RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 SPACA9Q96E40 222 aaPredicted RBP10.32□□□□□ -0.76
CLN6-217ENST00000636964 MRPS24Q96EL2 167 aaKnown RBP10.32□□□□□ -0.76
CLN6-217ENST00000636964 IMMP1LQ96LU5 166 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 LRFN5Q96NI6 719 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 NMNAT2Q9BZQ4 307 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 TRIM36Q9NQ86 728 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 CA10Q9NS85 328 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 PADI1Q9ULC6 663 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 GSTK1Q9Y2Q3 226 aa10.32□□□□□ -0.76
CLN6-217ENST00000636964 LOC102723996A0A087X1L8 192 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 PLSCR5A0PG75 271 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 METTL21EPA6NDL7 271 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 NPIPB7O75200 414 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 SCAF4O95104 1147 aaKnown RBP10.31□□□□□ -0.76
CLN6-217ENST00000636964 AHSA1O95433 338 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 IGF2P01344 180 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 HLA-DOBP13765 273 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 PSMB10P40306 273 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 SPEM2Q0P670 501 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 OR7A5Q15622 319 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 TMEM255AQ5JRV8 349 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 IDNKQ5T6J7 187 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 LINC01590Q5TEZ4 76 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 SLC25A24Q6NUK1 477 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 MTFR2Q6P444 385 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 MZT2AQ6P582 158 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 C3P1Q6ZMU1 363 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 OR6V1Q8N148 313 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 OR13C5Q8NGS8 318 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 COQ8AQ8NI60 647 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 MED9Q9NWA0 146 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 ANKRD10Q9NXR5 420 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 GNG8Q9UK08 70 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 RNF24Q9Y225 148 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 NUBP2Q9Y5Y2 271 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 TUBAL3A6NHL2 446 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 TXNL1O43396 289 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 OR6A2O95222 327 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 HLA-DPB1P04440 258 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 ALDOBP05062 364 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 FBXO45P0C2W1 286 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 ACSM1Q08AH1 577 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 POU4F2Q12837 409 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 OR1S1Q8NH92 325 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 LOXL4Q96JB6 756 aa10.31□□□□□ -0.76
CLN6-217ENST00000636964 NSG1A0A0A6YYJ2 146 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 A0A1B0GVI7 797 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 A0A1W2PPK0 400 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 ANXA2P2A6NMY6 339 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 B4E171 279 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 KRBOX1C9JBD0 128 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 EFNA2O43921 213 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 EIF3GO75821 320 aaKnown RBP eCLIP10.3□□□□□ -0.76
CLN6-217ENST00000636964 MT-ND4P03905 459 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 BMI1P35226 326 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 DGCR2P98153 550 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 CLN3Q13286 438 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 ACKR1Q16570 336 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 ISXQ2M1V0 245 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 TEX30Q5JUR7 227 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 DHRS13Q6UX07 377 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 CHIAQ9BZP6 476 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 DPAGT1Q9H3H5 408 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 GLS2Q9UI32 602 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 WIF1Q9Y5W5 379 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 A0A1W2PNU3 283 aaPredicted RBP10.3□□□□□ -0.76
CLN6-217ENST00000636964 PDCD5O14737 125 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 SLC19A2O60779 497 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 GLCEO94923 617 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 FBP1P09467 338 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 OR2T7P0C7T2 308 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 OR2T27Q8NH04 317 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 STRADBQ9C0K7 418 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 ZNF700Q9H0M5 742 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 INPP5EQ9NRR6 644 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 CPAMD8Q8IZJ3 1885 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 PRR32B1ATL7 298 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 ABCD4O14678 606 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 GOSR1O95249 250 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 ZNF41P51814 821 aaPredicted RBP10.3□□□□□ -0.76
CLN6-217ENST00000636964 ACTC1P68032 377 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 ACTA1P68133 377 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 SGCBQ16585 318 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 C6orf15Q6UXA7 325 aaPredicted RBP10.3□□□□□ -0.76
CLN6-217ENST00000636964 OR10J5Q8NHC4 309 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 CT55Q8WUE5 264 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 PELI1Q96FA3 418 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 ELMOD3Q96FG2 381 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 CACNG6Q9BXT2 260 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 SLC6A5Q9Y345 797 aa10.3□□□□□ -0.76
CLN6-217ENST00000636964 PLPP3O14495 311 aa10.29□□□□□ -0.76
CLN6-217ENST00000636964 XKRYO14609 159 aa10.29□□□□□ -0.76
CLN6-217ENST00000636964 GATBO75879 557 aaKnown RBP10.29□□□□□ -0.76
CLN6-217ENST00000636964 DHODHQ02127 395 aa10.29□□□□□ -0.76
CLN6-217ENST00000636964 WDR73Q6P4I2 378 aa10.29□□□□□ -0.76
CLN6-217ENST00000636964 SAMD12Q8N8I0 201 aa10.29□□□□□ -0.76
CLN6-217ENST00000636964 POMGNT2Q8NAT1 580 aa10.29□□□□□ -0.76
CLN6-217ENST00000636964 ST8SIA1Q92185 356 aa10.29□□□□□ -0.76
CLN6-217ENST00000636964 JSRP1Q96MG2 331 aaPredicted RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 126.5 ms