RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 SCGB1D2O95969 90 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 WNT11O96014 354 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 MELTFP08582 738 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 NMBP08949 121 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 OR4E1P0C645 316 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 CXCL2P19875 107 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 CDKN2AP42771 156 aaKnown RBP3.58□□□□□ -1.84
SCN1A-214ENST00000637038 FBXW4P57775 412 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 UBE2MP61081 183 aaKnown RBP3.58□□□□□ -1.84
SCN1A-214ENST00000637038 SSTP61278 116 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 IGLV3-21P80748 117 aaPredicted RBP3.58□□□□□ -1.84
SCN1A-214ENST00000637038 MC2RQ01718 297 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 SCRN3Q0VDG4 424 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 FUT7Q11130 342 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 SHBQ15464 509 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 TOMM34Q15785 309 aaPredicted RBP3.58□□□□□ -1.84
SCN1A-214ENST00000637038 NNATQ16517 81 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 SGCBQ16585 318 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 MEP1BQ16820 701 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 CDNFQ49AH0 187 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 PHF19Q5T6S3 580 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 AWAT2Q6E213 333 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 MED25Q71SY5 747 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 LRRTM1Q86UE6 522 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 HMGB4Q8WW32 186 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 NANOS1Q8WY41 292 aaKnown RBP3.58□□□□□ -1.84
SCN1A-214ENST00000637038 ST8SIA2Q92186 375 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 NINJ1Q92982 152 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 ORAI1Q96D31 301 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 TOE1Q96GM8 510 aaKnown RBP3.58□□□□□ -1.84
SCN1A-214ENST00000637038 ZDHHC12Q96GR4 267 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 OR8D2Q9GZM6 311 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 SYT4Q9H2B2 425 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 GLRX2Q9NS18 164 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 LRIT1Q9P2V4 623 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 KLF2Q9Y5W3 355 aaPredicted RBP3.58□□□□□ -1.84
SCN1A-214ENST00000637038 FRYLO94915 3013 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 OTOL1A6NHN0 477 aaPredicted RBP3.58□□□□□ -1.84
SCN1A-214ENST00000637038 A8MVM7 634 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 C11orf98E9PRG8 122 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 BCAT2O15382 392 aaPredicted RBP3.58□□□□□ -1.84
SCN1A-214ENST00000637038 KLK10O43240 276 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 HCRTR1O43613 425 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 FOXS1O43638 330 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 ADAM11O75078 769 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 UPK3AO75631 287 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 SCO1O75880 301 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 HLA-AP01891 365 aaKnown RBP3.58□□□□□ -1.84
SCN1A-214ENST00000637038 F13BP05160 661 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 GIMD1P0DJR0 217 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 SLC25A4P12235 298 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 FSTP19883 344 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 CFPP27918 469 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 CCR5P51681 352 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 UBE2IP63279 158 aaKnown RBP3.58□□□□□ -1.84
SCN1A-214ENST00000637038 AIMP2Q13155 320 aaKnown RBP3.58□□□□□ -1.84
SCN1A-214ENST00000637038 C2orf76Q3KRA6 126 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 RTL6Q6ICC9 239 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 TMEM81Q6P7N7 255 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 HAGHLQ6PII5 290 aaPredicted RBP3.58□□□□□ -1.84
SCN1A-214ENST00000637038 PAPD4Q6PIY7 484 aaKnown RBP3.58□□□□□ -1.84
SCN1A-214ENST00000637038 DEGS2Q6QHC5 323 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 ZAR1Q86SH2 424 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 SPACA3Q8IXA5 215 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 MUC20Q8N307 709 aaPredicted RBP3.58□□□□□ -1.84
SCN1A-214ENST00000637038 GTPBP8Q8N3Z3 284 aaPredicted RBP3.58□□□□□ -1.84
SCN1A-214ENST00000637038 KCNRGQ8N5I3 272 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 RFLNBQ8N5W9 214 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 OR5M1Q8NGP8 315 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 OR2AJ1Q8NGZ0 328 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 GPX8Q8TED1 209 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 MARC2Q969Z3 335 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 KLHDC7BQ96G42 594 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 OR1F2PQ96R84 312 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 LMF1Q96S06 567 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 LPAR4Q99677 370 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 VRK1Q99986 396 aaPredicted RBP3.58□□□□□ -1.84
SCN1A-214ENST00000637038 URM1Q9BTM9 101 aaKnown RBP3.58□□□□□ -1.84
SCN1A-214ENST00000637038 TXNIPQ9H3M7 391 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 FRRS1LQ9P0K9 344 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 PIPOXQ9P0Z9 390 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 TINAGQ9UJW2 476 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 PILRBQ9UKJ0 227 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 FARSAQ9Y285 508 aaKnown RBP3.58□□□□□ -1.84
SCN1A-214ENST00000637038 MRPS2Q9Y399 296 aaKnown RBP3.58□□□□□ -1.84
SCN1A-214ENST00000637038 RAB19A4D1S5 217 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 PRSS37A4D1T9 235 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 OR5H14A6NHG9 310 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 ZNF208O43345 1280 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 SLC16A7O60669 478 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 SIX6O95475 246 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 MT-CO3P00414 261 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 CD3DP04234 171 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 CHRM2P08172 466 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 FGF2P09038 288 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 GSK3AP49840 483 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 MAP2K6P52564 334 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 NANOS3P60323 173 aaKnown RBP3.58□□□□□ -1.84
SCN1A-214ENST00000637038 ODF4Q2M2E3 257 aa3.58□□□□□ -1.84
SCN1A-214ENST00000637038 PRTGQ2VWP7 1150 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms