RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 MAGEB4O15481 346 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-229ENST00000622668 PRKYO43930 277 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 ZNF205O95201 554 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 IGKV3-11P04433 115 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 UBCP0CG48 685 aaKnown RBP8.08□□□□□ -1.12
HDAC9-229ENST00000622668 ARSBP15848 533 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 C21orf33P30042 268 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-229ENST00000622668 TMEM81Q6P7N7 255 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 SLC36A1Q7Z2H8 476 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 FOXRED2Q8IWF2 684 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 MSRB3Q8IXL7 192 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 SMAP2Q8WU79 429 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-229ENST00000622668 RDH5Q92781 318 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 UTP4Q969X6 686 aaKnown RBP8.08□□□□□ -1.12
HDAC9-229ENST00000622668 ARHGDIGQ99819 225 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 ZNF416Q9BWM5 594 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 PPP1R3CQ9UQK1 317 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 HSPE1-MOB4S4R3N1 261 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 CENPVL1A0A0U1RR11 272 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 PLPP3O14495 311 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 HS3ST1O14792 307 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 WISP3O95389 354 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-229ENST00000622668 SLC35D3Q5M8T2 416 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 RNF165Q6ZSG1 346 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 SSX6Q7RTT6 188 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 FBXW5Q969U6 566 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 PPP1R14BQ96C90 147 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 SPACA5Q96QH8 159 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 ST6GALNAC5Q9BVH7 336 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 ZNF703Q9H7S9 590 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-229ENST00000622668 ERVK13-1Q9NX77 482 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 B3GNT2Q9NY97 397 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 ZNF639Q9UID6 485 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 FOXD3Q9UJU5 478 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-229ENST00000622668 CCL27Q9Y4X3 112 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 A0A0G2JMM0 328 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 A0A1W2PPB8 328 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 A0A1W2PRD5 423 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 A0A1W2PRF3 423 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 A0A1W2PRM7 423 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 A0A1W2PRS3 328 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 ANKRD61A6NGH8 418 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 TMEM212A6NML5 194 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 KIR3DP1A8MWS1 328 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 SSX4O60224 188 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 NRASP01111 189 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 C4BPBP20851 252 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 CA6P23280 308 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 GPR6P46095 362 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-229ENST00000622668 RBP2P50120 134 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 ZNF81P51508 661 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 PPP1CBP62140 327 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 MICBQ29980 383 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 SLC25A35Q3KQZ1 300 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 CDNFQ49AH0 187 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 ZNF773Q6PK81 442 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 THSD4Q6ZMP0 1018 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 LSRQ86X29 649 aaPredicted RBP8.08□□□□□ -1.12
HDAC9-229ENST00000622668 RAB2BQ8WUD1 216 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 MUL1Q969V5 352 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 PERPQ96FX8 193 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 SLC6A7Q99884 636 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 ADAT1Q9BUB4 502 aaKnown RBP8.08□□□□□ -1.12
HDAC9-229ENST00000622668 SELENOIQ9C0D9 397 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 PIGMQ9H3S5 423 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 PRSS50Q9UI38 385 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 ZNF391Q9UJN7 358 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 PEX16Q9Y5Y5 336 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 CACNA1DQ01668 2161 aa8.08□□□□□ -1.12
HDAC9-229ENST00000622668 AQP7P3A6NL99 342 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 H0YJX3 145 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 AQP7O14520 342 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 TO15178 435 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 NDUFB3O43676 98 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 CLDN14O95500 239 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 PMS2P2O95744 297 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 C7P10643 843 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 RPS2P15880 293 aaKnown RBP8.07□□□□□ -1.12
HDAC9-229ENST00000622668 PRKACAP17612 351 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 HAAOP46952 286 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 MRPL19P49406 292 aaKnown RBP8.07□□□□□ -1.12
HDAC9-229ENST00000622668 ASCL1P50553 236 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 CCL8P80075 99 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 ZNF239Q16600 458 aaKnown RBP8.07□□□□□ -1.12
HDAC9-229ENST00000622668 EXOSC6Q5RKV6 272 aaKnown RBP8.07□□□□□ -1.12
HDAC9-229ENST00000622668 SFRP4Q6FHJ7 346 aaPredicted RBP8.07□□□□□ -1.12
HDAC9-229ENST00000622668 CMTM4Q8IZR5 234 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 OR4K15Q8NH41 348 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 C15orf40Q8WUR7 153 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 NKX3-1Q99801 234 aaPredicted RBP8.07□□□□□ -1.12
HDAC9-229ENST00000622668 ABHD6Q9BV23 337 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 FAM234AQ9H0X4 552 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 SYNPO2LQ9H987 977 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 ZNF281Q9Y2X9 895 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 CSAG2Q9Y5P2 127 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 DEGS1O15121 323 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 BDKRB2P30411 391 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 ZNF121P58317 390 aaPredicted RBP8.07□□□□□ -1.12
HDAC9-229ENST00000622668 C4orf46Q504U0 113 aa8.07□□□□□ -1.12
HDAC9-229ENST00000622668 RPL22L1Q6P5R6 122 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms