RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 ZNF346Q9UL40 294 aaKnown RBP16.25■□□□□ 0.19
CACNA1A-227ENST00000636549 SNAPINO95295 136 aa16.25■□□□□ 0.19
CACNA1A-227ENST00000636549 FGF7P21781 194 aa16.25■□□□□ 0.19
CACNA1A-227ENST00000636549 OR10K2Q6IF99 312 aa16.25■□□□□ 0.19
CACNA1A-227ENST00000636549 LRRC56Q8IYG6 542 aaPredicted RBP16.25■□□□□ 0.19
CACNA1A-227ENST00000636549 PARP16Q8N5Y8 322 aa16.25■□□□□ 0.19
CACNA1A-227ENST00000636549 SARAFQ96BY9 339 aa16.25■□□□□ 0.19
CACNA1A-227ENST00000636549 P2RX6O15547 441 aa16.25■□□□□ 0.19
CACNA1A-227ENST00000636549 NRASP01111 189 aa16.25■□□□□ 0.19
CACNA1A-227ENST00000636549 SPP1P10451 314 aa16.25■□□□□ 0.19
CACNA1A-227ENST00000636549 TM4SF4P48230 202 aa16.25■□□□□ 0.19
CACNA1A-227ENST00000636549 RPS27AP62979 156 aaKnown RBP16.25■□□□□ 0.19
CACNA1A-227ENST00000636549 UBA52P62987 128 aaKnown RBP16.25■□□□□ 0.19
CACNA1A-227ENST00000636549 CMTM4Q8IZR5 234 aa16.25■□□□□ 0.19
CACNA1A-227ENST00000636549 C1orf87Q8N0U7 546 aa16.25■□□□□ 0.19
CACNA1A-227ENST00000636549 SLC16A11Q8NCK7 471 aa16.25■□□□□ 0.19
CACNA1A-227ENST00000636549 FAM212BQ9NTI7 297 aaPredicted RBP16.25■□□□□ 0.19
CACNA1A-227ENST00000636549 SLCO2B1O94956 709 aa16.25■□□□□ 0.19
CACNA1A-227ENST00000636549 GABARAPL2P60520 117 aa16.25■□□□□ 0.19
CACNA1A-227ENST00000636549 AK3Q9UIJ7 227 aa16.25■□□□□ 0.19
CACNA1A-227ENST00000636549 GPR55Q9Y2T6 319 aaPredicted RBP16.25■□□□□ 0.19
CACNA1A-227ENST00000636549 H3BP45 60 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 GPANK1O95872 356 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 GPX3P22352 226 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 LCN8Q6JVE9 175 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 GUSBP11Q6P575 273 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 OR13C5Q8NGS8 318 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 OR2AE1Q8NHA4 323 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 ERGIC1Q969X5 290 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 FAM3DQ96BQ1 224 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 ICAM5Q9UMF0 924 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 LRRC3CA6NJW4 275 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 EIF1P41567 113 aaKnown RBP16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 C1orf220Q5T0J3 134 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 TMEM88Q6PEY1 159 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 C20orf196Q8IYI0 205 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 DYNLRB2Q8TF09 96 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 DHRS4Q9BTZ2 278 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 NRIP3Q9NQ35 241 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 NALCNQ8IZF0 1738 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 A0A0B4J203 849 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 METTL15P1P0C7V9 234 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 LILRB1Q8NHL6 650 aaPredicted RBP16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 ZNF420Q8TAQ5 688 aaPredicted RBP16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 NUDT9Q9BW91 350 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 PECRQ9BY49 303 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 FGF22Q9HCT0 170 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 UBE2L5PA0A1B0GUS4 154 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 ZGLP1P0C6A0 271 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 SPCS2Q15005 226 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 RPL22L1Q6P5R6 122 aaKnown RBP16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 BTNL3Q6UXE8 466 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 PTPMT1Q8WUK0 201 aaPredicted RBP16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 TAF9BQ9HBM6 251 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 CLDN24A6NM45 220 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 KCNG3Q8TAE7 436 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 HSD17B10Q99714 261 aaKnown RBP16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 ZNF436Q9C0F3 470 aaPredicted RBP16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 CLMPQ9H6B4 373 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 PIK3C2AO00443 1686 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 IGKV3D-11A0A0A0MRZ8 115 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 IGHV3-21A0A0B4J1V1 117 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 IGKV3-11P04433 115 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 DUSP5Q16690 384 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 CLVS2Q5SYC1 327 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 STEAP1BQ6NZ63 245 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 ORAI1Q96D31 301 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 SHISA4Q96DD7 197 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 LURAP1Q96LR2 239 aa16.24■□□□□ 0.19
CACNA1A-227ENST00000636549 GPR171O14626 319 aa16.23■□□□□ 0.19
CACNA1A-227ENST00000636549 ZNF141Q15928 474 aa16.23■□□□□ 0.19
CACNA1A-227ENST00000636549 PROX2Q3B8N5 592 aa16.23■□□□□ 0.19
CACNA1A-227ENST00000636549 SLC2A9Q9NRM0 540 aa16.23■□□□□ 0.19
CACNA1A-227ENST00000636549 UGT2A1Q9Y4X1 527 aa16.23■□□□□ 0.19
CACNA1A-227ENST00000636549 DRGXA6NNA5 263 aa16.23■□□□□ 0.19
CACNA1A-227ENST00000636549 DCTN6O00399 190 aa16.23■□□□□ 0.19
CACNA1A-227ENST00000636549 ARR3P36575 388 aa16.23■□□□□ 0.19
CACNA1A-227ENST00000636549 CSNK1DP48730 415 aa16.23■□□□□ 0.19
CACNA1A-227ENST00000636549 CLDN22Q8N7P3 220 aa16.23■□□□□ 0.19
CACNA1A-227ENST00000636549 ZNHIT1O43257 154 aa16.23■□□□□ 0.19
CACNA1A-227ENST00000636549 HES3Q5TGS1 186 aa16.23■□□□□ 0.19
CACNA1A-227ENST00000636549 TCTN3Q6NUS6 607 aa16.23■□□□□ 0.19
CACNA1A-227ENST00000636549 FER1L6Q2WGJ9 1857 aa16.23■□□□□ 0.19
CACNA1A-227ENST00000636549 CTDSP2O14595 271 aa16.23■□□□□ 0.19
CACNA1A-227ENST00000636549 RBP2P50120 134 aa16.23■□□□□ 0.19
CACNA1A-227ENST00000636549 OR52I1Q8NGK6 324 aa16.23■□□□□ 0.19
CACNA1A-227ENST00000636549 ZNF764Q96H86 408 aaPredicted RBP16.23■□□□□ 0.19
CACNA1A-227ENST00000636549 BMPR1BO00238 502 aa16.23■□□□□ 0.19
CACNA1A-227ENST00000636549 FAM189A1O60320 539 aa16.23■□□□□ 0.19
CACNA1A-227ENST00000636549 TNFSF8P32971 234 aa16.23■□□□□ 0.19
CACNA1A-227ENST00000636549 SPNS2Q8IVW8 549 aa16.23■□□□□ 0.19
CACNA1A-227ENST00000636549 FGF14Q92915 247 aa16.23■□□□□ 0.19
CACNA1A-227ENST00000636549 SLAMF6Q96DU3 332 aa16.23■□□□□ 0.19
CACNA1A-227ENST00000636549 SMIM12Q96EX1 92 aa16.23■□□□□ 0.19
CACNA1A-227ENST00000636549 DPH3P1Q9H4G8 78 aa16.23■□□□□ 0.19
CACNA1A-227ENST00000636549 CLEC2DQ9UHP7 191 aa16.23■□□□□ 0.19
CACNA1A-227ENST00000636549 ZNF716A6NP11 495 aa16.22■□□□□ 0.19
CACNA1A-227ENST00000636549 CLEC2LP0C7M8 214 aa16.22■□□□□ 0.19
CACNA1A-227ENST00000636549 TRAPPC2P0DI81 140 aa16.22■□□□□ 0.19
CACNA1A-227ENST00000636549 TRAPPC2BP0DI82 140 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms