RNA–Protein interactions for RNA: ENST00000629179.1

PNKP-223, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 4

Gene PNKP, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-223ENST00000629179 CRLF1O75462 422 aa12.1□□□□□ -0.47
PNKP-223ENST00000629179 IGHV1-46P01743 117 aa12.1□□□□□ -0.47
PNKP-223ENST00000629179 MT-ND5P03915 603 aa12.1□□□□□ -0.47
PNKP-223ENST00000629179 GYPBP06028 91 aa12.1□□□□□ -0.47
PNKP-223ENST00000629179 TACSTD2P09758 323 aa12.1□□□□□ -0.47
PNKP-223ENST00000629179 ZNF16P17020 682 aaPredicted RBP12.1□□□□□ -0.47
PNKP-223ENST00000629179 HOXB6P17509 224 aaKnown RBP12.1□□□□□ -0.47
PNKP-223ENST00000629179 ACHEP22303 614 aa12.1□□□□□ -0.47
PNKP-223ENST00000629179 IL2RGP31785 369 aa12.1□□□□□ -0.47
PNKP-223ENST00000629179 GGT2P36268 569 aa12.1□□□□□ -0.47
PNKP-223ENST00000629179 RPS27P42677 84 aaKnown RBP12.1□□□□□ -0.47
PNKP-223ENST00000629179 CRMP1Q14194 572 aa12.1□□□□□ -0.47
PNKP-223ENST00000629179 PCGF3Q3KNV8 242 aa12.1□□□□□ -0.47
PNKP-223ENST00000629179 C6orf52Q5T4I8 152 aa12.1□□□□□ -0.47
PNKP-223ENST00000629179 SLC18B1Q6NT16 456 aa12.1□□□□□ -0.47
PNKP-223ENST00000629179 IQCF1Q8N6M8 205 aa12.1□□□□□ -0.47
PNKP-223ENST00000629179 PAPD5Q8NDF8 572 aaKnown RBP12.1□□□□□ -0.47
PNKP-223ENST00000629179 OR2T33Q8NG76 320 aa12.1□□□□□ -0.47
PNKP-223ENST00000629179 OR2AJ1Q8NGZ0 328 aa12.1□□□□□ -0.47
PNKP-223ENST00000629179 OR2T4Q8NH00 348 aa12.1□□□□□ -0.47
PNKP-223ENST00000629179 CMBLQ96DG6 245 aa12.1□□□□□ -0.47
PNKP-223ENST00000629179 PITX2Q99697 317 aa12.1□□□□□ -0.47
PNKP-223ENST00000629179 COQ7Q99807 217 aa12.1□□□□□ -0.47
PNKP-223ENST00000629179 SOX7Q9BT81 388 aa12.1□□□□□ -0.47
PNKP-223ENST00000629179 RBM4Q9BWF3 364 aaKnown RBP12.1□□□□□ -0.47
PNKP-223ENST00000629179 HDHD2Q9H0R4 259 aa12.1□□□□□ -0.47
PNKP-223ENST00000629179 YY1AP1Q9H869 796 aa12.1□□□□□ -0.47
PNKP-223ENST00000629179 CHODLQ9H9P2 273 aa12.1□□□□□ -0.47
PNKP-223ENST00000629179 DECR2Q9NUI1 292 aa12.1□□□□□ -0.47
PNKP-223ENST00000629179 NKIRAS2Q9NYR9 191 aa12.1□□□□□ -0.47
PNKP-223ENST00000629179 DNAJB9Q9UBS3 223 aa12.1□□□□□ -0.47
PNKP-223ENST00000629179 CYB5R1Q9UHQ9 305 aa12.1□□□□□ -0.47
PNKP-223ENST00000629179 ATPIF1Q9UII2 106 aa12.1□□□□□ -0.47
PNKP-223ENST00000629179 KLHL21Q9UJP4 597 aa12.1□□□□□ -0.47
PNKP-223ENST00000629179 PLSCR5A0PG75 271 aa12.09□□□□□ -0.47
PNKP-223ENST00000629179 H3BN98 237 aa12.09□□□□□ -0.47
PNKP-223ENST00000629179 TIMM8AO60220 97 aaPredicted RBP12.09□□□□□ -0.47
PNKP-223ENST00000629179 RP2O75695 350 aa12.09□□□□□ -0.47
PNKP-223ENST00000629179 ATP5HO75947 161 aa12.09□□□□□ -0.47
PNKP-223ENST00000629179 CLUP10909 449 aa12.09□□□□□ -0.47
PNKP-223ENST00000629179 ZNF823P16415 610 aa12.09□□□□□ -0.47
PNKP-223ENST00000629179 POU1F1P28069 291 aa12.09□□□□□ -0.47
PNKP-223ENST00000629179 GPR6P46095 362 aaPredicted RBP12.09□□□□□ -0.47
PNKP-223ENST00000629179 GZMKP49863 264 aa12.09□□□□□ -0.47
PNKP-223ENST00000629179 RASSF2P50749 326 aa12.09□□□□□ -0.47
PNKP-223ENST00000629179 MRPS11P82912 194 aaKnown RBP12.09□□□□□ -0.47
PNKP-223ENST00000629179 ZNF511Q8NB15 262 aa12.09□□□□□ -0.47
PNKP-223ENST00000629179 TEX47Q8TBZ9 253 aa12.09□□□□□ -0.47
PNKP-223ENST00000629179 MSI2Q96DH6 328 aaKnown RBP12.09□□□□□ -0.47
PNKP-223ENST00000629179 DCLRE1CQ96SD1 692 aaKnown RBP12.09□□□□□ -0.47
PNKP-223ENST00000629179 NMNAT2Q9BZQ4 307 aa12.09□□□□□ -0.47
PNKP-223ENST00000629179 MSL2Q9HCI7 577 aa12.09□□□□□ -0.47
PNKP-223ENST00000629179 PURGQ9UJV8 347 aaKnown RBP12.09□□□□□ -0.47
PNKP-223ENST00000629179 DOCK11Q5JSL3 2073 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 IGHV1-69-2A0A0G2JMI3 117 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 LOC100289279A0A1B0GTE1 492 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 RIIAD1A6NNX1 92 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 WNT9BO14905 357 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 PPIHO43447 177 aaKnown RBP12.08□□□□□ -0.48
PNKP-223ENST00000629179 TIPRLO75663 272 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 IFNGP01579 166 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 PSKH1P11801 424 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 SPI1P17947 270 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 TUBG1P23258 451 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 CRYBB2P43320 205 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 RGS6P49758 472 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 CHN2P52757 468 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 SLC25A1P53007 311 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 TMEM33P57088 247 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 HLXQ14774 488 aaPredicted RBP12.08□□□□□ -0.48
PNKP-223ENST00000629179 KRTAP21-3Q3LHN1 58 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 SPRNQ5BIV9 151 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 ACSM5Q6NUN0 579 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 USP51Q70EK9 711 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 NAA40Q86UY6 237 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 PRIMA1Q86XR5 153 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 OR10S1Q8NGN2 331 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 PTP4A1Q93096 173 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 APOBEC3DQ96AK3 386 aaPredicted RBP12.08□□□□□ -0.48
PNKP-223ENST00000629179 HAVCR1Q96D42 359 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 MAP6Q96JE9 813 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 COG8Q96MW5 612 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 HCAR1Q9BXC0 346 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 NARFLQ9H6Q4 476 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 MED20Q9H944 212 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 WDR76Q9H967 626 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 SAP30LQ9HAJ7 183 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 NTN4Q9HB63 628 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 PNRC2Q9NPJ4 139 aaKnown RBP12.08□□□□□ -0.48
PNKP-223ENST00000629179 TUBG2Q9NRH3 451 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 CMC2Q9NRP2 79 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 CYSLTR2Q9NS75 346 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 PTTG3PQ9NZH4 202 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 CACNG2Q9Y698 323 aa12.08□□□□□ -0.48
PNKP-223ENST00000629179 FAM183AA6NL82 134 aa12.07□□□□□ -0.48
PNKP-223ENST00000629179 F5H5K5 113 aa12.07□□□□□ -0.48
PNKP-223ENST00000629179 ADH4P08319 380 aa12.07□□□□□ -0.48
PNKP-223ENST00000629179 ACSM4P0C7M7 580 aa12.07□□□□□ -0.48
PNKP-223ENST00000629179 ANXA8P13928 327 aa12.07□□□□□ -0.48
PNKP-223ENST00000629179 KITLGP21583 273 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms