RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 EDEM2Q9BV94 578 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 CHIAQ9BZP6 476 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 WDR54Q9H977 334 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 FBLN5Q9UBX5 448 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 C19orf25Q9UFG5 118 aaPredicted RBP8.39□□□□□ -1.07
PDPN-212ENST00000621990 UBQLN2Q9UHD9 624 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 RALGAPA1Q6GYQ0 2036 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 PHF3Q92576 2039 aaKnown RBP8.39□□□□□ -1.07
PDPN-212ENST00000621990 CCDC163A0A0D9SF12 145 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 DCDC2BA2VCK2 349 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 CPED1A4D0V7 1026 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 TUBAL3A6NHL2 446 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 HMSDA8MTL9 139 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 M0R233 179 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 P2RY10O00398 339 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 TRAF3IP2O43734 574 aaPredicted RBP8.39□□□□□ -1.07
PDPN-212ENST00000621990 MPZP25189 248 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 FKBP2P26885 142 aaKnown RBP8.39□□□□□ -1.07
PDPN-212ENST00000621990 ADH6P28332 368 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 SPOCK1Q08629 439 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 PMPCAQ10713 525 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 PHF19Q5T6S3 580 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 PPP1R3BQ86XI6 285 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 OR8H3Q8N146 312 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 MUC20Q8N307 709 aaPredicted RBP8.39□□□□□ -1.07
PDPN-212ENST00000621990 NOXO1Q8NFA2 376 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 OR2AK2Q8NG84 335 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 ELP5Q8TE02 316 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 SPACA9Q96E40 222 aaPredicted RBP8.39□□□□□ -1.07
PDPN-212ENST00000621990 NKX3-1Q99801 234 aaPredicted RBP8.39□□□□□ -1.07
PDPN-212ENST00000621990 NUDT16L1Q9BRJ7 211 aaKnown RBP8.39□□□□□ -1.07
PDPN-212ENST00000621990 IER2Q9BTL4 223 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 METTL7AQ9H8H3 244 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 MOB1AQ9H8S9 216 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 GDF2Q9UK05 429 aaPredicted RBP8.39□□□□□ -1.07
PDPN-212ENST00000621990 WDR87Q6ZQQ6 2873 aa8.39□□□□□ -1.07
PDPN-212ENST00000621990 LOC102723996A0A087X1L8 192 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 H3BUI4 141 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 CFDP00746 253 aaPredicted RBP8.38□□□□□ -1.07
PDPN-212ENST00000621990 DCNP07585 359 aaKnown RBP8.38□□□□□ -1.07
PDPN-212ENST00000621990 ZNF735P0CB33 412 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 FGF5P12034 268 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 NFYAP23511 347 aaPredicted RBP8.38□□□□□ -1.07
PDPN-212ENST00000621990 BDKRB2P30411 391 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 CAMK2BQ13554 666 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 KCNMB1Q16558 191 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 RAB12Q6IQ22 244 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 TMEM81Q6P7N7 255 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 HDDC2Q7Z4H3 204 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.38□□□□□ -1.07
PDPN-212ENST00000621990 UEVLDQ8IX04 471 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 WDSUB1Q8N9V3 476 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 OR10H5Q8NGA6 315 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 OR6X1Q8NH79 312 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 SLC25A43Q8WUT9 341 aaPredicted RBP8.38□□□□□ -1.07
PDPN-212ENST00000621990 RASL10BQ96S79 203 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 EMC6Q9BV81 110 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 PBOV1Q9GZY1 135 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 UPB1Q9UBR1 384 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 PILRBQ9UKJ0 227 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 RAB22AQ9UL26 194 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 MAB21L2Q9Y586 359 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 LHFPL6Q9Y693 200 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 CHCHD2Q9Y6H1 151 aaPredicted RBP8.38□□□□□ -1.07
PDPN-212ENST00000621990 MEIS3P1A6NDR6 274 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 WIPF3A6NGB9 483 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 MCRIP1C9JLW8 97 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 BPNT1O95861 308 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 IGHG1P01857 330 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 EIF1P41567 113 aaKnown RBP8.38□□□□□ -1.07
PDPN-212ENST00000621990 CLDN6P56747 220 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 OPCMLQ14982 345 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 C2orf68Q2NKX9 166 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 MOGAT2Q3SYC2 334 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 FAM69BQ5VUD6 431 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 SLC25A47Q6Q0C1 308 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 CFAP77Q6ZQR2 320 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 PAQR4Q8N4S7 273 aaPredicted RBP8.38□□□□□ -1.07
PDPN-212ENST00000621990 JAGN1Q8N5M9 183 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 OR5M1Q8NGP8 315 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 FGGYQ96C11 551 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 NTNG2Q96CW9 530 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 WDR89Q96FK6 387 aaPredicted RBP8.38□□□□□ -1.07
PDPN-212ENST00000621990 CNTD2Q9H8S5 307 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 TMEM138Q9NPI0 162 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 SLC2A8Q9NY64 477 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 FBXL2Q9UKC9 423 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 SIT1Q9Y3P8 196 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 PI4KAP42356 2102 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 A0A1B0GTI1 187 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 RAB27BO00194 218 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 MEN1O00255 615 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 RAB3DO95716 219 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 PMS2P2O95744 297 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 RLN1P04808 185 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 ENPP1P22413 925 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 GSK3AP49840 483 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 AP2S1P53680 142 aaPredicted RBP8.38□□□□□ -1.07
PDPN-212ENST00000621990 UNC119Q13432 240 aa8.38□□□□□ -1.07
PDPN-212ENST00000621990 ZNF260Q3ZCT1 412 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms