RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 LCN6P62502 163 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 PRAMEF9Q5VWM5 478 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 GRINAQ7Z429 371 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 DND1Q8IYX4 353 aaKnown RBP2.79□□□□□ -1.96
LPP-221ENST00000618621 PLEKHA2Q9HB19 425 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 CRLF2Q9HC73 371 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 MED9Q9NWA0 146 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 POMT2Q9UKY4 750 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 SRPK3Q9UPE1 567 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 RFPL4AA6NLU0 287 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 RFPL4AL1F8VTS6 287 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 RNASEK-C17orf49H0YIS7 233 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 UBE2L6O14933 153 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 PLPP2O43688 288 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 OR8G3PP0DMU2 310 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 ZNF85Q03923 595 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 DUSP5Q16690 384 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 AGBL4Q5VU57 503 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 LYSMD4Q5XG99 296 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 MARCH3Q86UD3 253 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 DVL3Q92997 716 aaPredicted RBP2.79□□□□□ -1.96
LPP-221ENST00000618621 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.79□□□□□ -1.96
LPP-221ENST00000618621 THAP10Q9P2Z0 257 aaPredicted RBP2.79□□□□□ -1.96
LPP-221ENST00000618621 PRELID3BQ9Y3B1 194 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 CNR1P21554 472 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 FGF9P31371 208 aaPredicted RBP2.79□□□□□ -1.96
LPP-221ENST00000618621 HCCSP53701 268 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 ARG2P78540 354 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 PLA1AQ53H76 456 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 C1orf140Q5VVS0 124 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 OR5M10Q6IEU7 315 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 H3F3CQ6NXT2 135 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 CLEC1AQ8NC01 280 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 BORCS7Q96B45 105 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 TMEM59Q9BXS4 323 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 NDRG3Q9UGV2 375 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 SETD2Q9BYW2 2564 aaPredicted RBP2.79□□□□□ -1.96
LPP-221ENST00000618621 LTBP4Q8N2S1 1624 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 KCNE1BA0A087WTH5 132 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 ZNF705FA8MVS1 300 aaPredicted RBP2.79□□□□□ -1.96
LPP-221ENST00000618621 MCRIP1C9JLW8 97 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 H0YIG0 161 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 TNFRSF10CO14798 259 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 RRP8O43159 456 aaKnown RBP2.79□□□□□ -1.96
LPP-221ENST00000618621 GSTZ1O43708 216 aaPredicted RBP2.79□□□□□ -1.96
LPP-221ENST00000618621 OR2C1O95371 312 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 ZNF705DP0CH99 300 aaPredicted RBP2.79□□□□□ -1.96
LPP-221ENST00000618621 ZNF705BP0CI00 300 aaPredicted RBP2.79□□□□□ -1.96
LPP-221ENST00000618621 SPP1P10451 314 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 NME2P22392 152 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 APLNRP35414 380 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 CPEB4Q17RY0 729 aaKnown RBP eCLIP2.79□□□□□ -1.96
LPP-221ENST00000618621 OGFOD3Q6PK18 319 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 ANGPTL5Q86XS5 388 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 TMEM229BQ8NBD8 167 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 MORN4Q8NDC4 146 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 HHIPL1Q96JK4 782 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 UBL7Q96S82 380 aaPredicted RBP2.79□□□□□ -1.96
LPP-221ENST00000618621 PKMYT1Q99640 499 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 OR2J1Q9GZK6 312 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 CCL26Q9Y258 94 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 PRSS37A4D1T9 235 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 IDH3GP51553 393 aaPredicted RBP2.79□□□□□ -1.96
LPP-221ENST00000618621 ARHGAP11BQ3KRB8 267 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 C12orf73Q69YU5 71 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 MRPL21Q7Z2W9 205 aaKnown RBP2.79□□□□□ -1.96
LPP-221ENST00000618621 RABEPKQ7Z6M1 372 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 OR51D1Q8NGF3 324 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 IFI44Q8TCB0 444 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 SPAG8Q99932 426 aaPredicted RBP2.79□□□□□ -1.96
LPP-221ENST00000618621 MARVELD1Q9BSK0 173 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 CABLES2Q9BTV7 478 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 MS4A8Q9BY19 250 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 CDH20Q9HBT6 801 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 SLCO1C1Q9NYB5 712 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 RALYQ9UKM9 306 aaKnown RBP2.79□□□□□ -1.96
LPP-221ENST00000618621 WIF1Q9Y5W5 379 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 SH2D1BO14796 132 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 FFAR1O14842 300 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 ACTL6BO94805 426 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 DUTP33316 252 aaKnown RBP2.79□□□□□ -1.96
LPP-221ENST00000618621 P2RX1P51575 399 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 SSPNQ14714 243 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 TFAP2EQ6VUC0 442 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 ZNF620Q6ZNG0 422 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 CMTM4Q8IZR5 234 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 ZFP82Q8N141 532 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 OR4D10Q8NGI6 311 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 RIMS4Q9H426 269 aaPredicted RBP2.79□□□□□ -1.96
LPP-221ENST00000618621 FER1L4A9Z1Z3 1794 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 C4orf47A7E2U8 309 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 E5RGE8 158 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 TRAPPC2LH3BP13 241 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 OR13C7P0DN81 318 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 SNU13P55769 128 aaKnown RBP2.79□□□□□ -1.96
LPP-221ENST00000618621 PCBP4P57723 403 aaKnown RBP2.79□□□□□ -1.96
LPP-221ENST00000618621 HSF1Q00613 529 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 KIAA0040Q15053 153 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 TMEM41BQ5BJD5 291 aa2.79□□□□□ -1.96
LPP-221ENST00000618621 CLLU1Q5K131 121 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms