□□□□ -0.31
PTPRVP-204ENST00000639439 SLC18B1Q6NT16 456 aa13.13□□□□□ -0.31
PTPRVP-204ENST00000639439 CORO6Q6QEF8 472 aa13.13□□□□□ -0.31
PTPRVP-204ENST00000639439 COLCA1Q6ZS62 124 aa13.13□□□□□ -0.31
PTPRVP-204ENST00000639439 C1QL2Q7Z5L3 287 aa13.13□□□□□ -0.31
PTPRVP-204ENST00000639439 KLHL36Q8N4N3 616 aa13.13□□□□□ -0.31
PTPRVP-204ENST00000639439 ATG16L2Q8NAA4 619 aa13.13□□□□□ -0.31
PTPRVP-204ENST00000639439 SDR9C7Q8NEX9 313 aa13.13□□□□□ -0.31
PTPRVP-204ENST00000639439 OR8G5Q8NG78 346 aa13.13□□□□□ -0.31
PTPRVP-204ENST00000639439 OR52E2Q8NGJ4 325 aa13.13□□□□□ -0.31
PTPRVP-204ENST00000639439 OR2AJ1Q8NGZ0 328 aa13.13□□□□□ -0.31
PTPRVP-204ENST00000639439 ITLN1Q8WWA0 313 aa13.13□□□□□ -0.31
PTPRVP-204ENST00000639439 ZNF582Q96NG8 517 aaPredicted RBP13.13□□□□□ -0.31
PTPRVP-204ENST00000639439 OR2V2Q96R30 315 aa13.13□□□□□ -0.31
PTPRVP-204ENST00000639439 PITX2Q99697 317 aa13.13□□□□□ -0.31
PTPRVP-204ENST00000639439 TMPRSS13Q9BYE2 586 aa13.13□□□□□ -0.31
PTPRVP-204ENST00000639439 LYVE1Q9Y5Y7 322 aa13.13□□□□□ -0.31
PTPRVP-204ENST00000639439 LOC105371242A0A075B767 164 aa13.12□□□□□ -0.31
PTPRVP-204ENST00000639439 OR6C68A6NDL8 312 aa13.12□□□□□ -0.31
PTPRVP-204ENST00000639439 B2RBV5 119 aa13.12□□□□□ -0.31
PTPRVP-204ENST00000639439 EPHA1P21709 976 aa13.12□□□□□ -0.31
PTPRVP-204ENST00000639439 MAGEA2P43356 314 aa13.12□□□□□ -0.31
PTPRVP-204ENST00000639439 BTG1P62324 171 aa13.12□□□□□ -0.31
PTPRVP-204ENST00000639439 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.12□□□□□ -0.31
PTPRVP-204ENST00000639439 HLXQ14774 488 aaPredicted RBP13.12□□□□□ -0.31
PTPRVP-204ENST00000639439 KRTAP27-1Q3LI81 207 aa13.12□□□□□ -0.31
PTPRVP-204ENST00000639439 OR2T2Q6IF00 324 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms