RNA–Protein interactions for RNA: ENST00000637594.1

CLN8-214, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 406 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-214ENST00000637594 ACOT11Q8WXI4 607 aaPredicted RBP7.35□□□□□ -1.23
CLN8-214ENST00000637594 LZICQ8WZA0 190 aa7.35□□□□□ -1.23
CLN8-214ENST00000637594 APOBEC3DQ96AK3 386 aaPredicted RBP7.35□□□□□ -1.23
CLN8-214ENST00000637594 NEIL1Q96FI4 390 aaPredicted RBP7.35□□□□□ -1.23
CLN8-214ENST00000637594 ZNF582Q96NG8 517 aaPredicted RBP7.35□□□□□ -1.23
CLN8-214ENST00000637594 CITED1Q99966 193 aa7.35□□□□□ -1.23
CLN8-214ENST00000637594 TMEM246Q9BRR3 403 aa7.35□□□□□ -1.23
CLN8-214ENST00000637594 FNDC11Q9BVV2 318 aa7.35□□□□□ -1.23
CLN8-214ENST00000637594 ANKRD19PQ9H560 264 aa7.35□□□□□ -1.23
CLN8-214ENST00000637594 BEX1Q9HBH7 125 aa7.35□□□□□ -1.23
CLN8-214ENST00000637594 EMC7Q9NPA0 242 aa7.35□□□□□ -1.23
CLN8-214ENST00000637594 NRIP3Q9NQ35 241 aa7.35□□□□□ -1.23
CLN8-214ENST00000637594 INTS9Q9NV88 658 aaKnown RBP7.35□□□□□ -1.23
CLN8-214ENST00000637594 VSX1Q9NZR4 365 aaPredicted RBP7.35□□□□□ -1.23
CLN8-214ENST00000637594 AP3M1Q9Y2T2 418 aa7.35□□□□□ -1.23
CLN8-214ENST00000637594 SOX21Q9Y651 276 aaPredicted RBP7.35□□□□□ -1.23
CLN8-214ENST00000637594 A0A0G2JK05 382 aa7.34□□□□□ -1.23
CLN8-214ENST00000637594 ELOVL7A1L3X0 281 aa7.34□□□□□ -1.23
CLN8-214ENST00000637594 LRRC30A6NM36 301 aa7.34□□□□□ -1.23
CLN8-214ENST00000637594 FAM220BPB1ANY3 271 aa7.34□□□□□ -1.23
CLN8-214ENST00000637594 XKRYO14609 159 aa7.34□□□□□ -1.23
CLN8-214ENST00000637594 TNFRSF13BO14836 293 aaPredicted RBP7.34□□□□□ -1.23
CLN8-214ENST00000637594 HOXA3O43365 443 aaPredicted RBP7.34□□□□□ -1.23
CLN8-214ENST00000637594 KHDRBS3O75525 346 aaKnown RBP7.34□□□□□ -1.23
CLN8-214ENST00000637594 TXNDC12O95881 172 aa7.34□□□□□ -1.23
CLN8-214ENST00000637594 LIPFP07098 398 aa7.34□□□□□ -1.23
CLN8-214ENST00000637594 RPS2P15880 293 aaKnown RBP7.34□□□□□ -1.23
CLN8-214ENST00000637594 CTLA4P16410 223 aa7.34□□□□□ -1.23
CLN8-214ENST00000637594 PSMB10P40306 273 aa7.34□□□□□ -1.23
CLN8-214ENST00000637594 NPY4RP50391 375 aa7.34□□□□□ -1.23
CLN8-214ENST00000637594 ERFP50548 548 aa7.34□□□□□ -1.23
CLN8-214ENST00000637594 DEFB112Q30KQ8 113 aa7.34□□□□□ -1.23
CLN8-214ENST00000637594 C11orf91Q3C1V1 193 aa7.34□□□□□ -1.23
CLN8-214ENST00000637594 MESTQ5EB52 335 aa7.34□□□□□ -1.23
CLN8-214ENST00000637594 GPR139Q6DWJ6 353 aa7.34□□□□□ -1.23
CLN8-214ENST00000637594 NLRC3Q7RTR2 1065 aa7.34□□□□□ -1.23
CLN8-214ENST00000637594 MICU2Q8IYU8 434 aa7.34□□□□□ -1.23
CLN8-214ENST00000637594 C1orf87Q8N0U7 546 aa7.34□□□□□ -1.23
CLN8-214ENST00000637594 FITM2Q8N6M3 262 aa7.34□□□□□ -1.23
CLN8-214ENST00000637594 GJC3Q8NFK1 279 aa7.34□□□□□ -1.23
CLN8-214ENST00000637594 OR10S1Q8NGN2 331 aa7.34□□□□□ -1.23
CLN8-214ENST00000637594 ZNF420Q8TAQ5 688 aaPredicted RBP7.34□□□□□ -1.23
CLN8-214ENST00000637594 TPD52L3Q96J77 140 aa7.34□□□□□ -1.23
CLN8-214ENST00000637594 FAM71F1Q96KD3 344 aaPredicted RBP7.34□□□□□ -1.23
CLN8-214ENST00000637594 Q96M85 177 aa7.34□□□□□ -1.23
CLN8-214ENST00000637594 GPX7Q96SL4 187 aaPredicted RBP7.34□□□□□ -1.23
CLN8-214ENST00000637594 COQ7Q99807 217 aa7.34□□□□□ -1.23
CLN8-214ENST00000637594 NUDT16L1Q9BRJ7 211 aaKnown RBP7.34□□□□□ -1.23
CLN8-214ENST00000637594 TMEM100Q9NV29 134 aa7.34□□□□□ -1.23
CLN8-214ENST00000637594 GID8Q9NWU2 228 aa7.34□□□□□ -1.23
CLN8-214ENST00000637594 ARMCX1Q9P291 453 aa7.34□□□□□ -1.23
CLN8-214ENST00000637594 ADAM18Q9Y3Q7 739 aa7.34□□□□□ -1.23
CLN8-214ENST00000637594 SNX13Q9Y5W8 968 aa7.34□□□□□ -1.23
CLN8-214ENST00000637594 POMT1Q9Y6A1 747 aa7.34□□□□□ -1.23
CLN8-214ENST00000637594 A0A0G2JND7 137 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 FAM181BA6NEQ2 426 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 HMGB1P1B2RPK0 211 aaPredicted RBP7.33□□□□□ -1.24
CLN8-214ENST00000637594 H0YL77 283 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 H7C1C5 153 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 PHYHO14832 338 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 RER1O15258 196 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 MLNRO43193 412 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 SLC16A7O60669 478 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 PTBP3O95758 552 aaKnown RBP7.33□□□□□ -1.24
CLN8-214ENST00000637594 GPANK1O95872 356 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 CYB5R3P00387 301 aaPredicted RBP7.33□□□□□ -1.24
CLN8-214ENST00000637594 KNG1P01042 644 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 IFNW1P05000 195 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 SELEP16581 610 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 SDHAP31040 664 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 RPL4P36578 427 aaKnown RBP7.33□□□□□ -1.24
CLN8-214ENST00000637594 LCN6P62502 163 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 KLF10Q13118 480 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 MAB21L1Q13394 359 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 HLXQ14774 488 aaPredicted RBP7.33□□□□□ -1.24
CLN8-214ENST00000637594 MIDNQ504T8 468 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 CD276Q5ZPR3 534 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 WDR25Q64LD2 544 aaPredicted RBP7.33□□□□□ -1.24
CLN8-214ENST00000637594 OLFML2AQ68BL7 652 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 OR2T2Q6IF00 324 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 PGM2L1Q6PCE3 622 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 TBPL2Q6SJ96 375 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 ZNF730Q6ZMV8 503 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 DPY19L2P2Q6ZN68 376 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 DCDC5Q6ZRR9 648 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 SPATC1Q76KD6 591 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 ADCK1Q86TW2 530 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 PLPP7Q8NBV4 271 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 OR2T12Q8NG77 320 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 OR8B3Q8NGG8 313 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 OR13C2Q8NGS9 318 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 OR4F5Q8NH21 305 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 WFDC12Q8WWY7 111 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 SLC7A6Q92536 515 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 TAF15Q92804 592 aaKnown RBP eCLIP7.33□□□□□ -1.24
CLN8-214ENST00000637594 OR8B2Q96RD0 313 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 NDEL1Q9GZM8 345 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 C1RLQ9NZP8 487 aa7.33□□□□□ -1.24
CLN8-214ENST00000637594 PDP1Q9P0J1 537 aaPredicted RBP7.33□□□□□ -1.24
CLN8-214ENST00000637594 RHCGQ9UBD6 479 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms