RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 TMEM53Q6P2H8 277 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 FDX2Q6P4F2 183 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 LRRN1Q6UXK5 716 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 SPATC1Q76KD6 591 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 P2RY8Q86VZ1 359 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 KLBQ86Z14 1044 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 ALDH16A1Q8IZ83 802 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 LINC00528Q8N1L1 170 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 C17orf78Q8N4C9 275 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 YIPF7Q8N8F6 280 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 STEAP2Q8NFT2 490 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 OR1F12Q8NHA8 337 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 AKR7LQ8NHP1 331 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 HAVCR2Q8TDQ0 301 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 NANOS1Q8WY41 292 aaKnown RBP7□□□□□ -1.29
CPNE3-209ENST00000620393 PELI1Q96FA3 418 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 KCNJ15Q99712 375 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 COQ7Q99807 217 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 TTTY10Q9BZA0 68 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 WNT5BQ9H1J7 359 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 OR10A4Q9H209 315 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 NIPAL2Q9H841 368 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 OBP2BQ9NPH6 170 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 DDX28Q9NUL7 540 aaKnown RBP7□□□□□ -1.29
CPNE3-209ENST00000620393 PLEK2Q9NYT0 353 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 GNG8Q9UK08 70 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 SLC5A6Q9Y289 635 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 COL6A6A6NMZ7 2263 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 MED12LQ86YW9 2145 aa7□□□□□ -1.29
CPNE3-209ENST00000620393 ZNF503-AS2A6NEH8 195 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 OR6C6A6NF89 314 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 OR5H1A6NKK0 313 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 ZNF878C9JN71 531 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 RPP14O95059 124 aaKnown RBP6.99□□□□□ -1.29
CPNE3-209ENST00000620393 WNT11O96014 354 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 LALBAP00709 142 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 HSMCR30P0CW71 290 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 COX5BP10606 129 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 CBR1P16152 277 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 AGAP20933 346 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 PSMB9P28065 219 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 UGT2B10P36537 528 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 PSMB10P40306 273 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 TGM4P49221 684 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 ASCL1P50553 236 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 GTF2A1P52655 376 aaPredicted RBP6.99□□□□□ -1.29
CPNE3-209ENST00000620393 GP2P55259 537 aaKnown RBP6.99□□□□□ -1.29
CPNE3-209ENST00000620393 TAS2R43P59537 309 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 GRB2P62993 217 aaKnown RBP6.99□□□□□ -1.29
CPNE3-209ENST00000620393 TUBA1BP68363 451 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 BDH1Q02338 343 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 PLP2Q04941 152 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 MLLT11Q13015 90 aaPredicted RBP6.99□□□□□ -1.29
CPNE3-209ENST00000620393 GPR50Q13585 617 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 GSG1Q2KHT4 349 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 KRTAP27-1Q3LI81 207 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 CCDC58Q4VC31 144 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 TIMM23BQ5SRD1 257 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 LCE2CQ5TA81 110 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 ZNF774Q6NX45 483 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 RPL22L1Q6P5R6 122 aaKnown RBP6.99□□□□□ -1.29
CPNE3-209ENST00000620393 XKRXQ6PP77 449 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 TUBA1AQ71U36 451 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 FAM220AQ7Z4H9 259 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 MDP1Q86V88 176 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 FAM169BQ8N8A8 192 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 CPEB3Q8NE35 698 aaKnown RBP6.99□□□□□ -1.29
CPNE3-209ENST00000620393 HSD17B8Q92506 261 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 TMIGD2Q96BF3 282 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 ZNF75AQ96N20 296 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 ATF6BQ99941 703 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 HDHD2Q9H0R4 259 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 NOX3Q9HBY0 568 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 KCNJ16Q9NPI9 418 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 TRIM36Q9NQ86 728 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 ACOXLQ9NUZ1 547 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 AMDHD2Q9Y303 409 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 LRP12Q9Y561 859 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 SLC25A15Q9Y619 301 aa6.99□□□□□ -1.29
CPNE3-209ENST00000620393 SIRT4Q9Y6E7 314 aaPredicted RBP6.99□□□□□ -1.29
CPNE3-209ENST00000620393 IQCMA0A1B0GVH7 501 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 TMEM269A0A1B0GVZ9 245 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 ACOD1A6NK06 481 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 F5H5K5 113 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 PLPP2O43688 288 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 DOK2O60496 412 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 SRSF10O75494 262 aaKnown RBP6.98□□□□□ -1.29
CPNE3-209ENST00000620393 PNPP00491 289 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 APOC1P02654 83 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 SERPINA5P05154 406 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 CD1AP06126 327 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 CPEP16870 476 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 CD53P19397 219 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 CELP19835 753 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 CRYGSP22914 178 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 HSD11B1P28845 292 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 HOXC12P31275 282 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 OTX1P32242 354 aaPredicted RBP6.98□□□□□ -1.29
CPNE3-209ENST00000620393 TTKP33981 857 aa6.98□□□□□ -1.29
CPNE3-209ENST00000620393 LIPAP38571 399 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms