RNA–Protein interactions for RNA: ENST00000635682.1

HSPG2-214, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-214ENST00000635682 SPARCP09486 303 aa12.71□□□□□ -0.37
HSPG2-214ENST00000635682 GAAP10253 952 aa12.71□□□□□ -0.37
HSPG2-214ENST00000635682 SPI1P17947 270 aa12.71□□□□□ -0.37
HSPG2-214ENST00000635682 TUBG1P23258 451 aa12.71□□□□□ -0.37
HSPG2-214ENST00000635682 PPP1CBP62140 327 aa12.71□□□□□ -0.37
HSPG2-214ENST00000635682 KLHL12Q53G59 568 aa12.71□□□□□ -0.37
HSPG2-214ENST00000635682 CORO6Q6QEF8 472 aa12.71□□□□□ -0.37
HSPG2-214ENST00000635682 PARP8Q8N3A8 854 aa12.71□□□□□ -0.37
HSPG2-214ENST00000635682 PAQR4Q8N4S7 273 aaPredicted RBP12.71□□□□□ -0.37
HSPG2-214ENST00000635682 ZNF525Q8N782 197 aa12.71□□□□□ -0.37
HSPG2-214ENST00000635682 OR51L1Q8NGJ5 315 aa12.71□□□□□ -0.37
HSPG2-214ENST00000635682 NEU4Q8WWR8 484 aaPredicted RBP12.71□□□□□ -0.37
HSPG2-214ENST00000635682 SPTSSAQ969W0 71 aa12.71□□□□□ -0.37
HSPG2-214ENST00000635682 RBM4BQ9BQ04 359 aaKnown RBP12.71□□□□□ -0.37
HSPG2-214ENST00000635682 RBM4Q9BWF3 364 aaKnown RBP12.71□□□□□ -0.37
HSPG2-214ENST00000635682 MRPL37Q9BZE1 423 aaKnown RBP12.71□□□□□ -0.37
HSPG2-214ENST00000635682 NTN4Q9HB63 628 aa12.71□□□□□ -0.37
HSPG2-214ENST00000635682 TUBG2Q9NRH3 451 aa12.71□□□□□ -0.37
HSPG2-214ENST00000635682 TVP23BQ9NYZ1 205 aa12.71□□□□□ -0.37
HSPG2-214ENST00000635682 LOC100509620A0A075B734 347 aa12.7□□□□□ -0.38
HSPG2-214ENST00000635682 LY6HO94772 140 aa12.7□□□□□ -0.38
HSPG2-214ENST00000635682 GYPBP06028 91 aa12.7□□□□□ -0.38
HSPG2-214ENST00000635682 ENTPD1P49961 510 aa12.7□□□□□ -0.38
HSPG2-214ENST00000635682 PDLIM4P50479 330 aa12.7□□□□□ -0.38
HSPG2-214ENST00000635682 TMEM249Q2WGJ8 235 aa12.7□□□□□ -0.38
HSPG2-214ENST00000635682 CHRFAM7AQ494W8 412 aa12.7□□□□□ -0.38
HSPG2-214ENST00000635682 ZMAT1Q5H9K5 638 aa12.7□□□□□ -0.38
HSPG2-214ENST00000635682 SPATA46Q5T0L3 261 aa12.7□□□□□ -0.38
HSPG2-214ENST00000635682 LCN1P1Q5VSP4 162 aa12.7□□□□□ -0.38
HSPG2-214ENST00000635682 OTPQ5XKR4 325 aa12.7□□□□□ -0.38
HSPG2-214ENST00000635682 FAHD1Q6P587 224 aa12.7□□□□□ -0.38
HSPG2-214ENST00000635682 OR6N2Q8NGY6 317 aa12.7□□□□□ -0.38
HSPG2-214ENST00000635682 FAM168AQ92567 244 aa12.7□□□□□ -0.38
HSPG2-214ENST00000635682 INTS14Q96SY0 518 aa12.7□□□□□ -0.38
HSPG2-214ENST00000635682 COQ7Q99807 217 aa12.7□□□□□ -0.38
HSPG2-214ENST00000635682 ATF6BQ99941 703 aa12.7□□□□□ -0.38
HSPG2-214ENST00000635682 GABARAPL1Q9H0R8 117 aa12.7□□□□□ -0.38
HSPG2-214ENST00000635682 SLC25A19Q9HC21 320 aa12.7□□□□□ -0.38
HSPG2-214ENST00000635682 TAAR3PQ9P1P4 343 aa12.7□□□□□ -0.38
HSPG2-214ENST00000635682 OAZ3Q9UMX2 235 aa12.7□□□□□ -0.38
HSPG2-214ENST00000635682 MALRD1Q5VYJ5 2156 aa12.7□□□□□ -0.38
HSPG2-214ENST00000635682 FAM183AA6NL82 134 aa12.69□□□□□ -0.38
HSPG2-214ENST00000635682 H3BSA7 217 aa12.69□□□□□ -0.38
HSPG2-214ENST00000635682 J3QW42 95 aa12.69□□□□□ -0.38
HSPG2-214ENST00000635682 SURF4O15260 269 aa12.69□□□□□ -0.38
HSPG2-214ENST00000635682 TIMM8AO60220 97 aaPredicted RBP12.69□□□□□ -0.38
HSPG2-214ENST00000635682 F12P00748 615 aaPredicted RBP12.69□□□□□ -0.38
HSPG2-214ENST00000635682 IFNA2P01563 188 aa12.69□□□□□ -0.38
HSPG2-214ENST00000635682 TFP02787 698 aa12.69□□□□□ -0.38
HSPG2-214ENST00000635682 GSTT1P30711 240 aa12.69□□□□□ -0.38
HSPG2-214ENST00000635682 ALDH3B1P43353 468 aa12.69□□□□□ -0.38
HSPG2-214ENST00000635682 SLC15A1P46059 708 aa12.69□□□□□ -0.38
HSPG2-214ENST00000635682 SLC6A9P48067 706 aa12.69□□□□□ -0.38
HSPG2-214ENST00000635682 DAPP51397 102 aa12.69□□□□□ -0.38
HSPG2-214ENST00000635682 TPTEP56180 551 aa12.69□□□□□ -0.38
HSPG2-214ENST00000635682 CDK5Q00535 292 aa12.69□□□□□ -0.38
HSPG2-214ENST00000635682 MALLQ13021 153 aa12.69□□□□□ -0.38
HSPG2-214ENST00000635682 MST1LQ2TV78 715 aa12.69□□□□□ -0.38
HSPG2-214ENST00000635682 CCDC92Q53HC0 331 aaPredicted RBP12.69□□□□□ -0.38
HSPG2-214ENST00000635682 PLBD1Q6P4A8 553 aa12.69□□□□□ -0.38
HSPG2-214ENST00000635682 SHFQ7M4L6 423 aa12.69□□□□□ -0.38
HSPG2-214ENST00000635682 ERI1Q8IV48 349 aaKnown RBP12.69□□□□□ -0.38
HSPG2-214ENST00000635682 SLC25A40Q8TBP6 338 aa12.69□□□□□ -0.38
HSPG2-214ENST00000635682 DOK1Q99704 481 aa12.69□□□□□ -0.38
HSPG2-214ENST00000635682 COPS4Q9BT78 406 aa12.69□□□□□ -0.38
HSPG2-214ENST00000635682 TPK1Q9H3S4 243 aa12.69□□□□□ -0.38
HSPG2-214ENST00000635682 RIBC2Q9H4K1 309 aa12.69□□□□□ -0.38
HSPG2-214ENST00000635682 CYSLTR2Q9NS75 346 aa12.69□□□□□ -0.38
HSPG2-214ENST00000635682 CENPMQ9NSP4 180 aa12.69□□□□□ -0.38
HSPG2-214ENST00000635682 TBCCD1Q9NVR7 557 aa12.69□□□□□ -0.38
HSPG2-214ENST00000635682 LHFPL6Q9Y693 200 aa12.69□□□□□ -0.38
HSPG2-214ENST00000635682 COMMD3-BMI1R4GMX3 469 aa12.69□□□□□ -0.38
HSPG2-214ENST00000635682 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.68□□□□□ -0.388e-9■■□□□ 11.4
HSPG2-214ENST00000635682 F5H5K5 113 aa12.68□□□□□ -0.38
HSPG2-214ENST00000635682 ZNF593O00488 134 aaPredicted RBP12.68□□□□□ -0.38
HSPG2-214ENST00000635682 PRODHO43272 600 aa12.68□□□□□ -0.38
HSPG2-214ENST00000635682 GLCEO94923 617 aa12.68□□□□□ -0.38
HSPG2-214ENST00000635682 BAG2O95816 211 aa12.68□□□□□ -0.38
HSPG2-214ENST00000635682 HSD11B1P28845 292 aa12.68□□□□□ -0.38
HSPG2-214ENST00000635682 LIPAP38571 399 aa12.68□□□□□ -0.38
HSPG2-214ENST00000635682 RAD23AP54725 363 aa12.68□□□□□ -0.38
HSPG2-214ENST00000635682 ERVS71-1P61550 626 aa12.68□□□□□ -0.38
HSPG2-214ENST00000635682 GABPB1Q06547 395 aaPredicted RBP12.68□□□□□ -0.38
HSPG2-214ENST00000635682 EIF2B1Q14232 305 aaKnown RBP12.68□□□□□ -0.38
HSPG2-214ENST00000635682 PTGES3Q15185 160 aaKnown RBP12.68□□□□□ -0.38
HSPG2-214ENST00000635682 ALKBH6Q3KRA9 238 aa12.68□□□□□ -0.38
HSPG2-214ENST00000635682 SLC35D3Q5M8T2 416 aa12.68□□□□□ -0.38
HSPG2-214ENST00000635682 C6orf52Q5T4I8 152 aa12.68□□□□□ -0.38
HSPG2-214ENST00000635682 TMEM236Q5W0B7 351 aa12.68□□□□□ -0.38
HSPG2-214ENST00000635682 SLC18B1Q6NT16 456 aa12.68□□□□□ -0.38
HSPG2-214ENST00000635682 ACSM5Q6NUN0 579 aa12.68□□□□□ -0.38
HSPG2-214ENST00000635682 DCXRQ7Z4W1 244 aa12.68□□□□□ -0.38
HSPG2-214ENST00000635682 CPOQ8IVL8 374 aa12.68□□□□□ -0.38
HSPG2-214ENST00000635682 PHC2Q8IXK0 858 aa12.68□□□□□ -0.38
HSPG2-214ENST00000635682 ZNF101Q8IZC7 436 aa12.68□□□□□ -0.38
HSPG2-214ENST00000635682 ZNF511Q8NB15 262 aa12.68□□□□□ -0.38
HSPG2-214ENST00000635682 APOBEC3DQ96AK3 386 aaPredicted RBP12.68□□□□□ -0.38
HSPG2-214ENST00000635682 SORCS2Q96PQ0 1159 aa12.68□□□□□ -0.38
HSPG2-214ENST00000635682 PIMREGQ9BSJ6 248 aa12.68□□□□□ -0.38
HSPG2-214ENST00000635682 OR2J1Q9GZK6 312 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms