RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 GGTLC2Q14390 218 aa11.96□□□□□ -0.49
PCDHGC3-208ENST00000622836 HIST2H3PS2Q5TEC6 136 aa11.96□□□□□ -0.49
PCDHGC3-208ENST00000622836 MBNL2Q5VZF2 373 aaKnown RBP11.96□□□□□ -0.49
PCDHGC3-208ENST00000622836 ACSM5Q6NUN0 579 aa11.96□□□□□ -0.49
PCDHGC3-208ENST00000622836 LYPD4Q6UWN0 246 aa11.96□□□□□ -0.49
PCDHGC3-208ENST00000622836 HIST2H3AQ71DI3 136 aa11.96□□□□□ -0.49
PCDHGC3-208ENST00000622836 ZNF511Q8NB15 262 aa11.96□□□□□ -0.49
PCDHGC3-208ENST00000622836 OR5L1Q8NGL2 311 aa11.96□□□□□ -0.49
PCDHGC3-208ENST00000622836 UBASH3BQ8TF42 649 aa11.96□□□□□ -0.49
PCDHGC3-208ENST00000622836 ZNRF4Q8WWF5 429 aa11.96□□□□□ -0.49
PCDHGC3-208ENST00000622836 PYDC1Q8WXC3 89 aa11.96□□□□□ -0.49
PCDHGC3-208ENST00000622836 LRTOMTQ8WZ04 291 aa11.96□□□□□ -0.49
PCDHGC3-208ENST00000622836 DUS3LQ96G46 650 aaKnown RBP11.96□□□□□ -0.49
PCDHGC3-208ENST00000622836 ATF6BQ99941 703 aa11.96□□□□□ -0.49
PCDHGC3-208ENST00000622836 OR51V1Q9H2C8 321 aa11.96□□□□□ -0.49
PCDHGC3-208ENST00000622836 SEMA6AQ9H2E6 1030 aa11.96□□□□□ -0.49
PCDHGC3-208ENST00000622836 MED20Q9H944 212 aa11.96□□□□□ -0.49
PCDHGC3-208ENST00000622836 KRT84Q9NSB2 600 aa11.96□□□□□ -0.49
PCDHGC3-208ENST00000622836 DECR2Q9NUI1 292 aa11.96□□□□□ -0.49
PCDHGC3-208ENST00000622836 COMMD3-BMI1R4GMX3 469 aa11.96□□□□□ -0.49
PCDHGC3-208ENST00000622836 ZNF469Q96JG9 3925 aaPredicted RBP11.96□□□□□ -0.5
PCDHGC3-208ENST00000622836 TLN2Q9Y4G6 2542 aa11.95□□□□□ -0.5
PCDHGC3-208ENST00000622836 C17orf100A8MU93 164 aa11.95□□□□□ -0.5
PCDHGC3-208ENST00000622836 F5H5K5 113 aa11.95□□□□□ -0.5
PCDHGC3-208ENST00000622836 H3BSA7 217 aa11.95□□□□□ -0.5
PCDHGC3-208ENST00000622836 HEXAP06865 529 aa11.95□□□□□ -0.5
PCDHGC3-208ENST00000622836 TUBG1P23258 451 aa11.95□□□□□ -0.5
PCDHGC3-208ENST00000622836 ENTPD1P49961 510 aa11.95□□□□□ -0.5
PCDHGC3-208ENST00000622836 DAPP51397 102 aa11.95□□□□□ -0.5
PCDHGC3-208ENST00000622836 ZNF81P51508 661 aa11.95□□□□□ -0.5
PCDHGC3-208ENST00000622836 CRISP1P54107 249 aa11.95□□□□□ -0.5
PCDHGC3-208ENST00000622836 KPNB1Q14974 876 aaKnown RBP11.95□□□□□ -0.5
PCDHGC3-208ENST00000622836 TAF13Q15543 124 aa11.95□□□□□ -0.5
PCDHGC3-208ENST00000622836 PCGF3Q3KNV8 242 aa11.95□□□□□ -0.5
PCDHGC3-208ENST00000622836 KLHL12Q53G59 568 aa11.95□□□□□ -0.5
PCDHGC3-208ENST00000622836 TMEM236Q5W0B7 351 aa11.95□□□□□ -0.5
PCDHGC3-208ENST00000622836 PLBD1Q6P4A8 553 aa11.95□□□□□ -0.5
PCDHGC3-208ENST00000622836 FAHD1Q6P587 224 aa11.95□□□□□ -0.5
PCDHGC3-208ENST00000622836 ZNF540Q8NDQ6 660 aa11.95□□□□□ -0.5
PCDHGC3-208ENST00000622836 NMNAT2Q9BZQ4 307 aa11.95□□□□□ -0.5
PCDHGC3-208ENST00000622836 WDR76Q9H967 626 aa11.95□□□□□ -0.5
PCDHGC3-208ENST00000622836 TUBG2Q9NRH3 451 aa11.95□□□□□ -0.5
PCDHGC3-208ENST00000622836 CYSLTR2Q9NS75 346 aa11.95□□□□□ -0.5
PCDHGC3-208ENST00000622836 PTTG3PQ9NZH4 202 aa11.95□□□□□ -0.5
PCDHGC3-208ENST00000622836 STARD10Q9Y365 291 aa11.95□□□□□ -0.5
PCDHGC3-208ENST00000622836 SETD2Q9BYW2 2564 aaPredicted RBP11.95□□□□□ -0.5
PCDHGC3-208ENST00000622836 ZANQ9Y493 2812 aa11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 LYNX1G3V0Z9 82 aa11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 ZNF593O00488 134 aaPredicted RBP11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 SURF4O15260 269 aa11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 SPRY3O43610 288 aa11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 HPXP02790 462 aa11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 LYNX1P0DP58 116 aa11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 USF1P22415 310 aaPredicted RBP11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 LIPAP38571 399 aa11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 MAGEB1P43366 347 aa11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 SLC6A9P48067 706 aa11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 ACTR3P61158 418 aa11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 RPS7P62081 194 aaKnown RBP11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 CCL8P80075 99 aa11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 CDK5Q00535 292 aa11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 SNAPC1Q16533 368 aa11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 TSTQ16762 297 aaKnown RBP11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 ZMAT1Q5H9K5 638 aa11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 DCXRQ7Z4W1 244 aa11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 ERI1Q8IV48 349 aaKnown RBP11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 C10orf67Q8IYJ2 551 aa11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 ZNF786Q8N393 782 aa11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 PARP8Q8N3A8 854 aa11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 OR6N2Q8NGY6 317 aa11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 SPTSSAQ969W0 71 aa11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 APOBEC3DQ96AK3 386 aaPredicted RBP11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 CMBLQ96DG6 245 aa11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 CENPNQ96H22 339 aaPredicted RBP11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 MAP6Q96JE9 813 aa11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 RAB3IPQ96QF0 476 aaPredicted RBP11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 INTS14Q96SY0 518 aa11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 COPS4Q9BT78 406 aa11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 HCAR1Q9BXC0 346 aa11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 PRRG3Q9BZD7 231 aa11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 SLC25A19Q9HC21 320 aa11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 CENPMQ9NSP4 180 aa11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 TVP23BQ9NYZ1 205 aa11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 CGGBP1Q9UFW8 167 aaPredicted RBP11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 ENOPH1Q9UHY7 261 aa11.94□□□□□ -0.5
PCDHGC3-208ENST00000622836 J3QW42 95 aa11.93□□□□□ -0.5
PCDHGC3-208ENST00000622836 MITFO75030 526 aaPredicted RBP11.93□□□□□ -0.5
PCDHGC3-208ENST00000622836 GLCEO94923 617 aa11.93□□□□□ -0.5
PCDHGC3-208ENST00000622836 LCATP04180 440 aa11.93□□□□□ -0.5
PCDHGC3-208ENST00000622836 GSTT1P30711 240 aa11.93□□□□□ -0.5
PCDHGC3-208ENST00000622836 NR4A2P43354 598 aa11.93□□□□□ -0.5
PCDHGC3-208ENST00000622836 TPTEP56180 551 aa11.93□□□□□ -0.5
PCDHGC3-208ENST00000622836 ESRRGP62508 458 aa11.93□□□□□ -0.5
PCDHGC3-208ENST00000622836 PSG7Q13046 419 aa11.93□□□□□ -0.5
PCDHGC3-208ENST00000622836 CPOQ8IVL8 374 aa11.93□□□□□ -0.5
PCDHGC3-208ENST00000622836 GTF3AQ92664 365 aaKnown RBP11.93□□□□□ -0.5
PCDHGC3-208ENST00000622836 RDH5Q92781 318 aa11.93□□□□□ -0.5
PCDHGC3-208ENST00000622836 PTP4A1Q93096 173 aa11.93□□□□□ -0.5
PCDHGC3-208ENST00000622836 ZMYND19Q96E35 227 aaPredicted RBP11.93□□□□□ -0.5
PCDHGC3-208ENST00000622836 BPESC1Q9GZL8 116 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms