RNA–Protein interactions for RNA: ENST00000634934.2

LINC00339-208, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,518 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-208ENST00000634934 CD300CQ08708 224 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 CDSNQ15517 529 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 STK11Q15831 433 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 MEP1BQ16820 701 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 SLC35D3Q5M8T2 416 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 KLHL24Q6TFL4 600 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 ZNF433Q8N7K0 673 aaPredicted RBP12.67□□□□□ -0.38
LINC00339-208ENST00000634934 ZNF485Q8NCK3 441 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 BARHL1Q9BZE3 327 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 KCNJ16Q9NPI9 418 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 POLE4Q9NR33 117 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 TMEM38BQ9NVV0 291 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 TBC1D24Q9ULP9 559 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 SF3B6Q9Y3B4 125 aaKnown RBP12.67□□□□□ -0.38
LINC00339-208ENST00000634934 CMAHPQ9Y471 501 aa12.67□□□□□ -0.38
LINC00339-208ENST00000634934 TRDV1A0A1B0GX56 115 aa12.66□□□□□ -0.38
LINC00339-208ENST00000634934 MYL12AP19105 171 aa12.66□□□□□ -0.38
LINC00339-208ENST00000634934 NPR2P20594 1047 aa12.66□□□□□ -0.38
LINC00339-208ENST00000634934 COX5AP20674 150 aa12.66□□□□□ -0.38
LINC00339-208ENST00000634934 IL32P24001 234 aa12.66□□□□□ -0.38
LINC00339-208ENST00000634934 DDOSTP39656 456 aa12.66□□□□□ -0.38
LINC00339-208ENST00000634934 CD79BP40259 229 aa12.66□□□□□ -0.38
LINC00339-208ENST00000634934 BLVRAP53004 296 aa12.66□□□□□ -0.38
LINC00339-208ENST00000634934 MRPS34P82930 218 aaKnown RBP12.66□□□□□ -0.38
LINC00339-208ENST00000634934 HSF2Q03933 536 aa12.66□□□□□ -0.38
LINC00339-208ENST00000634934 SCN1BQ07699 218 aa12.66□□□□□ -0.38
LINC00339-208ENST00000634934 FAM27E3Q08E93 113 aa12.66□□□□□ -0.38
LINC00339-208ENST00000634934 SFRP5Q5T4F7 317 aa12.66□□□□□ -0.38
LINC00339-208ENST00000634934 LINC01590Q5TEZ4 76 aa12.66□□□□□ -0.38
LINC00339-208ENST00000634934 STAC2Q6ZMT1 411 aa12.66□□□□□ -0.38
LINC00339-208ENST00000634934 BHLHA15Q7RTS1 189 aaPredicted RBP12.66□□□□□ -0.38
LINC00339-208ENST00000634934 LRRC18Q8N456 261 aa12.66□□□□□ -0.38
LINC00339-208ENST00000634934 ZNF808Q8N4W9 903 aaPredicted RBP12.66□□□□□ -0.38
LINC00339-208ENST00000634934 OR10H5Q8NGA6 315 aa12.66□□□□□ -0.38
LINC00339-208ENST00000634934 OR1K1Q8NGR3 316 aa12.66□□□□□ -0.38
LINC00339-208ENST00000634934 SSC4DQ8WTU2 575 aa12.66□□□□□ -0.38
LINC00339-208ENST00000634934 ITLN2Q8WWU7 325 aaPredicted RBP12.66□□□□□ -0.38
LINC00339-208ENST00000634934 C11orf40Q8WZ69 217 aa12.66□□□□□ -0.38
LINC00339-208ENST00000634934 KISS1RQ969F8 398 aaPredicted RBP12.66□□□□□ -0.38
LINC00339-208ENST00000634934 ZC3HAV1LQ96H79 300 aaKnown RBP12.66□□□□□ -0.38
LINC00339-208ENST00000634934 KCTD7Q96MP8 289 aa12.66□□□□□ -0.38
LINC00339-208ENST00000634934 RNF167Q9H6Y7 350 aa12.66□□□□□ -0.38
LINC00339-208ENST00000634934 EMC7Q9NPA0 242 aa12.66□□□□□ -0.38
LINC00339-208ENST00000634934 TXNL4BQ9NX01 149 aaKnown RBP12.66□□□□□ -0.38
LINC00339-208ENST00000634934 ELOVL5Q9NYP7 299 aa12.66□□□□□ -0.38
LINC00339-208ENST00000634934 DOPEY1Q5JWR5 2465 aa12.65□□□□□ -0.38
LINC00339-208ENST00000634934 USP9YO00507 2555 aaPredicted RBP12.65□□□□□ -0.38
LINC00339-208ENST00000634934 WIPF3A6NGB9 483 aa12.65□□□□□ -0.38
LINC00339-208ENST00000634934 CTDSP2O14595 271 aa12.65□□□□□ -0.38
LINC00339-208ENST00000634934 FARS2O95363 451 aaKnown RBP12.65□□□□□ -0.38
LINC00339-208ENST00000634934 TFP02787 698 aa12.65□□□□□ -0.38
LINC00339-208ENST00000634934 MRPL3P09001 348 aaKnown RBP12.65□□□□□ -0.38
LINC00339-208ENST00000634934 ZNF823P16415 610 aa12.65□□□□□ -0.38
LINC00339-208ENST00000634934 CD53P19397 219 aa12.65□□□□□ -0.38
LINC00339-208ENST00000634934 MSR1P21757 451 aa12.65□□□□□ -0.38
LINC00339-208ENST00000634934 ATP6V1E1P36543 226 aa12.65□□□□□ -0.38
LINC00339-208ENST00000634934 CAPZA2P47755 286 aa12.65□□□□□ -0.38
LINC00339-208ENST00000634934 DOC2BQ14184 412 aa12.65□□□□□ -0.38
LINC00339-208ENST00000634934 ZNF79Q15937 498 aa12.65□□□□□ -0.38
LINC00339-208ENST00000634934 HIKESHIQ53FT3 197 aa12.65□□□□□ -0.38
LINC00339-208ENST00000634934 CCDC92Q53HC0 331 aaPredicted RBP12.65□□□□□ -0.38
LINC00339-208ENST00000634934 ANKRD16Q6P6B7 361 aa12.65□□□□□ -0.38
LINC00339-208ENST00000634934 FOXL2NBQ6ZUU3 175 aa12.65□□□□□ -0.38
LINC00339-208ENST00000634934 SLC22A24Q8N4F4 322 aa12.65□□□□□ -0.38
LINC00339-208ENST00000634934 SLC26A10Q8NG04 563 aa12.65□□□□□ -0.38
LINC00339-208ENST00000634934 OR6F1Q8NGZ6 308 aa12.65□□□□□ -0.38
LINC00339-208ENST00000634934 OR52N1Q8NH53 320 aa12.65□□□□□ -0.38
LINC00339-208ENST00000634934 NABP1Q96AH0 204 aa12.65□□□□□ -0.38
LINC00339-208ENST00000634934 RNFT2Q96EX2 444 aa12.65□□□□□ -0.38
LINC00339-208ENST00000634934 LRRC46Q96FV0 321 aa12.65□□□□□ -0.38
LINC00339-208ENST00000634934 SOSTQ9BQB4 213 aa12.65□□□□□ -0.38
LINC00339-208ENST00000634934 NELFAQ9H3P2 528 aa12.65□□□□□ -0.38
LINC00339-208ENST00000634934 WDR76Q9H967 626 aa12.65□□□□□ -0.38
LINC00339-208ENST00000634934 MRPL22Q9NWU5 206 aaKnown RBP12.65□□□□□ -0.38
LINC00339-208ENST00000634934 CLEC2DQ9UHP7 191 aa12.65□□□□□ -0.38
LINC00339-208ENST00000634934 EXOGQ9Y2C4 368 aaKnown RBP12.65□□□□□ -0.38
LINC00339-208ENST00000634934 POLR1DQ9Y2S0 133 aa12.65□□□□□ -0.38
LINC00339-208ENST00000634934 DOPEY2Q9Y3R5 2298 aa12.65□□□□□ -0.38
LINC00339-208ENST00000634934 NCOA6Q14686 2063 aaPredicted RBP12.64□□□□□ -0.39
LINC00339-208ENST00000634934 FAM172BPA6NC97 362 aa12.64□□□□□ -0.39
LINC00339-208ENST00000634934 SELENOFO60613 162 aa12.64□□□□□ -0.39
LINC00339-208ENST00000634934 APOL3O95236 402 aa12.64□□□□□ -0.39
LINC00339-208ENST00000634934 CLDN14O95500 239 aa12.64□□□□□ -0.39
LINC00339-208ENST00000634934 IGHA1P01876 353 aa12.64□□□□□ -0.39
LINC00339-208ENST00000634934 OR8G3PP0DMU2 310 aa12.64□□□□□ -0.39
LINC00339-208ENST00000634934 SPNP16150 400 aa12.64□□□□□ -0.39
LINC00339-208ENST00000634934 AGAP20933 346 aa12.64□□□□□ -0.39
LINC00339-208ENST00000634934 NAA10P41227 235 aaPredicted RBP12.64□□□□□ -0.39
LINC00339-208ENST00000634934 MTNR1AP48039 350 aa12.64□□□□□ -0.39
LINC00339-208ENST00000634934 ADAM8P78325 824 aa12.64□□□□□ -0.39
LINC00339-208ENST00000634934 GABRA6Q16445 453 aa12.64□□□□□ -0.39
LINC00339-208ENST00000634934 DDI2Q5TDH0 399 aa12.64□□□□□ -0.39
LINC00339-208ENST00000634934 OR7E24Q6IFN5 339 aa12.64□□□□□ -0.39
LINC00339-208ENST00000634934 RDH10Q8IZV5 341 aa12.64□□□□□ -0.39
LINC00339-208ENST00000634934 OR51G2Q8NGK0 314 aa12.64□□□□□ -0.39
LINC00339-208ENST00000634934 BCL2L2Q92843 193 aaPredicted RBP12.64□□□□□ -0.39
LINC00339-208ENST00000634934 INTS14Q96SY0 518 aa12.64□□□□□ -0.39
LINC00339-208ENST00000634934 CNN2Q99439 309 aaKnown RBP12.64□□□□□ -0.39
LINC00339-208ENST00000634934 HDHD5Q9BXW7 423 aa12.64□□□□□ -0.39
LINC00339-208ENST00000634934 GSTK1Q9Y2Q3 226 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms