RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 A0A1W2PPE3 182 aa12.66□□□□□ -0.38
LDB3-209ENST00000623056 MBTPS2O43462 519 aa12.66□□□□□ -0.38
LDB3-209ENST00000623056 OIP5O43482 229 aa12.66□□□□□ -0.38
LDB3-209ENST00000623056 PVRP15151 417 aa12.66□□□□□ -0.38
LDB3-209ENST00000623056 MYOGP15173 224 aa12.66□□□□□ -0.38
LDB3-209ENST00000623056 ST6GAL1P15907 406 aa12.66□□□□□ -0.38
LDB3-209ENST00000623056 LPAR6P43657 344 aa12.66□□□□□ -0.38
LDB3-209ENST00000623056 CENPAP49450 140 aa12.66□□□□□ -0.38
LDB3-209ENST00000623056 CCR4P51679 360 aa12.66□□□□□ -0.38
LDB3-209ENST00000623056 CYCSP99999 105 aaKnown RBP12.66□□□□□ -0.38
LDB3-209ENST00000623056 SGCAQ16586 387 aa12.66□□□□□ -0.38
LDB3-209ENST00000623056 C5orf46Q6UWT4 87 aa12.66□□□□□ -0.38
LDB3-209ENST00000623056 VITQ6UXI7 678 aa12.66□□□□□ -0.38
LDB3-209ENST00000623056 TMPRSS9Q7Z410 1059 aa12.66□□□□□ -0.38
LDB3-209ENST00000623056 TAF8Q7Z7C8 310 aa12.66□□□□□ -0.38
LDB3-209ENST00000623056 BCORP1Q8N888 145 aa12.66□□□□□ -0.38
LDB3-209ENST00000623056 BHLHE23Q8NDY6 225 aa12.66□□□□□ -0.38
LDB3-209ENST00000623056 ASB17Q8WXJ9 295 aa12.66□□□□□ -0.38
LDB3-209ENST00000623056 KTI12Q96EK9 354 aaPredicted RBP12.66□□□□□ -0.38
LDB3-209ENST00000623056 CDC6Q99741 560 aa12.66□□□□□ -0.38
LDB3-209ENST00000623056 NAA11Q9BSU3 229 aaPredicted RBP12.66□□□□□ -0.38
LDB3-209ENST00000623056 BCL2L14Q9BZR8 327 aa12.66□□□□□ -0.38
LDB3-209ENST00000623056 GDF2Q9UK05 429 aaPredicted RBP12.66□□□□□ -0.38
LDB3-209ENST00000623056 B9D1Q9UPM9 204 aa12.66□□□□□ -0.38
LDB3-209ENST00000623056 C9JQL5 133 aa12.65□□□□□ -0.38
LDB3-209ENST00000623056 SSX5O60225 188 aa12.65□□□□□ -0.38
LDB3-209ENST00000623056 CD5P06127 495 aa12.65□□□□□ -0.38
LDB3-209ENST00000623056 SPARCP09486 303 aa12.65□□□□□ -0.38
LDB3-209ENST00000623056 CT45A8P0DMV1 189 aa12.65□□□□□ -0.38
LDB3-209ENST00000623056 CT45A9P0DMV2 189 aa12.65□□□□□ -0.38
LDB3-209ENST00000623056 CPT2P23786 658 aa12.65□□□□□ -0.38
LDB3-209ENST00000623056 AKR1C3P42330 323 aa12.65□□□□□ -0.38
LDB3-209ENST00000623056 LSSP48449 732 aa12.65□□□□□ -0.38
LDB3-209ENST00000623056 CT45A2Q5DJT8 189 aa12.65□□□□□ -0.38
LDB3-209ENST00000623056 AWAT2Q6E213 333 aa12.65□□□□□ -0.38
LDB3-209ENST00000623056 ZNF704Q6ZNC4 412 aaPredicted RBP12.65□□□□□ -0.38
LDB3-209ENST00000623056 MDGA2Q7Z553 956 aa12.65□□□□□ -0.38
LDB3-209ENST00000623056 CATSPERDQ86XM0 798 aa12.65□□□□□ -0.38
LDB3-209ENST00000623056 ZNF761Q86XN6 746 aaPredicted RBP12.65□□□□□ -0.38
LDB3-209ENST00000623056 C7orf61Q8IZ16 206 aa12.65□□□□□ -0.38
LDB3-209ENST00000623056 OR4D6Q8NGJ1 314 aa12.65□□□□□ -0.38
LDB3-209ENST00000623056 PTX4Q96A99 478 aa12.65□□□□□ -0.38
LDB3-209ENST00000623056 OR2M4Q96R27 311 aa12.65□□□□□ -0.38
LDB3-209ENST00000623056 CCNL2Q96S94 520 aaPredicted RBP12.65□□□□□ -0.38
LDB3-209ENST00000623056 OR5AC2Q9NZP5 309 aa12.65□□□□□ -0.38
LDB3-209ENST00000623056 THAP10Q9P2Z0 257 aaPredicted RBP12.65□□□□□ -0.38
LDB3-209ENST00000623056 RPH3AQ9Y2J0 694 aaPredicted RBP12.65□□□□□ -0.38
LDB3-209ENST00000623056 RAB27BO00194 218 aa12.65□□□□□ -0.39
LDB3-209ENST00000623056 AGAP20933 346 aa12.65□□□□□ -0.39
LDB3-209ENST00000623056 S100PP25815 95 aa12.65□□□□□ -0.39
LDB3-209ENST00000623056 DNASE1L1P49184 302 aa12.65□□□□□ -0.39
LDB3-209ENST00000623056 RAB38P57729 211 aa12.65□□□□□ -0.39
LDB3-209ENST00000623056 HGFACQ04756 655 aa12.65□□□□□ -0.39
LDB3-209ENST00000623056 FABP9Q0Z7S8 132 aa12.65□□□□□ -0.39
LDB3-209ENST00000623056 SLC18B1Q6NT16 456 aa12.65□□□□□ -0.39
LDB3-209ENST00000623056 ZNF440Q8IYI8 595 aa12.65□□□□□ -0.39
LDB3-209ENST00000623056 MRPL43Q8N983 215 aaKnown RBP12.65□□□□□ -0.39
LDB3-209ENST00000623056 CHST4Q8NCG5 386 aa12.65□□□□□ -0.39
LDB3-209ENST00000623056 MARCH1Q8TCQ1 289 aa12.65□□□□□ -0.39
LDB3-209ENST00000623056 ZNF524Q96C55 264 aa12.65□□□□□ -0.39
LDB3-209ENST00000623056 GHRLQ9UBU3 117 aa12.65□□□□□ -0.39
LDB3-209ENST00000623056 WIF1Q9Y5W5 379 aa12.65□□□□□ -0.39
LDB3-209ENST00000623056 A0A1W2PQU0 124 aa12.64□□□□□ -0.39
LDB3-209ENST00000623056 PRSS38A1L453 326 aa12.64□□□□□ -0.39
LDB3-209ENST00000623056 FAM157AC9JC47 383 aa12.64□□□□□ -0.39
LDB3-209ENST00000623056 TGFBR3LH3BV60 316 aa12.64□□□□□ -0.39
LDB3-209ENST00000623056 K7EQS6 105 aa12.64□□□□□ -0.39
LDB3-209ENST00000623056 AGPAT2O15120 278 aa12.64□□□□□ -0.39
LDB3-209ENST00000623056 YKT6O15498 198 aa12.64□□□□□ -0.39
LDB3-209ENST00000623056 LRP3O75074 770 aa12.64□□□□□ -0.39
LDB3-209ENST00000623056 MED6O75586 246 aa12.64□□□□□ -0.39
LDB3-209ENST00000623056 KAT7O95251 611 aa12.64□□□□□ -0.39
LDB3-209ENST00000623056 PLGP00747 810 aaPredicted RBP12.64□□□□□ -0.39
LDB3-209ENST00000623056 RCC1P18754 421 aaPredicted RBP12.64□□□□□ -0.39
LDB3-209ENST00000623056 CD80P33681 288 aa12.64□□□□□ -0.39
LDB3-209ENST00000623056 RPS21P63220 83 aaKnown RBP12.64□□□□□ -0.39
LDB3-209ENST00000623056 ROM1Q03395 351 aa12.64□□□□□ -0.39
LDB3-209ENST00000623056 CD226Q15762 336 aa12.64□□□□□ -0.39
LDB3-209ENST00000623056 RNF212Q495C1 297 aa12.64□□□□□ -0.39
LDB3-209ENST00000623056 FAM76BQ5HYJ3 339 aa12.64□□□□□ -0.39
LDB3-209ENST00000623056 C1orf100Q5SVJ3 147 aa12.64□□□□□ -0.39
LDB3-209ENST00000623056 PRSS54Q6PEW0 395 aa12.64□□□□□ -0.39
LDB3-209ENST00000623056 DHRS11Q6UWP2 260 aa12.64□□□□□ -0.39
LDB3-209ENST00000623056 ZNF561Q8N587 486 aa12.64□□□□□ -0.39
LDB3-209ENST00000623056 OR13C3Q8NGS6 347 aa12.64□□□□□ -0.39
LDB3-209ENST00000623056 CCL4L1Q8NHW4 92 aa12.64□□□□□ -0.39
LDB3-209ENST00000623056 ZNF563Q8TA94 476 aa12.64□□□□□ -0.39
LDB3-209ENST00000623056 EDARADDQ8WWZ3 215 aa12.64□□□□□ -0.39
LDB3-209ENST00000623056 RSC1A1Q92681 617 aa12.64□□□□□ -0.39
LDB3-209ENST00000623056 ZNF775Q96BV0 537 aaPredicted RBP12.64□□□□□ -0.39
LDB3-209ENST00000623056 ARL5BQ96KC2 179 aa12.64□□□□□ -0.39
LDB3-209ENST00000623056 TCEAL7Q9BRU2 100 aa12.64□□□□□ -0.39
LDB3-209ENST00000623056 ASH2LQ9UBL3 628 aa12.64□□□□□ -0.39
LDB3-209ENST00000623056 METTL1Q9UBP6 276 aaKnown RBP12.64□□□□□ -0.39
LDB3-209ENST00000623056 CACFD1Q9UGQ2 172 aa12.64□□□□□ -0.39
LDB3-209ENST00000623056 KIF26BQ2KJY2 2108 aa12.64□□□□□ -0.39
LDB3-209ENST00000623056 TRBV23-1A0A0A0MS06 115 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 MEGF11A6BM72 1044 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 METTL21EPA6NDL7 271 aa12.63□□□□□ -0.39
LDB3-209ENST00000623056 MFNGO00587 321 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms