RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 ANKDD1AQ495B1 522 aa9.44□□□□□ -0.9
TARDBP-221ENST00000619555 MESTQ5EB52 335 aa9.44□□□□□ -0.9
TARDBP-221ENST00000619555 C1orf146Q5VVC0 180 aa9.44□□□□□ -0.9
TARDBP-221ENST00000619555 UNQ6126/PRO20091Q6UXV3 157 aa9.44□□□□□ -0.9
TARDBP-221ENST00000619555 HS3ST5Q8IZT8 346 aa9.44□□□□□ -0.9
TARDBP-221ENST00000619555 TEX29Q8N6K0 151 aa9.44□□□□□ -0.9
TARDBP-221ENST00000619555 FNDC8Q8TC99 324 aa9.44□□□□□ -0.9
TARDBP-221ENST00000619555 FAM216AQ8WUB2 273 aa9.44□□□□□ -0.9
TARDBP-221ENST00000619555 GCDHQ92947 438 aaPredicted RBP9.44□□□□□ -0.9
TARDBP-221ENST00000619555 POP5Q969H6 163 aaKnown RBP9.44□□□□□ -0.9
TARDBP-221ENST00000619555 RASD2Q96D21 266 aa9.44□□□□□ -0.9
TARDBP-221ENST00000619555 C4orf45Q96LM5 186 aa9.44□□□□□ -0.9
TARDBP-221ENST00000619555 Q96M85 177 aa9.44□□□□□ -0.9
TARDBP-221ENST00000619555 DCLRE1CQ96SD1 692 aaKnown RBP9.44□□□□□ -0.9
TARDBP-221ENST00000619555 GPX7Q96SL4 187 aaPredicted RBP9.44□□□□□ -0.9
TARDBP-221ENST00000619555 EGLN1Q9GZT9 426 aa9.44□□□□□ -0.9
TARDBP-221ENST00000619555 REEP1Q9H902 201 aa9.44□□□□□ -0.9
TARDBP-221ENST00000619555 NTN4Q9HB63 628 aa9.44□□□□□ -0.9
TARDBP-221ENST00000619555 POLE4Q9NR33 117 aa9.44□□□□□ -0.9
TARDBP-221ENST00000619555 CYSLTR2Q9NS75 346 aa9.44□□□□□ -0.9
TARDBP-221ENST00000619555 TMCC3Q9ULS5 477 aa9.44□□□□□ -0.9
TARDBP-221ENST00000619555 A6NIZ1 184 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 TIMM8AO60220 97 aaPredicted RBP9.43□□□□□ -0.9
TARDBP-221ENST00000619555 ICMTO60725 284 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 TIPRLO75663 272 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 CCNB2O95067 398 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 NDUFB2O95178 105 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 CD55P08174 381 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 CD14P08571 375 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 SBK2P0C263 348 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 RPL4P36578 427 aaKnown RBP9.43□□□□□ -0.9
TARDBP-221ENST00000619555 LIPAP38571 399 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 GUCA1AP43080 201 aaPredicted RBP9.43□□□□□ -0.9
TARDBP-221ENST00000619555 ARHGDIAP52565 204 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 RAP1BP61224 184 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 RAP1AP62834 184 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 TNFAIP6P98066 277 aaPredicted RBP9.43□□□□□ -0.9
TARDBP-221ENST00000619555 SLC3A1Q07837 685 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 DBPQ10586 325 aaPredicted RBP9.43□□□□□ -0.9
TARDBP-221ENST00000619555 TSPAN31Q12999 210 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 CDK5R2Q13319 367 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 MICAQ29983 383 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 OTPQ5XKR4 325 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 FAM205BPQ63HN1 556 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 SMARCD3Q6STE5 483 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 ZNF620Q6ZNG0 422 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 C1orf174Q8IYL3 243 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 C3orf56Q8N813 242 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 ZDHHC22Q8N966 263 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 AQP11Q8NBQ7 271 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 OR8D4Q8NGM9 314 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 NANPQ8TBE9 248 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 FANK1Q8TC84 345 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 GNPDA2Q8TDQ7 276 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 C22orf15Q8WYQ4 148 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 NIPSNAP1Q9BPW8 284 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 RBM4Q9BWF3 364 aaKnown RBP9.43□□□□□ -0.9
TARDBP-221ENST00000619555 SUCNR1Q9BXA5 334 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 OR52D1Q9H346 318 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 EGLN3Q9H6Z9 239 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 ELOVL3Q9HB03 270 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 KRCC1Q9NPI7 259 aaPredicted RBP9.43□□□□□ -0.9
TARDBP-221ENST00000619555 ESM1Q9NQ30 184 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 NRIP3Q9NQ35 241 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 ZDHHC8Q9ULC8 765 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 NPTNQ9Y639 398 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 DOCK11Q5JSL3 2073 aa9.43□□□□□ -0.9
TARDBP-221ENST00000619555 TRRAPQ9Y4A5 3859 aa9.42□□□□□ -0.9
TARDBP-221ENST00000619555 TEX13CA0A0J9YWL9 993 aa9.42□□□□□ -0.9
TARDBP-221ENST00000619555 C12orf71A8MTZ7 269 aa9.42□□□□□ -0.9
TARDBP-221ENST00000619555 H3BSA7 217 aa9.42□□□□□ -0.9
TARDBP-221ENST00000619555 PPP1R3DO95685 299 aa9.42□□□□□ -0.9
TARDBP-221ENST00000619555 ABHD16AO95870 558 aa9.42□□□□□ -0.9
TARDBP-221ENST00000619555 FSHBP01225 129 aa9.42□□□□□ -0.9
TARDBP-221ENST00000619555 IGHV2-70P01814 119 aa9.42□□□□□ -0.9
TARDBP-221ENST00000619555 RFX4Q33E94 735 aa9.42□□□□□ -0.9
TARDBP-221ENST00000619555 Q6ZR03 302 aa9.42□□□□□ -0.9
TARDBP-221ENST00000619555 PTCHD4Q6ZW05 846 aa9.42□□□□□ -0.9
TARDBP-221ENST00000619555 SYT9Q86SS6 491 aa9.42□□□□□ -0.9
TARDBP-221ENST00000619555 BPIFB2Q8N4F0 458 aa9.42□□□□□ -0.9
TARDBP-221ENST00000619555 OR10G2Q8NGC3 310 aa9.42□□□□□ -0.9
TARDBP-221ENST00000619555 ST7LQ8TDW4 575 aa9.42□□□□□ -0.9
TARDBP-221ENST00000619555 CMBLQ96DG6 245 aa9.42□□□□□ -0.9
TARDBP-221ENST00000619555 DUS3LQ96G46 650 aaKnown RBP9.42□□□□□ -0.9
TARDBP-221ENST00000619555 SAMD8Q96LT4 415 aa9.42□□□□□ -0.9
TARDBP-221ENST00000619555 JMJD8Q96S16 334 aa9.42□□□□□ -0.9
TARDBP-221ENST00000619555 DIRC2Q96SL1 478 aa9.42□□□□□ -0.9
TARDBP-221ENST00000619555 MMP26Q9NRE1 261 aa9.42□□□□□ -0.9
TARDBP-221ENST00000619555 TMEM106BQ9NUM4 274 aa9.42□□□□□ -0.9
TARDBP-221ENST00000619555 GRHPRQ9UBQ7 328 aa9.42□□□□□ -0.9
TARDBP-221ENST00000619555 CGGBP1Q9UFW8 167 aaPredicted RBP9.42□□□□□ -0.9
TARDBP-221ENST00000619555 PURGQ9UJV8 347 aaKnown RBP9.42□□□□□ -0.9
TARDBP-221ENST00000619555 NDRG4Q9ULP0 352 aaKnown RBP9.42□□□□□ -0.9
TARDBP-221ENST00000619555 STARD10Q9Y365 291 aa9.42□□□□□ -0.9
TARDBP-221ENST00000619555 IER3IP1Q9Y5U9 82 aa9.42□□□□□ -0.9
TARDBP-221ENST00000619555 PKD1L1Q8TDX9 2849 aa9.41□□□□□ -0.9
TARDBP-221ENST00000619555 SOCS2O14508 198 aa9.41□□□□□ -0.9
TARDBP-221ENST00000619555 DOK2O60496 412 aa9.41□□□□□ -0.9
TARDBP-221ENST00000619555 COX5BP10606 129 aa9.41□□□□□ -0.9
TARDBP-221ENST00000619555 CTLA4P16410 223 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms