RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	POTEKP	Q9BYX7	375 aa		13	□□□□□ -0.33
SMTN-223	ENST00000619644	C1orf198	Q9H425	327 aa		13	□□□□□ -0.33
SMTN-223	ENST00000619644	COMMD9	Q9P000	198 aa		13	□□□□□ -0.33
SMTN-223	ENST00000619644	OR6C76	A6NM76	312 aa		13	□□□□□ -0.33
SMTN-223	ENST00000619644	ZNF736	B4DX44	427 aa	Predicted RBP	13	□□□□□ -0.33
SMTN-223	ENST00000619644	KCNAB3	O43448	404 aa		13	□□□□□ -0.33
SMTN-223	ENST00000619644	SGCE	O43556	437 aa		13	□□□□□ -0.33
SMTN-223	ENST00000619644	LMX1B	O60663	402 aa		13	□□□□□ -0.33
SMTN-223	ENST00000619644	ACTL6A	O96019	429 aa		13	□□□□□ -0.33
SMTN-223	ENST00000619644	ITGB2	P05107	769 aa		13	□□□□□ -0.33
SMTN-223	ENST00000619644	CSF2RB	P32927	897 aa		13	□□□□□ -0.33
SMTN-223	ENST00000619644	SLC37A1	P57057	533 aa		13	□□□□□ -0.33
SMTN-223	ENST00000619644	DEFB133	Q30KQ1	61 aa		13	□□□□□ -0.33
SMTN-223	ENST00000619644	TMEM225	Q6GV28	225 aa		13	□□□□□ -0.33
SMTN-223	ENST00000619644		Q6ZS52	159 aa		13	□□□□□ -0.33
SMTN-223	ENST00000619644	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	13	□□□□□ -0.33
SMTN-223	ENST00000619644	ZNF679	Q8IYX0	411 aa		13	□□□□□ -0.33
SMTN-223	ENST00000619644	RXFP4	Q8TDU9	374 aa		13	□□□□□ -0.33
SMTN-223	ENST00000619644	FAM131C	Q96AQ9	280 aa		13	□□□□□ -0.33
SMTN-223	ENST00000619644	CMBL	Q96DG6	245 aa		13	□□□□□ -0.33
SMTN-223	ENST00000619644	OR8B4	Q96RC9	309 aa		13	□□□□□ -0.33
SMTN-223	ENST00000619644	LRRC61	Q9BV99	259 aa		13	□□□□□ -0.33
SMTN-223	ENST00000619644	GAREM1	Q9H706	876 aa		13	□□□□□ -0.33
SMTN-223	ENST00000619644	PDE7B	Q9NP56	450 aa		13	□□□□□ -0.33
SMTN-223	ENST00000619644	TMEM200C	A6NKL6	621 aa		12.99	□□□□□ -0.33
SMTN-223	ENST00000619644	SLC17A2	O00624	439 aa		12.99	□□□□□ -0.33
SMTN-223	ENST00000619644	IL33	O95760	270 aa		12.99	□□□□□ -0.33
SMTN-223	ENST00000619644	HLA-A	P01891	365 aa	Known RBP	12.99	□□□□□ -0.33
SMTN-223	ENST00000619644	OPN1LW	P04000	364 aa		12.99	□□□□□ -0.33
SMTN-223	ENST00000619644	ZNF823	P16415	610 aa		12.99	□□□□□ -0.33
SMTN-223	ENST00000619644	NPBWR1	P48145	328 aa		12.99	□□□□□ -0.33
SMTN-223	ENST00000619644	ACTB	P60709	375 aa		12.99	□□□□□ -0.33
SMTN-223	ENST00000619644	ACTG1	P63261	375 aa		12.99	□□□□□ -0.33
SMTN-223	ENST00000619644	SRSF3	P84103	164 aa	Known RBP	12.99	□□□□□ -0.33
SMTN-223	ENST00000619644	COMMD2	Q86X83	199 aa		12.99	□□□□□ -0.33
SMTN-223	ENST00000619644	OR5M8	Q8NGP6	311 aa		12.99	□□□□□ -0.33
SMTN-223	ENST00000619644	TCTN2	Q96GX1	697 aa		12.99	□□□□□ -0.33
SMTN-223	ENST00000619644	TLNRD1	Q9H1K6	362 aa		12.99	□□□□□ -0.33
SMTN-223	ENST00000619644	ZFP57	Q9NU63	452 aa		12.99	□□□□□ -0.33
SMTN-223	ENST00000619644	UPB1	Q9UBR1	384 aa		12.99	□□□□□ -0.33
SMTN-223	ENST00000619644	TRBV5-7	A0A0A0MS05	114 aa		12.99	□□□□□ -0.33
SMTN-223	ENST00000619644	PRSS37	A4D1T9	235 aa		12.99	□□□□□ -0.33
SMTN-223	ENST00000619644	FABP1	P07148	127 aa		12.99	□□□□□ -0.33
SMTN-223	ENST00000619644	HLA-DOB	P13765	273 aa		12.99	□□□□□ -0.33
SMTN-223	ENST00000619644	ARRB1	P49407	418 aa	Predicted RBP	12.99	□□□□□ -0.33
SMTN-223	ENST00000619644	FMOD	Q06828	376 aa		12.99	□□□□□ -0.33
SMTN-223	ENST00000619644	MOGAT2	Q3SYC2	334 aa		12.99	□□□□□ -0.33
SMTN-223	ENST00000619644	DMRTC1	Q5HYR2	192 aa		12.99	□□□□□ -0.33
SMTN-223	ENST00000619644	KCTD18	Q6PI47	426 aa	Predicted RBP	12.99	□□□□□ -0.33
SMTN-223	ENST00000619644	RHOU	Q7L0Q8	258 aa		12.99	□□□□□ -0.33
SMTN-223	ENST00000619644	SLC16A13	Q7RTY0	426 aa		12.99	□□□□□ -0.33
SMTN-223	ENST00000619644	ABHD6	Q9BV23	337 aa		12.99	□□□□□ -0.33
SMTN-223	ENST00000619644	ALX4	Q9H161	411 aa	Predicted RBP	12.99	□□□□□ -0.33
SMTN-223	ENST00000619644	MRPS18B	Q9Y676	258 aa	Known RBP	12.99	□□□□□ -0.33
SMTN-223	ENST00000619644		F5H0A9	414 aa	Predicted RBP	12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	SULT1C2	O00338	296 aa		12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	FADS1	O60427	444 aa		12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	PPIC	P45877	212 aa		12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	TAS2R19	P59542	299 aa		12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	C3orf33	Q6P1S2	294 aa		12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	CLEC1A	Q8NC01	280 aa		12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	DMBX1	Q8NFW5	382 aa		12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	MCHR2	Q969V1	340 aa		12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	ZNF587	Q96SQ5	575 aa	Predicted RBP	12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	MSRA	Q9UJ68	235 aa		12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	LRP12	Q9Y561	859 aa		12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	HS3ST3A1	Q9Y663	406 aa		12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	MEX3A	A1L020	520 aa	Known RBP	12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	CD34	P28906	385 aa		12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	CXADR	P78310	365 aa		12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	OR52W1	Q6IF63	320 aa		12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	UNQ6126/PRO20091	Q6UXV3	157 aa		12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	ZNF584	Q8IVC4	421 aa		12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	SEH1L	Q96EE3	360 aa		12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	TRAV36DV7	A0A075B6V5	113 aa		12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	IGHV3-20	A0A0C4DH32	117 aa		12.98	□□□□□ -0.33
SMTN-223	ENST00000619644		A0A1B0GTI1	187 aa		12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	C13orf42	A0A1B0GVH6	325 aa		12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	OR2AT4	A6NND4	320 aa		12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	EEF1E1-BLOC1S5	C9J1V9	151 aa		12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	P2RY10	O00398	339 aa		12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	IL11	P20809	199 aa		12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	BLK	P51451	505 aa		12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	RPL27	P61353	136 aa	Known RBP	12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	INSM1	Q01101	510 aa	Predicted RBP	12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	PDZK1IP1	Q13113	114 aa		12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	ACOT7L	Q6ZUV0	252 aa		12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	PGAP1	Q75T13	922 aa		12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	ZNF248	Q8NDW4	579 aa		12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	PAQR8	Q8TEZ7	354 aa		12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	NUDT9	Q9BW91	350 aa		12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	TMEM231	Q9H6L2	316 aa		12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	MRPL22	Q9NWU5	206 aa	Known RBP	12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	CARHSP1	Q9Y2V2	147 aa	Known RBP	12.98	□□□□□ -0.33
SMTN-223	ENST00000619644	TMED7-TICAM2	A0A0A6YYA0	188 aa		12.97	□□□□□ -0.33
SMTN-223	ENST00000619644	SNAPIN	O95295	136 aa		12.97	□□□□□ -0.33
SMTN-223	ENST00000619644	DCN	P07585	359 aa	Known RBP	12.97	□□□□□ -0.33
SMTN-223	ENST00000619644	SLC25A4	P12235	298 aa		12.97	□□□□□ -0.33
SMTN-223	ENST00000619644	AKR1C4	P17516	323 aa		12.97	□□□□□ -0.33
SMTN-223	ENST00000619644	CSRP1	P21291	193 aa	Known RBP	12.97	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms