RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 CCDC163A0A0D9SF12 145 aa6.29□□□□□ -1.4
NEDD9-216ENST00000620854 A0A0J9YY10 115 aa6.29□□□□□ -1.4
NEDD9-216ENST00000620854 C17orf51A8MQB3 221 aa6.29□□□□□ -1.4
NEDD9-216ENST00000620854 C17orf105B2RV13 164 aa6.29□□□□□ -1.4
NEDD9-216ENST00000620854 F5H5K5 113 aa6.29□□□□□ -1.4
NEDD9-216ENST00000620854 SGCEO43556 437 aa6.29□□□□□ -1.4
NEDD9-216ENST00000620854 FBXO24O75426 580 aa6.29□□□□□ -1.4
NEDD9-216ENST00000620854 CRYBA1P05813 215 aa6.29□□□□□ -1.4
NEDD9-216ENST00000620854 GP1BAP07359 652 aa6.29□□□□□ -1.4
NEDD9-216ENST00000620854 THBS1P07996 1170 aa6.29□□□□□ -1.4
NEDD9-216ENST00000620854 ST6GAL1P15907 406 aa6.29□□□□□ -1.4
NEDD9-216ENST00000620854 MGMTP16455 207 aa6.29□□□□□ -1.4
NEDD9-216ENST00000620854 PI3P19957 117 aa6.29□□□□□ -1.4
NEDD9-216ENST00000620854 NPBWR1P48145 328 aa6.29□□□□□ -1.4
NEDD9-216ENST00000620854 RAB13P51153 203 aa6.29□□□□□ -1.4
NEDD9-216ENST00000620854 ARF3P61204 181 aaPredicted RBP6.29□□□□□ -1.4
NEDD9-216ENST00000620854 B2MP61769 119 aa6.29□□□□□ -1.4
NEDD9-216ENST00000620854 SNRPEP62304 92 aaKnown RBP6.29□□□□□ -1.4
NEDD9-216ENST00000620854 CSNK2A1P68400 391 aaPredicted RBP6.29□□□□□ -1.4
NEDD9-216ENST00000620854 ARF1P84077 181 aaKnown RBP6.29□□□□□ -1.4
NEDD9-216ENST00000620854 PDZK1IP1Q13113 114 aa6.29□□□□□ -1.4
NEDD9-216ENST00000620854 LY6G6FQ5SQ64 297 aa6.29□□□□□ -1.4
NEDD9-216ENST00000620854 FAM69BQ5VUD6 431 aa6.29□□□□□ -1.4
NEDD9-216ENST00000620854 NKAIN2Q5VXU1 208 aa6.29□□□□□ -1.4
NEDD9-216ENST00000620854 MCATQ8IVS2 390 aaKnown RBP6.29□□□□□ -1.4
NEDD9-216ENST00000620854 GABRG1Q8N1C3 465 aa6.29□□□□□ -1.4
NEDD9-216ENST00000620854 CSNK2A3Q8NEV1 391 aa6.29□□□□□ -1.4
NEDD9-216ENST00000620854 OR5T1Q8NG75 326 aa6.29□□□□□ -1.4
NEDD9-216ENST00000620854 CCDC74AQ96AQ1 378 aa6.29□□□□□ -1.4
NEDD9-216ENST00000620854 CDX2Q99626 313 aaPredicted RBP6.29□□□□□ -1.4
NEDD9-216ENST00000620854 SELENOIQ9C0D9 397 aa6.29□□□□□ -1.4
NEDD9-216ENST00000620854 NXF5Q9H1B4 397 aaKnown RBP6.29□□□□□ -1.4
NEDD9-216ENST00000620854 KCNG2Q9UJ96 466 aa6.29□□□□□ -1.4
NEDD9-216ENST00000620854 C19orf53Q9UNZ5 99 aaPredicted RBP6.29□□□□□ -1.4
NEDD9-216ENST00000620854 ARPC4-TTLL3A0A0A6YYG9 625 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 BORCS7-ASMTA0A0B4J1R7 106 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 OR6C65A6NJZ3 312 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 SULT1B1O43704 296 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 HEXBP07686 556 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 HOXB5P09067 269 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 CSF1P09603 554 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 OR8U9P0C7N5 309 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 ACAA2P42765 397 aaKnown RBP6.28□□□□□ -1.4
NEDD9-216ENST00000620854 DHODHQ02127 395 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 FHL1Q13642 323 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 TGIF1Q15583 401 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 PABPC1L2AQ5JQF8 200 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 EEF1A1P5Q5VTE0 462 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 UNQ9370/PRO34162Q6UXP9 181 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 FAM160A2Q8N612 972 aaPredicted RBP6.28□□□□□ -1.4
NEDD9-216ENST00000620854 OR2G2Q8NGZ5 317 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 ZNF417Q8TAU3 575 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 NUBPLQ8TB37 319 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 SERINC2Q96SA4 455 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 INTS14Q96SY0 518 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 DUSP23Q9BVJ7 150 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 DEFB126Q9BYW3 111 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 STRADBQ9C0K7 418 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 SLC25A32Q9H2D1 315 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 ELOVL3Q9HB03 270 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 PPP4R1LQ9P1A2 415 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 KLF15Q9UIH9 416 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 RPH3AQ9Y2J0 694 aaPredicted RBP6.28□□□□□ -1.4
NEDD9-216ENST00000620854 HIF3AQ9Y2N7 669 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 TMEM218A2RU14 115 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 PLRG1O43660 514 aaKnown RBP6.28□□□□□ -1.4
NEDD9-216ENST00000620854 BRINP1O60477 761 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 CRTAPO75718 401 aaPredicted RBP6.28□□□□□ -1.4
NEDD9-216ENST00000620854 ACTL6AO96019 429 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 IGKV1D-16P01601 117 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 CTSBP07858 339 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 RORAP35398 523 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 CAV2P51636 162 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 PPIAP62937 165 aaKnown RBP6.28□□□□□ -1.4
NEDD9-216ENST00000620854 TLE3Q04726 772 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 HFEQ30201 348 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 PAN3Q58A45 887 aaKnown RBP6.28□□□□□ -1.4
NEDD9-216ENST00000620854 EXOSC6Q5RKV6 272 aaKnown RBP6.28□□□□□ -1.4
NEDD9-216ENST00000620854 JMJD6Q6NYC1 403 aaPredicted RBP6.28□□□□□ -1.4
NEDD9-216ENST00000620854 RBMS3Q6XE24 437 aaKnown RBP6.28□□□□□ -1.4
NEDD9-216ENST00000620854 COX15Q7KZN9 410 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 MARCH3Q86UD3 253 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 SVBPQ8N300 66 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 MFSD9Q8NBP5 474 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 OR5H2Q8NGV7 314 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 SLC2A12Q8TD20 617 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 ROBO4Q8WZ75 1007 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 PHB2Q99623 299 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 NUDT22Q9BRQ3 303 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 UQCC2Q9BRT2 126 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 ZNF442Q9H7R0 627 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 TMED7Q9Y3B3 224 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 LINC00587B1AMM8 73 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 H0YGG7 62 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 GPR75O95800 540 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 RPA2P15927 270 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 GABRG2P18507 467 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 ADH6P28332 368 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 DRD3P35462 400 aa6.28□□□□□ -1.4
NEDD9-216ENST00000620854 PRPS1P60891 318 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms