RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 MUC13Q9H3R2 512 aa16.08■□□□□ 0.16
CLN6-221ENST00000637494 OCEL1Q9H607 264 aa16.08■□□□□ 0.16
CLN6-221ENST00000637494 RPRD1BQ9NQG5 326 aaKnown RBP16.08■□□□□ 0.16
CLN6-221ENST00000637494 ATRQ13535 2644 aa16.07■□□□□ 0.16
CLN6-221ENST00000637494 A0A0G2JMP0 313 aa16.07■□□□□ 0.16
CLN6-221ENST00000637494 A0A0X1KG70 313 aa16.07■□□□□ 0.16
CLN6-221ENST00000637494 UBOX5O94941 541 aa16.07■□□□□ 0.16
CLN6-221ENST00000637494 IGHV2-5P01817 119 aa16.07■□□□□ 0.16
CLN6-221ENST00000637494 KRTAP24-1Q3LI83 254 aa16.07■□□□□ 0.16
CLN6-221ENST00000637494 TMEM255AQ5JRV8 349 aa16.07■□□□□ 0.16
CLN6-221ENST00000637494 SLC27A4Q6P1M0 643 aa16.07■□□□□ 0.16
CLN6-221ENST00000637494 ZNF620Q6ZNG0 422 aa16.07■□□□□ 0.16
CLN6-221ENST00000637494 OR6V1Q8N148 313 aa16.07■□□□□ 0.16
CLN6-221ENST00000637494 OR4M2Q8NGB6 313 aa16.07■□□□□ 0.16
CLN6-221ENST00000637494 SLC7A6Q92536 515 aa16.07■□□□□ 0.16
CLN6-221ENST00000637494 POFUT1Q9H488 388 aa16.07■□□□□ 0.16
CLN6-221ENST00000637494 METTL17Q9H7H0 456 aaPredicted RBP16.07■□□□□ 0.16
CLN6-221ENST00000637494 UBAP1Q9NZ09 502 aa16.07■□□□□ 0.16
CLN6-221ENST00000637494 PTTG3PQ9NZH4 202 aa16.07■□□□□ 0.16
CLN6-221ENST00000637494 IL19Q9UHD0 177 aa16.07■□□□□ 0.16
CLN6-221ENST00000637494 PCDHB10Q9UN67 800 aa16.07■□□□□ 0.16
CLN6-221ENST00000637494 IGLV1-36A0A0B4J1U3 117 aa16.06■□□□□ 0.16
CLN6-221ENST00000637494 PLPP2O43688 288 aa16.06■□□□□ 0.16
CLN6-221ENST00000637494 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.06■□□□□ 0.16
CLN6-221ENST00000637494 COX10Q12887 443 aa16.06■□□□□ 0.16
CLN6-221ENST00000637494 ECH1Q13011 328 aa16.06■□□□□ 0.16
CLN6-221ENST00000637494 MEP1BQ16820 701 aa16.06■□□□□ 0.16
CLN6-221ENST00000637494 PGBD2Q6P3X8 592 aa16.06■□□□□ 0.16
CLN6-221ENST00000637494 DHFR2Q86XF0 187 aa16.06■□□□□ 0.16
CLN6-221ENST00000637494 ATG16L2Q8NAA4 619 aa16.06■□□□□ 0.16
CLN6-221ENST00000637494 SDR9C7Q8NEX9 313 aa16.06■□□□□ 0.16
CLN6-221ENST00000637494 OR52E2Q8NGJ4 325 aa16.06■□□□□ 0.16
CLN6-221ENST00000637494 ZNF582Q96NG8 517 aaPredicted RBP16.06■□□□□ 0.16
CLN6-221ENST00000637494 CCT8L2Q96SF2 557 aa16.06■□□□□ 0.16
CLN6-221ENST00000637494 PITX2Q99697 317 aa16.06■□□□□ 0.16
CLN6-221ENST00000637494 C19orf24Q9BVV8 132 aa16.06■□□□□ 0.16
CLN6-221ENST00000637494 NPTNQ9Y639 398 aa16.06■□□□□ 0.16
CLN6-221ENST00000637494 LHFPL6Q9Y693 200 aa16.06■□□□□ 0.16
CLN6-221ENST00000637494 CDH10Q9Y6N8 788 aa16.06■□□□□ 0.16
CLN6-221ENST00000637494 DCTN6O00399 190 aa16.05■□□□□ 0.16
CLN6-221ENST00000637494 CCNB2O95067 398 aa16.05■□□□□ 0.16
CLN6-221ENST00000637494 GPANK1O95872 356 aa16.05■□□□□ 0.16
CLN6-221ENST00000637494 DBHP09172 617 aa16.05■□□□□ 0.16
CLN6-221ENST00000637494 ZNF823P16415 610 aa16.05■□□□□ 0.16
CLN6-221ENST00000637494 SELEP16581 610 aa16.05■□□□□ 0.16
CLN6-221ENST00000637494 GATA3P23771 443 aa16.05■□□□□ 0.16
CLN6-221ENST00000637494 HIST1H3AP68431 136 aa16.05■□□□□ 0.16
CLN6-221ENST00000637494 CLEC12AQ5QGZ9 265 aa16.05■□□□□ 0.16
CLN6-221ENST00000637494 SLC35F1Q5T1Q4 408 aa16.05■□□□□ 0.16
CLN6-221ENST00000637494 HIST2H3PS2Q5TEC6 136 aa16.05■□□□□ 0.16
CLN6-221ENST00000637494 DCAF12L2Q5VW00 463 aa16.05■□□□□ 0.16
CLN6-221ENST00000637494 CORO6Q6QEF8 472 aa16.05■□□□□ 0.16
CLN6-221ENST00000637494 FBXW12Q6X9E4 464 aa16.05■□□□□ 0.16
CLN6-221ENST00000637494 HIST2H3AQ71DI3 136 aa16.05■□□□□ 0.16
CLN6-221ENST00000637494 ZBTB46Q86UZ6 589 aa16.05■□□□□ 0.16
CLN6-221ENST00000637494 OR5AS1Q8N127 324 aa16.05■□□□□ 0.16
CLN6-221ENST00000637494 KLHL36Q8N4N3 616 aa16.05■□□□□ 0.16
CLN6-221ENST00000637494 SLC26A10Q8NG04 563 aa16.05■□□□□ 0.16
CLN6-221ENST00000637494 HCAR1Q9BXC0 346 aa16.05■□□□□ 0.16
CLN6-221ENST00000637494 TRIM15Q9C019 465 aa16.05■□□□□ 0.16
CLN6-221ENST00000637494 MAGIXQ9H6Y5 334 aa16.05■□□□□ 0.16
CLN6-221ENST00000637494 TMEM106BQ9NUM4 274 aa16.05■□□□□ 0.16
CLN6-221ENST00000637494 KCNG2Q9UJ96 466 aa16.05■□□□□ 0.16
CLN6-221ENST00000637494 PPP1R3CQ9UQK1 317 aa16.05■□□□□ 0.16
CLN6-221ENST00000637494 LYVE1Q9Y5Y7 322 aa16.05■□□□□ 0.16
CLN6-221ENST00000637494 COL6A5A8TX70 2615 aa16.04■□□□□ 0.16
CLN6-221ENST00000637494 A0A0A6YYJ9 748 aa16.04■□□□□ 0.16
CLN6-221ENST00000637494 J3QLI3 93 aa16.04■□□□□ 0.16
CLN6-221ENST00000637494 IFNL4K9M1U5 179 aa16.04■□□□□ 0.16
CLN6-221ENST00000637494 DEAF1O75398 565 aaPredicted RBP16.04■□□□□ 0.16
CLN6-221ENST00000637494 SBK2P0C263 348 aa16.04■□□□□ 0.16
CLN6-221ENST00000637494 CALB2P22676 271 aa16.04■□□□□ 0.16
CLN6-221ENST00000637494 HMGA2P52926 109 aa16.04■□□□□ 0.16
CLN6-221ENST00000637494 MALLQ13021 153 aa16.04■□□□□ 0.16
CLN6-221ENST00000637494 FAM98BQ52LJ0 330 aaKnown RBP16.04■□□□□ 0.16
CLN6-221ENST00000637494 ZNF771Q7L3S4 317 aaPredicted RBP16.04■□□□□ 0.16
CLN6-221ENST00000637494 LINC00346Q8IVM7 164 aa16.04■□□□□ 0.16
CLN6-221ENST00000637494 SPICQ8N5J4 248 aa16.04■□□□□ 0.16
CLN6-221ENST00000637494 FITM2Q8N6M3 262 aa16.04■□□□□ 0.16
CLN6-221ENST00000637494 CCDC197Q8NCU1 140 aa16.04■□□□□ 0.16
CLN6-221ENST00000637494 PROKR2Q8NFJ6 384 aa16.04■□□□□ 0.16
CLN6-221ENST00000637494 OR8G5Q8NG78 346 aa16.04■□□□□ 0.16
CLN6-221ENST00000637494 OR13G1Q8NGZ3 307 aa16.04■□□□□ 0.16
CLN6-221ENST00000637494 OR2T4Q8NH00 348 aa16.04■□□□□ 0.16
CLN6-221ENST00000637494 ITLN1Q8WWA0 313 aa16.04■□□□□ 0.16
CLN6-221ENST00000637494 LRGUKQ96M69 825 aa16.04■□□□□ 0.16
CLN6-221ENST00000637494 ATF6BQ99941 703 aa16.04■□□□□ 0.16
CLN6-221ENST00000637494 EGLN3Q9H6Z9 239 aa16.04■□□□□ 0.16
CLN6-221ENST00000637494 TBC1D23Q9NUY8 699 aa16.04■□□□□ 0.16
CLN6-221ENST00000637494 MXRA5Q9NR99 2828 aa16.04■□□□□ 0.16
CLN6-221ENST00000637494 OR6C68A6NDL8 312 aa16.03■□□□□ 0.16
CLN6-221ENST00000637494 ATP6V1B2P21281 511 aa16.03■□□□□ 0.16
CLN6-221ENST00000637494 SRP9P49458 86 aaKnown RBP16.03■□□□□ 0.16
CLN6-221ENST00000637494 HLXQ14774 488 aaPredicted RBP16.03■□□□□ 0.16
CLN6-221ENST00000637494 OR2T2Q6IF00 324 aa16.03■□□□□ 0.16
CLN6-221ENST00000637494 SLC18B1Q6NT16 456 aa16.03■□□□□ 0.16
CLN6-221ENST00000637494 Q6ZR03 302 aa16.03■□□□□ 0.16
CLN6-221ENST00000637494 RASSF6Q6ZTQ3 369 aa16.03■□□□□ 0.16
CLN6-221ENST00000637494 OR9Q2Q8NGE9 314 aa16.03■□□□□ 0.16
CLN6-221ENST00000637494 ZNF418Q8TF45 676 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms