RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 APOBEC3DQ96AK3 386 aaPredicted RBP16.08■□□□□ 0.16
CLN6-213ENST00000636212 NSL1Q96IY1 281 aa16.08■□□□□ 0.16
CLN6-213ENST00000636212 TSSK2Q96PF2 358 aa16.08■□□□□ 0.16
CLN6-213ENST00000636212 MUC13Q9H3R2 512 aa16.08■□□□□ 0.16
CLN6-213ENST00000636212 OCEL1Q9H607 264 aa16.08■□□□□ 0.16
CLN6-213ENST00000636212 RPRD1BQ9NQG5 326 aaKnown RBP16.08■□□□□ 0.16
CLN6-213ENST00000636212 ATRQ13535 2644 aa16.07■□□□□ 0.16
CLN6-213ENST00000636212 A0A0G2JMP0 313 aa16.07■□□□□ 0.16
CLN6-213ENST00000636212 A0A0X1KG70 313 aa16.07■□□□□ 0.16
CLN6-213ENST00000636212 UBOX5O94941 541 aa16.07■□□□□ 0.16
CLN6-213ENST00000636212 IGHV2-5P01817 119 aa16.07■□□□□ 0.16
CLN6-213ENST00000636212 KRTAP24-1Q3LI83 254 aa16.07■□□□□ 0.16
CLN6-213ENST00000636212 TMEM255AQ5JRV8 349 aa16.07■□□□□ 0.16
CLN6-213ENST00000636212 SLC27A4Q6P1M0 643 aa16.07■□□□□ 0.16
CLN6-213ENST00000636212 ZNF620Q6ZNG0 422 aa16.07■□□□□ 0.16
CLN6-213ENST00000636212 OR6V1Q8N148 313 aa16.07■□□□□ 0.16
CLN6-213ENST00000636212 OR4M2Q8NGB6 313 aa16.07■□□□□ 0.16
CLN6-213ENST00000636212 SLC7A6Q92536 515 aa16.07■□□□□ 0.16
CLN6-213ENST00000636212 POFUT1Q9H488 388 aa16.07■□□□□ 0.16
CLN6-213ENST00000636212 METTL17Q9H7H0 456 aaPredicted RBP16.07■□□□□ 0.16
CLN6-213ENST00000636212 UBAP1Q9NZ09 502 aa16.07■□□□□ 0.16
CLN6-213ENST00000636212 PTTG3PQ9NZH4 202 aa16.07■□□□□ 0.16
CLN6-213ENST00000636212 IL19Q9UHD0 177 aa16.07■□□□□ 0.16
CLN6-213ENST00000636212 PCDHB10Q9UN67 800 aa16.07■□□□□ 0.16
CLN6-213ENST00000636212 IGLV1-36A0A0B4J1U3 117 aa16.06■□□□□ 0.16
CLN6-213ENST00000636212 PLPP2O43688 288 aa16.06■□□□□ 0.16
CLN6-213ENST00000636212 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.06■□□□□ 0.16
CLN6-213ENST00000636212 COX10Q12887 443 aa16.06■□□□□ 0.16
CLN6-213ENST00000636212 ECH1Q13011 328 aa16.06■□□□□ 0.16
CLN6-213ENST00000636212 MEP1BQ16820 701 aa16.06■□□□□ 0.16
CLN6-213ENST00000636212 PGBD2Q6P3X8 592 aa16.06■□□□□ 0.16
CLN6-213ENST00000636212 DHFR2Q86XF0 187 aa16.06■□□□□ 0.16
CLN6-213ENST00000636212 ATG16L2Q8NAA4 619 aa16.06■□□□□ 0.16
CLN6-213ENST00000636212 SDR9C7Q8NEX9 313 aa16.06■□□□□ 0.16
CLN6-213ENST00000636212 OR52E2Q8NGJ4 325 aa16.06■□□□□ 0.16
CLN6-213ENST00000636212 ZNF582Q96NG8 517 aaPredicted RBP16.06■□□□□ 0.16
CLN6-213ENST00000636212 CCT8L2Q96SF2 557 aa16.06■□□□□ 0.16
CLN6-213ENST00000636212 PITX2Q99697 317 aa16.06■□□□□ 0.16
CLN6-213ENST00000636212 C19orf24Q9BVV8 132 aa16.06■□□□□ 0.16
CLN6-213ENST00000636212 NPTNQ9Y639 398 aa16.06■□□□□ 0.16
CLN6-213ENST00000636212 LHFPL6Q9Y693 200 aa16.06■□□□□ 0.16
CLN6-213ENST00000636212 CDH10Q9Y6N8 788 aa16.06■□□□□ 0.16
CLN6-213ENST00000636212 DCTN6O00399 190 aa16.05■□□□□ 0.16
CLN6-213ENST00000636212 CCNB2O95067 398 aa16.05■□□□□ 0.16
CLN6-213ENST00000636212 GPANK1O95872 356 aa16.05■□□□□ 0.16
CLN6-213ENST00000636212 DBHP09172 617 aa16.05■□□□□ 0.16
CLN6-213ENST00000636212 ZNF823P16415 610 aa16.05■□□□□ 0.16
CLN6-213ENST00000636212 SELEP16581 610 aa16.05■□□□□ 0.16
CLN6-213ENST00000636212 GATA3P23771 443 aa16.05■□□□□ 0.16
CLN6-213ENST00000636212 HIST1H3AP68431 136 aa16.05■□□□□ 0.16
CLN6-213ENST00000636212 CLEC12AQ5QGZ9 265 aa16.05■□□□□ 0.16
CLN6-213ENST00000636212 SLC35F1Q5T1Q4 408 aa16.05■□□□□ 0.16
CLN6-213ENST00000636212 HIST2H3PS2Q5TEC6 136 aa16.05■□□□□ 0.16
CLN6-213ENST00000636212 DCAF12L2Q5VW00 463 aa16.05■□□□□ 0.16
CLN6-213ENST00000636212 CORO6Q6QEF8 472 aa16.05■□□□□ 0.16
CLN6-213ENST00000636212 FBXW12Q6X9E4 464 aa16.05■□□□□ 0.16
CLN6-213ENST00000636212 HIST2H3AQ71DI3 136 aa16.05■□□□□ 0.16
CLN6-213ENST00000636212 ZBTB46Q86UZ6 589 aa16.05■□□□□ 0.16
CLN6-213ENST00000636212 OR5AS1Q8N127 324 aa16.05■□□□□ 0.16
CLN6-213ENST00000636212 KLHL36Q8N4N3 616 aa16.05■□□□□ 0.16
CLN6-213ENST00000636212 SLC26A10Q8NG04 563 aa16.05■□□□□ 0.16
CLN6-213ENST00000636212 HCAR1Q9BXC0 346 aa16.05■□□□□ 0.16
CLN6-213ENST00000636212 TRIM15Q9C019 465 aa16.05■□□□□ 0.16
CLN6-213ENST00000636212 MAGIXQ9H6Y5 334 aa16.05■□□□□ 0.16
CLN6-213ENST00000636212 TMEM106BQ9NUM4 274 aa16.05■□□□□ 0.16
CLN6-213ENST00000636212 KCNG2Q9UJ96 466 aa16.05■□□□□ 0.16
CLN6-213ENST00000636212 PPP1R3CQ9UQK1 317 aa16.05■□□□□ 0.16
CLN6-213ENST00000636212 LYVE1Q9Y5Y7 322 aa16.05■□□□□ 0.16
CLN6-213ENST00000636212 COL6A5A8TX70 2615 aa16.04■□□□□ 0.16
CLN6-213ENST00000636212 A0A0A6YYJ9 748 aa16.04■□□□□ 0.16
CLN6-213ENST00000636212 J3QLI3 93 aa16.04■□□□□ 0.16
CLN6-213ENST00000636212 IFNL4K9M1U5 179 aa16.04■□□□□ 0.16
CLN6-213ENST00000636212 DEAF1O75398 565 aaPredicted RBP16.04■□□□□ 0.16
CLN6-213ENST00000636212 FAM107AO95990 144 aa16.04■□□□□ 0.16
CLN6-213ENST00000636212 SBK2P0C263 348 aa16.04■□□□□ 0.16
CLN6-213ENST00000636212 CALB2P22676 271 aa16.04■□□□□ 0.16
CLN6-213ENST00000636212 HMGA2P52926 109 aa16.04■□□□□ 0.16
CLN6-213ENST00000636212 MALLQ13021 153 aa16.04■□□□□ 0.16
CLN6-213ENST00000636212 FAM98BQ52LJ0 330 aaKnown RBP16.04■□□□□ 0.16
CLN6-213ENST00000636212 ZNF771Q7L3S4 317 aaPredicted RBP16.04■□□□□ 0.16
CLN6-213ENST00000636212 LINC00346Q8IVM7 164 aa16.04■□□□□ 0.16
CLN6-213ENST00000636212 SPICQ8N5J4 248 aa16.04■□□□□ 0.16
CLN6-213ENST00000636212 FITM2Q8N6M3 262 aa16.04■□□□□ 0.16
CLN6-213ENST00000636212 CCDC197Q8NCU1 140 aa16.04■□□□□ 0.16
CLN6-213ENST00000636212 PROKR2Q8NFJ6 384 aa16.04■□□□□ 0.16
CLN6-213ENST00000636212 OR8G5Q8NG78 346 aa16.04■□□□□ 0.16
CLN6-213ENST00000636212 OR13G1Q8NGZ3 307 aa16.04■□□□□ 0.16
CLN6-213ENST00000636212 OR2T4Q8NH00 348 aa16.04■□□□□ 0.16
CLN6-213ENST00000636212 ITLN1Q8WWA0 313 aa16.04■□□□□ 0.16
CLN6-213ENST00000636212 LRGUKQ96M69 825 aa16.04■□□□□ 0.16
CLN6-213ENST00000636212 ATF6BQ99941 703 aa16.04■□□□□ 0.16
CLN6-213ENST00000636212 EGLN3Q9H6Z9 239 aa16.04■□□□□ 0.16
CLN6-213ENST00000636212 TBC1D23Q9NUY8 699 aa16.04■□□□□ 0.16
CLN6-213ENST00000636212 MXRA5Q9NR99 2828 aa16.04■□□□□ 0.16
CLN6-213ENST00000636212 OR6C68A6NDL8 312 aa16.03■□□□□ 0.16
CLN6-213ENST00000636212 ATP6V1B2P21281 511 aa16.03■□□□□ 0.16
CLN6-213ENST00000636212 SRP9P49458 86 aaKnown RBP16.03■□□□□ 0.16
CLN6-213ENST00000636212 HLXQ14774 488 aaPredicted RBP16.03■□□□□ 0.16
CLN6-213ENST00000636212 OR2T2Q6IF00 324 aa16.03■□□□□ 0.16
CLN6-213ENST00000636212 SLC18B1Q6NT16 456 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms