RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 KISS1RQ969F8 398 aaPredicted RBP9.35□□□□□ -0.91
VPS11-207ENST00000620429 TAAR8Q969N4 342 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 ARSGQ96EG1 525 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 LRRC3BQ96PB8 259 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 SMAD5Q99717 465 aaKnown RBP9.35□□□□□ -0.91
VPS11-207ENST00000620429 MENTQ9BUN1 341 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 PCED1AQ9H1Q7 454 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 CHST11Q9NPF2 352 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 SUSD2Q9UGT4 822 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 SLC13A4Q9UKG4 626 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 FBXO4Q9UKT5 387 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 PLAGL1Q9UM63 463 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 YBX2Q9Y2T7 364 aaKnown RBP9.35□□□□□ -0.91
VPS11-207ENST00000620429 AMDHD2Q9Y303 409 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 V9GY05 133 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 DENND4CQ5VZ89 1909 aa9.35□□□□□ -0.91
VPS11-207ENST00000620429 A0A0G2JN53 185 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 A6NCN8 305 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 UNC119BA6NIH7 251 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 KCNAB3O43448 404 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 TXNDC12O95881 172 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 TRGC2P03986 189 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 CD82P27701 267 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 PYCR1P32322 319 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 GJA4P35212 333 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 BSGP35613 385 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 PBX2P40425 430 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 CDK5R1Q15078 307 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 TCEAL5Q5H9L2 206 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 PIP5KL1Q5T9C9 394 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.34□□□□□ -0.91
VPS11-207ENST00000620429 TMEM183AQ8IXX5 376 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 OR2T33Q8NG76 320 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 WFIKKN1Q96NZ8 548 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 CNN2Q99439 309 aaKnown RBP9.34□□□□□ -0.91
VPS11-207ENST00000620429 RNF126Q9BV68 326 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 PARD6GQ9BYG4 376 aaPredicted RBP9.34□□□□□ -0.91
VPS11-207ENST00000620429 SEPSECSQ9HD40 501 aaKnown RBP9.34□□□□□ -0.91
VPS11-207ENST00000620429 GPR173Q9NS66 373 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 LRFN1Q9P244 771 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 TCFL5Q9UL49 500 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 NDUFS8O00217 210 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 LEFTY1O75610 366 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 TBX6O95947 436 aaPredicted RBP9.34□□□□□ -0.91
VPS11-207ENST00000620429 IL2RAP01589 272 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 HLA-AP01891 365 aaKnown RBP9.34□□□□□ -0.91
VPS11-207ENST00000620429 CD3DP04234 171 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 LYL1P12980 280 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 PTNP21246 168 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 ZBTB25P24278 435 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 METAP1P53582 386 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 Q6ZRG5 221 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 MITD1Q8WV92 249 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 ZNF2Q9BSG1 426 aaPredicted RBP9.34□□□□□ -0.91
VPS11-207ENST00000620429 SEMA5BQ9P283 1151 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 SH3BGRL2Q9UJC5 107 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 ZNF346Q9UL40 294 aaKnown RBP9.34□□□□□ -0.91
VPS11-207ENST00000620429 HS3ST3B1Q9Y662 390 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 CUL9Q8IWT3 2517 aa9.34□□□□□ -0.91
VPS11-207ENST00000620429 REV3LO60673 3130 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 KIR2DL5BA0A0G2JN68 375 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 KIR2DL5BA0A0G2JPC4 375 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 ZC3H12DA2A288 527 aaKnown RBP9.33□□□□□ -0.92
VPS11-207ENST00000620429 TMPRSS11DO60235 418 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 TBX19O60806 448 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 TK1P04183 234 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 KHKP50053 298 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 SCAND1P57086 179 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 TAS2R38P59533 333 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 DLK1P80370 383 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 LASP1Q14847 261 aaKnown RBP9.33□□□□□ -0.92
VPS11-207ENST00000620429 LEMD1Q68G75 181 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 SLC35D2Q76EJ3 337 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 LYG2Q86SG7 212 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 KIR2DL5AQ8N109 375 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 SUN3Q8TAQ9 357 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 FRZBQ92765 325 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 OTUB2Q96DC9 234 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 AQP10Q96PS8 301 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 SYT3Q9BQG1 590 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 NMES1Q9C002 83 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 SLC35B3Q9H1N7 401 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 GLIPR2Q9H4G4 154 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 KCNJ16Q9NPI9 418 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 STEAP1Q9UHE8 339 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 OR52A1Q9UKL2 312 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 ZFP30Q9Y2G7 519 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 SZT2Q5T011 3432 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 PLXNA2O75051 1894 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 SLC22A31A6NKX4 558 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 ZNF705GA8MUZ8 300 aaPredicted RBP9.33□□□□□ -0.92
VPS11-207ENST00000620429 PRICKLE3O43900 615 aaPredicted RBP9.33□□□□□ -0.92
VPS11-207ENST00000620429 ALOX12BO75342 701 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 PAPLNO95428 1278 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 AMBPP02760 352 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 PPBPP02775 128 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 IL6RP08887 468 aaPredicted RBP9.33□□□□□ -0.92
VPS11-207ENST00000620429 CEBPBP17676 345 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 BRS3P32247 399 aa9.33□□□□□ -0.92
VPS11-207ENST00000620429 FRKP42685 505 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms