RNA–Protein interactions for RNA: ENST00000636674.1

CLN6-215, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 2,005 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-215ENST00000636674 NUDT16L1Q9BRJ7 211 aaKnown RBP13.01□□□□□ -0.33
CLN6-215ENST00000636674 WWTR1Q9GZV5 400 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 RAB33BQ9H082 229 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 FBXO4Q9UKT5 387 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 RAB22AQ9UL26 194 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 COA3Q9Y2R0 106 aaPredicted RBP13.01□□□□□ -0.33
CLN6-215ENST00000636674 EMC9Q9Y3B6 208 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 NOP16Q9Y3C1 178 aaKnown RBP13.01□□□□□ -0.33
CLN6-215ENST00000636674 ALPK2Q86TB3 2170 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 DCDC2BA2VCK2 349 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 METTL21EPA6NDL7 271 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 TMEM235A6NFC5 223 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 C17orf51A8MQB3 221 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 MPTX1A8MV57 137 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 RAB27BO00194 218 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 SCGNO76038 276 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 ZNF28P17035 718 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 NR0B1P51843 470 aaKnown RBP13.01□□□□□ -0.33
CLN6-215ENST00000636674 ZP4Q12836 540 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 TDGQ13569 410 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 RNASE10Q5GAN6 216 aaKnown RBP13.01□□□□□ -0.33
CLN6-215ENST00000636674 HLA-DQA1Q5Y7H0 255 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 CORO6Q6QEF8 472 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 C17orf82Q86X59 251 aaPredicted RBP13.01□□□□□ -0.33
CLN6-215ENST00000636674 JAGN1Q8N5M9 183 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 ZNF441Q8N8Z8 693 aa13.01□□□□□ -0.33
CLN6-215ENST00000636674 WIPF3A6NGB9 483 aa13□□□□□ -0.33
CLN6-215ENST00000636674 TEX46H3BTG2 121 aa13□□□□□ -0.33
CLN6-215ENST00000636674 GMFGO60234 142 aa13□□□□□ -0.33
CLN6-215ENST00000636674 FADS1O60427 444 aa13□□□□□ -0.33
CLN6-215ENST00000636674 TBPP20226 339 aa13□□□□□ -0.33
CLN6-215ENST00000636674 CNR1P21554 472 aa13□□□□□ -0.33
CLN6-215ENST00000636674 HSD11B1P28845 292 aa13□□□□□ -0.33
CLN6-215ENST00000636674 SPOCK1Q08629 439 aa13□□□□□ -0.33
CLN6-215ENST00000636674 OR4D6Q8NGJ1 314 aa13□□□□□ -0.33
CLN6-215ENST00000636674 ASB10Q8WXI3 467 aa13□□□□□ -0.33
CLN6-215ENST00000636674 DAZLQ92904 295 aaKnown RBP13□□□□□ -0.33
CLN6-215ENST00000636674 MRGPRFQ96AM1 343 aa13□□□□□ -0.33
CLN6-215ENST00000636674 TGM7Q96PF1 710 aa13□□□□□ -0.33
CLN6-215ENST00000636674 VRK1Q99986 396 aaPredicted RBP13□□□□□ -0.33
CLN6-215ENST00000636674 NRSN2Q9GZP1 204 aa13□□□□□ -0.33
CLN6-215ENST00000636674 CYP8B1Q9UNU6 501 aa13□□□□□ -0.33
CLN6-215ENST00000636674 PCNX3Q9H6A9 2034 aa13□□□□□ -0.33
CLN6-215ENST00000636674 OR6C76A6NM76 312 aa13□□□□□ -0.33
CLN6-215ENST00000636674 DNASE2O00115 360 aaPredicted RBP13□□□□□ -0.33
CLN6-215ENST00000636674 ADAM10O14672 748 aa13□□□□□ -0.33
CLN6-215ENST00000636674 GP1BAP07359 652 aa13□□□□□ -0.33
CLN6-215ENST00000636674 IL32P24001 234 aa13□□□□□ -0.33
CLN6-215ENST00000636674 MAOBP27338 520 aa13□□□□□ -0.33
CLN6-215ENST00000636674 ABCD3P28288 659 aa13□□□□□ -0.33
CLN6-215ENST00000636674 GSK3AP49840 483 aa13□□□□□ -0.33
CLN6-215ENST00000636674 MMP16P51512 607 aa13□□□□□ -0.33
CLN6-215ENST00000636674 LUMP51884 338 aaPredicted RBP13□□□□□ -0.33
CLN6-215ENST00000636674 EFNA3P52797 238 aa13□□□□□ -0.33
CLN6-215ENST00000636674 SCGB2B2Q4G0G5 96 aa13□□□□□ -0.33
CLN6-215ENST00000636674 UQCC3Q6UW78 93 aa13□□□□□ -0.33
CLN6-215ENST00000636674 ZNF813Q6ZN06 617 aa13□□□□□ -0.33
CLN6-215ENST00000636674 FJX1Q86VR8 437 aa13□□□□□ -0.33
CLN6-215ENST00000636674 ESX1Q8N693 406 aa13□□□□□ -0.33
CLN6-215ENST00000636674 PPP1R1CQ8WVI7 109 aa13□□□□□ -0.33
CLN6-215ENST00000636674 FBXW5Q969U6 566 aa13□□□□□ -0.33
CLN6-215ENST00000636674 DNAJA3Q96EY1 480 aa13□□□□□ -0.33
CLN6-215ENST00000636674 TMEM185BQ9H7F4 350 aa13□□□□□ -0.33
CLN6-215ENST00000636674 FBLN5Q9UBX5 448 aa13□□□□□ -0.33
CLN6-215ENST00000636674 SLCO1B1Q9Y6L6 691 aa13□□□□□ -0.33
CLN6-215ENST00000636674 C9orf170A2RU37 121 aa12.99□□□□□ -0.33
CLN6-215ENST00000636674 CDC14CA4D256 554 aa12.99□□□□□ -0.33
CLN6-215ENST00000636674 EIF1AYO14602 144 aaKnown RBP12.99□□□□□ -0.33
CLN6-215ENST00000636674 BPNT1O95861 308 aa12.99□□□□□ -0.33
CLN6-215ENST00000636674 APOC3P02656 99 aa12.99□□□□□ -0.33
CLN6-215ENST00000636674 NME1P15531 152 aaKnown RBP12.99□□□□□ -0.33
CLN6-215ENST00000636674 ZNF823P16415 610 aa12.99□□□□□ -0.33
CLN6-215ENST00000636674 DLSTP36957 453 aa12.99□□□□□ -0.33
CLN6-215ENST00000636674 EIF1AXP47813 144 aaKnown RBP12.99□□□□□ -0.33
CLN6-215ENST00000636674 OR1D4P47884 311 aa12.99□□□□□ -0.33
CLN6-215ENST00000636674 STARP49675 285 aa12.99□□□□□ -0.33
CLN6-215ENST00000636674 QRFPP83859 136 aa12.99□□□□□ -0.33
CLN6-215ENST00000636674 ZP2Q05996 745 aa12.99□□□□□ -0.33
CLN6-215ENST00000636674 PAN3Q58A45 887 aaKnown RBP12.99□□□□□ -0.33
CLN6-215ENST00000636674 OR10K2Q6IF99 312 aa12.99□□□□□ -0.33
CLN6-215ENST00000636674 LRFN4Q6PJG9 635 aa12.99□□□□□ -0.33
CLN6-215ENST00000636674 ATRAIDQ6UW56 229 aa12.99□□□□□ -0.33
CLN6-215ENST00000636674 C17orf107Q6ZR85 190 aa12.99□□□□□ -0.33
CLN6-215ENST00000636674 TTLL10Q6ZVT0 673 aa12.99□□□□□ -0.33
CLN6-215ENST00000636674 DCXRQ7Z4W1 244 aa12.99□□□□□ -0.33
CLN6-215ENST00000636674 GKN2Q86XP6 184 aa12.99□□□□□ -0.33
CLN6-215ENST00000636674 IQCF2Q8IXL9 164 aa12.99□□□□□ -0.33
CLN6-215ENST00000636674 CCDC36Q8IYA8 594 aa12.99□□□□□ -0.33
CLN6-215ENST00000636674 DTWD2Q8NBA8 298 aa12.99□□□□□ -0.33
CLN6-215ENST00000636674 OR1N1Q8NGS0 311 aa12.99□□□□□ -0.33
CLN6-215ENST00000636674 RNF133Q8WVZ7 376 aa12.99□□□□□ -0.33
CLN6-215ENST00000636674 FAM46BQ96A09 425 aa12.99□□□□□ -0.33
CLN6-215ENST00000636674 UQCC2Q9BRT2 126 aa12.99□□□□□ -0.33
CLN6-215ENST00000636674 PDCD10Q9BUL8 212 aa12.99□□□□□ -0.33
CLN6-215ENST00000636674 CST11Q9H112 138 aa12.99□□□□□ -0.33
CLN6-215ENST00000636674 PIGMQ9H3S5 423 aa12.99□□□□□ -0.33
CLN6-215ENST00000636674 FARSAQ9Y285 508 aaKnown RBP12.99□□□□□ -0.33
CLN6-215ENST00000636674 HRH3Q9Y5N1 445 aa12.99□□□□□ -0.33
CLN6-215ENST00000636674 BDP1A6H8Y1 2624 aa12.99□□□□□ -0.33
CLN6-215ENST00000636674 DNAH14Q0VDD8 3507 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms