RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 MEGF11A6BM72 1044 aa11.06□□□□□ -0.64
SYNGAP1-207ENST00000628646 PLPP3O14495 311 aa11.06□□□□□ -0.64
SYNGAP1-207ENST00000628646 GSTT2P0CG29 244 aa11.06□□□□□ -0.64
SYNGAP1-207ENST00000628646 SPI1P17947 270 aa11.06□□□□□ -0.64
SYNGAP1-207ENST00000628646 PTGDSP41222 190 aa11.06□□□□□ -0.64
SYNGAP1-207ENST00000628646 SLC25A1P53007 311 aa11.06□□□□□ -0.64
SYNGAP1-207ENST00000628646 FAM189A2Q15884 450 aa11.06□□□□□ -0.64
SYNGAP1-207ENST00000628646 GLT8D1Q68CQ7 371 aa11.06□□□□□ -0.64
SYNGAP1-207ENST00000628646 LINGO2Q7L985 606 aa11.06□□□□□ -0.64
SYNGAP1-207ENST00000628646 GLCCI1Q86VQ1 547 aa11.06□□□□□ -0.64
SYNGAP1-207ENST00000628646 ZNF454Q8N9F8 522 aa11.06□□□□□ -0.64
SYNGAP1-207ENST00000628646 ZNF511Q8NB15 262 aa11.06□□□□□ -0.64
SYNGAP1-207ENST00000628646 TRMT10AQ8TBZ6 339 aaKnown RBP11.06□□□□□ -0.64
SYNGAP1-207ENST00000628646 TAAR6Q96RI8 345 aa11.06□□□□□ -0.64
SYNGAP1-207ENST00000628646 WDR76Q9H967 626 aa11.06□□□□□ -0.64
SYNGAP1-207ENST00000628646 CDH20Q9HBT6 801 aa11.06□□□□□ -0.64
SYNGAP1-207ENST00000628646 ST6GALNAC2Q9UJ37 374 aa11.06□□□□□ -0.64
SYNGAP1-207ENST00000628646 ING4Q9UNL4 249 aa11.06□□□□□ -0.64
SYNGAP1-207ENST00000628646 PSMD9O00233 223 aa11.06□□□□□ -0.64
SYNGAP1-207ENST00000628646 PMS2P2O95744 297 aa11.06□□□□□ -0.64
SYNGAP1-207ENST00000628646 TFP02787 698 aa11.06□□□□□ -0.64
SYNGAP1-207ENST00000628646 PTGER4P35408 488 aa11.06□□□□□ -0.64
SYNGAP1-207ENST00000628646 MADCAM1Q13477 382 aa11.06□□□□□ -0.64
SYNGAP1-207ENST00000628646 CEACAM16Q2WEN9 425 aa11.06□□□□□ -0.64
SYNGAP1-207ENST00000628646 RNFT1Q5M7Z0 435 aa11.06□□□□□ -0.64
SYNGAP1-207ENST00000628646 POC1BQ8TC44 478 aa11.06□□□□□ -0.64
SYNGAP1-207ENST00000628646 SLC25A44Q96H78 314 aaPredicted RBP11.06□□□□□ -0.64
SYNGAP1-207ENST00000628646 COA3Q9Y2R0 106 aaPredicted RBP11.06□□□□□ -0.64
SYNGAP1-207ENST00000628646 ABCA4P78363 2273 aa11.05□□□□□ -0.64
SYNGAP1-207ENST00000628646 F5H5K5 113 aa11.05□□□□□ -0.64
SYNGAP1-207ENST00000628646 PITPNBP48739 271 aa11.05□□□□□ -0.64
SYNGAP1-207ENST00000628646 IGFL3Q6UXB1 125 aa11.05□□□□□ -0.64
SYNGAP1-207ENST00000628646 DUSP18Q8NEJ0 188 aa11.05□□□□□ -0.64
SYNGAP1-207ENST00000628646 SLCO5A1Q9H2Y9 848 aa11.05□□□□□ -0.64
SYNGAP1-207ENST00000628646 HRH3Q9Y5N1 445 aa11.05□□□□□ -0.64
SYNGAP1-207ENST00000628646 ADAMTS20P59510 1910 aa11.05□□□□□ -0.64
SYNGAP1-207ENST00000628646 SUCLG1P53597 346 aaKnown RBP11.05□□□□□ -0.64
SYNGAP1-207ENST00000628646 FOXO1Q12778 655 aa11.05□□□□□ -0.64
SYNGAP1-207ENST00000628646 DMKNQ6E0U4 476 aaPredicted RBP11.05□□□□□ -0.64
SYNGAP1-207ENST00000628646 LRFN4Q6PJG9 635 aa11.05□□□□□ -0.64
SYNGAP1-207ENST00000628646 IZUMO1Q8IYV9 350 aa11.05□□□□□ -0.64
SYNGAP1-207ENST00000628646 FAM71CQ8NEG0 241 aa11.05□□□□□ -0.64
SYNGAP1-207ENST00000628646 S100A13Q99584 98 aa11.05□□□□□ -0.64
SYNGAP1-207ENST00000628646 WACQ9BTA9 647 aa11.05□□□□□ -0.64
SYNGAP1-207ENST00000628646 ECDO95905 644 aaPredicted RBP11.05□□□□□ -0.64
SYNGAP1-207ENST00000628646 ELK1P19419 428 aa11.05□□□□□ -0.64
SYNGAP1-207ENST00000628646 SOX2P48431 317 aa11.05□□□□□ -0.64
SYNGAP1-207ENST00000628646 LIX1LQ8IVB5 337 aa11.05□□□□□ -0.64
SYNGAP1-207ENST00000628646 SCMH1Q96GD3 660 aa11.05□□□□□ -0.64
SYNGAP1-207ENST00000628646 CRLF2Q9HC73 371 aa11.05□□□□□ -0.64
SYNGAP1-207ENST00000628646 INTS1Q8N201 2190 aaKnown RBP11.05□□□□□ -0.64
SYNGAP1-207ENST00000628646 OR14I1A6ND48 311 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 AQP8O94778 261 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 TRAPPC2P0DI81 140 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 TRAPPC2BP0DI82 140 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 RPS11P62280 158 aaKnown RBP eCLIP11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 TLE1Q04724 770 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 YIF1BQ5BJH7 314 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 FNDC7Q5VTL7 733 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 WFDC8Q8IUA0 241 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 LINC00346Q8IVM7 164 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 MED28Q9H204 178 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 PLEKHA1Q9HB21 404 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 GPN1Q9HCN4 374 aaPredicted RBP11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 COPZ2Q9P299 210 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 OR6C65A6NJZ3 312 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 AQP7P3A6NL99 342 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 AQP7O14520 342 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 LYZL6O75951 148 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 B4GALT1P15291 398 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 EIF2B1Q14232 305 aaKnown RBP11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 GGTLC2Q14390 218 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 ZNF239Q16600 458 aaKnown RBP11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 TMEM53Q6P2H8 277 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 ZNF704Q6ZNC4 412 aaPredicted RBP11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 RPS4Y2Q8TD47 263 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 TRIM63Q969Q1 353 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 ZCCHC4Q9H5U6 513 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 NGBQ9NPG2 151 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 KCNJ16Q9NPI9 418 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 NRIP3Q9NQ35 241 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 DHDHQ9UQ10 334 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 PRRC2CQ9Y520 2896 aaKnown RBP11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 MPDZO75970 2070 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 UBE2QL1A1L167 161 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 HMX3A6NHT5 357 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 LANCL1O43813 399 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 BGLAPP02818 100 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 HLA-DOBP13765 273 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 APLNRP35414 380 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 OR10A3P58181 314 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 SELENOVP59797 346 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 MRPS10P82664 201 aaKnown RBP11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 CEP78Q5JTW2 689 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 OR52N5Q8NH56 324 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 EMC7Q9NPA0 242 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 RBMX2Q9Y388 322 aaKnown RBP11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 IGKV1D-42A0A075B6H8 117 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 A0A1W2PPK0 400 aa11.04□□□□□ -0.64
SYNGAP1-207ENST00000628646 PRSS37A4D1T9 235 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms