RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 SEC61A2Q9H9S3 476 aa10.8□□□□□ -0.68
CLN8-212ENST00000637083 B3GNT2Q9NY97 397 aa10.8□□□□□ -0.68
CLN8-212ENST00000637083 MGAT4CQ9UBM8 478 aa10.8□□□□□ -0.68
CLN8-212ENST00000637083 FBXL2Q9UKC9 423 aa10.8□□□□□ -0.68
CLN8-212ENST00000637083 RAB22AQ9UL26 194 aa10.8□□□□□ -0.68
CLN8-212ENST00000637083 CHCHD2Q9Y6H1 151 aaPredicted RBP10.8□□□□□ -0.68
CLN8-212ENST00000637083 AQP7P3A6NL99 342 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 EIF1AYO14602 144 aaKnown RBP10.79□□□□□ -0.68
CLN8-212ENST00000637083 EIF1BO60739 113 aaKnown RBP10.79□□□□□ -0.68
CLN8-212ENST00000637083 TSC22D2O75157 780 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 VAMP5O95183 116 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 PMS2P2O95744 297 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 ACSM4P0C7M7 580 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 SPOCK1Q08629 439 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 PLA2G7Q13093 441 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 FAM189A2Q15884 450 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 KCNMB1Q16558 191 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 C6orf183Q5T699 404 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 ZBTB37Q5TC79 503 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 SLC25A47Q6Q0C1 308 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 CORO6Q6QEF8 472 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 SEZ6L2Q6UXD5 910 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 TMPPEQ6ZT21 453 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 NLRC3Q7RTR2 1065 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 GTPBP8Q8N3Z3 284 aaPredicted RBP10.79□□□□□ -0.68
CLN8-212ENST00000637083 SLC22A24Q8N4F4 322 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 WDSUB1Q8N9V3 476 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 METTL17Q9H7H0 456 aaPredicted RBP10.79□□□□□ -0.68
CLN8-212ENST00000637083 TMEM138Q9NPI0 162 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 EIF3KQ9UBQ5 218 aaKnown RBP10.79□□□□□ -0.68
CLN8-212ENST00000637083 GDF2Q9UK05 429 aaPredicted RBP10.79□□□□□ -0.68
CLN8-212ENST00000637083 PTRH2Q9Y3E5 179 aaKnown RBP10.79□□□□□ -0.68
CLN8-212ENST00000637083 MRPS18BQ9Y676 258 aaKnown RBP10.79□□□□□ -0.68
CLN8-212ENST00000637083 PI4KAP42356 2102 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 LDLRAD4O15165 306 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 TRAF3IP2O43734 574 aaPredicted RBP10.79□□□□□ -0.68
CLN8-212ENST00000637083 TTRP02766 147 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 MELTFP08582 738 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 RAB3AP20336 220 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 GNALP38405 381 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 GSK3AP49840 483 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 SSR4P51571 173 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 P2RY4P51582 365 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 DSCR4P56555 118 aaPredicted RBP10.79□□□□□ -0.68
CLN8-212ENST00000637083 PER3P56645 1201 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 ZP1P60852 638 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 GABREP78334 506 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 TMEM176BQ3YBM2 270 aaPredicted RBP10.79□□□□□ -0.68
CLN8-212ENST00000637083 Q6ZTK2 550 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 BMPERQ8N8U9 685 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 CLEC1AQ8NC01 280 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 OR1M1Q8NGA1 313 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 OR2I1PQ8NGU4 316 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 FAM46BQ96A09 425 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 FGGYQ96C11 551 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 ZC3H10Q96K80 434 aaKnown RBP10.79□□□□□ -0.68
CLN8-212ENST00000637083 IMMP1LQ96LU5 166 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 SLC25A21Q9BQT8 299 aaPredicted RBP10.79□□□□□ -0.68
CLN8-212ENST00000637083 SEC22CQ9BRL7 303 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 NAA11Q9BSU3 229 aaPredicted RBP10.79□□□□□ -0.68
CLN8-212ENST00000637083 ANGPTL4Q9BY76 406 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 ALX4Q9H161 411 aaPredicted RBP10.79□□□□□ -0.68
CLN8-212ENST00000637083 CGGBP1Q9UFW8 167 aaPredicted RBP10.79□□□□□ -0.68
CLN8-212ENST00000637083 PCDHGA5Q9Y5G8 931 aa10.79□□□□□ -0.68
CLN8-212ENST00000637083 TNRC6BQ9UPQ9 1833 aaKnown RBP10.78□□□□□ -0.68
CLN8-212ENST00000637083 A0A1W2PNR3 127 aa10.78□□□□□ -0.68
CLN8-212ENST00000637083 KDM4BO94953 1096 aa10.78□□□□□ -0.68
CLN8-212ENST00000637083 BPNT1O95861 308 aa10.78□□□□□ -0.68
CLN8-212ENST00000637083 CYB5AP00167 134 aa10.78□□□□□ -0.68
CLN8-212ENST00000637083 IFNA7P01567 189 aa10.78□□□□□ -0.68
CLN8-212ENST00000637083 RLN1P04808 185 aa10.78□□□□□ -0.68
CLN8-212ENST00000637083 ZNF20P17024 532 aa10.78□□□□□ -0.68
CLN8-212ENST00000637083 ANXA7P20073 488 aaKnown RBP10.78□□□□□ -0.68
CLN8-212ENST00000637083 EIF1AXP47813 144 aaKnown RBP10.78□□□□□ -0.68
CLN8-212ENST00000637083 GRB2P62993 217 aaKnown RBP10.78□□□□□ -0.68
CLN8-212ENST00000637083 ZFP36L1Q07352 338 aaKnown RBP10.78□□□□□ -0.68
CLN8-212ENST00000637083 HIST3H3Q16695 136 aa10.78□□□□□ -0.68
CLN8-212ENST00000637083 FAAP20Q6NZ36 180 aa10.78□□□□□ -0.68
CLN8-212ENST00000637083 TEX261Q6UWH6 196 aa10.78□□□□□ -0.68
CLN8-212ENST00000637083 PGAP1Q75T13 922 aa10.78□□□□□ -0.68
CLN8-212ENST00000637083 GABRG1Q8N1C3 465 aa10.78□□□□□ -0.68
CLN8-212ENST00000637083 OR2Y1Q8NGV0 311 aa10.78□□□□□ -0.68
CLN8-212ENST00000637083 SEH1LQ96EE3 360 aa10.78□□□□□ -0.68
CLN8-212ENST00000637083 NUDT16L1Q9BRJ7 211 aaKnown RBP10.78□□□□□ -0.68
CLN8-212ENST00000637083 TMEM185BQ9H7F4 350 aa10.78□□□□□ -0.68
CLN8-212ENST00000637083 AKIRIN1Q9H9L7 192 aaPredicted RBP10.78□□□□□ -0.68
CLN8-212ENST00000637083 SLC23A1Q9UHI7 598 aa10.78□□□□□ -0.68
CLN8-212ENST00000637083 ELF5Q9UKW6 265 aaPredicted RBP10.78□□□□□ -0.68
CLN8-212ENST00000637083 U3KQ87 197 aa10.78□□□□□ -0.68
CLN8-212ENST00000637083 PCNX3Q9H6A9 2034 aa10.78□□□□□ -0.68
CLN8-212ENST00000637083 PYCARD-AS1I3L0S3 204 aa10.77□□□□□ -0.68
CLN8-212ENST00000637083 TNFRSF10AO00220 468 aa10.77□□□□□ -0.68
CLN8-212ENST00000637083 RAB3DO95716 219 aa10.77□□□□□ -0.68
CLN8-212ENST00000637083 COX6A1P12074 109 aa10.77□□□□□ -0.68
CLN8-212ENST00000637083 SFTPDP35247 375 aa10.77□□□□□ -0.68
CLN8-212ENST00000637083 FOLR3P41439 243 aa10.77□□□□□ -0.68
CLN8-212ENST00000637083 SELENOPP49908 381 aa10.77□□□□□ -0.68
CLN8-212ENST00000637083 CSNK2A1P68400 391 aaPredicted RBP10.77□□□□□ -0.68
CLN8-212ENST00000637083 PMPCAQ10713 525 aa10.77□□□□□ -0.68
CLN8-212ENST00000637083 MEF2DQ14814 521 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms