RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 PRRX1P54821 245 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 EPS8Q12929 822 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 SLC17A1Q14916 467 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 SEC23BQ15437 767 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 SYPL1Q16563 259 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 BAK1Q16611 211 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 NDUFAF6Q330K2 333 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 FGD3Q5JSP0 725 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 WBP2NLQ6ICG8 309 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 KLHL17Q6TDP4 642 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 METAP1DQ6UB28 335 aaPredicted RBP7.46□□□□□ -1.22
GPC6-202ENST00000617456 TMEM108Q6UXF1 575 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 GDPD3Q7L5L3 318 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 ABHD12BQ7Z5M8 362 aaPredicted RBP7.46□□□□□ -1.22
GPC6-202ENST00000617456 AMIGO2Q86SJ2 522 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 OR8H3Q8N146 312 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 MIER2Q8N344 545 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 SVOPLQ8N434 492 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 BHLHE22Q8NFJ8 381 aaPredicted RBP7.46□□□□□ -1.22
GPC6-202ENST00000617456 NANPQ8TBE9 248 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 ST8SIA2Q92186 375 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 CNOT9Q92600 299 aaKnown RBP7.46□□□□□ -1.22
GPC6-202ENST00000617456 RPL3LQ92901 407 aaKnown RBP7.46□□□□□ -1.22
GPC6-202ENST00000617456 PIMREGQ9BSJ6 248 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 HDHD2Q9H0R4 259 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 GAL3ST2Q9H3Q3 398 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 WDR55Q9H6Y2 383 aaPredicted RBP7.46□□□□□ -1.22
GPC6-202ENST00000617456 KAT8Q9H7Z6 458 aaKnown RBP7.46□□□□□ -1.22
GPC6-202ENST00000617456 CACYBPQ9HB71 228 aaKnown RBP7.46□□□□□ -1.22
GPC6-202ENST00000617456 CHMP1AQ9HD42 196 aaPredicted RBP7.46□□□□□ -1.22
GPC6-202ENST00000617456 OBP2BQ9NPH6 170 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 ARL8BQ9NVJ2 186 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 IMPAD1Q9NX62 359 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 MIOXQ9UGB7 285 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 KLHL21Q9UJP4 597 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 PURGQ9UJV8 347 aaKnown RBP7.46□□□□□ -1.22
GPC6-202ENST00000617456 OSGIN1Q9UJX0 560 aa7.46□□□□□ -1.22
GPC6-202ENST00000617456 HEATR1Q9H583 2144 aaKnown RBP7.46□□□□□ -1.22
GPC6-202ENST00000617456 TMED7-TICAM2A0A0A6YYA0 188 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 IGHV4-61A0A0C4DH41 118 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 A8MVM7 634 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 H7C2Y5 167 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 H7C417 338 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 TCF21O43680 179 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 FMO6PO60774 539 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 UPK1BO75841 260 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 CHRM4P08173 479 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 GSTP1P09211 210 aaKnown RBP7.45□□□□□ -1.22
GPC6-202ENST00000617456 TFPIP10646 304 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 BMP4P12644 408 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 CD36P16671 472 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 CD247P20963 164 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 CXCR1P25024 350 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 CFPP27918 469 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 PEX2P28328 305 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 RYKP34925 604 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 SRP14P37108 136 aaKnown RBP7.45□□□□□ -1.22
GPC6-202ENST00000617456 AKR1D1P51857 326 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 POLR2JP52435 117 aaKnown RBP7.45□□□□□ -1.22
GPC6-202ENST00000617456 CD81P60033 236 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 PLAURQ03405 335 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 CHRNB3Q05901 458 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 CR1LQ2VPA4 569 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 C3orf36Q3SXR2 165 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 LRIF1Q5T3J3 769 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 MRPL2Q5T653 305 aaKnown RBP7.45□□□□□ -1.22
GPC6-202ENST00000617456 RPL13AP3Q6NVV1 102 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 EPGNQ6UW88 154 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 PQLC1Q8N2U9 271 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 NANOGP1Q8N7R0 232 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.45□□□□□ -1.22
GPC6-202ENST00000617456 POMGNT2Q8NAT1 580 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 SETD9Q8NE22 299 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 OR4M1Q8NGD0 313 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 OR52P1PQ8NH57 321 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 RHOXF1Q8NHV9 184 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 STK35Q8TDR2 534 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 SLC38A5Q8WUX1 472 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 SFT2D1Q8WV19 159 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 NSMAFQ92636 917 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 FOXN4Q96NZ1 517 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 INPP5KQ9BT40 448 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 SOX7Q9BT81 388 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 SPATA9Q9BWV2 254 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 A4GALTQ9NPC4 353 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 PAK1IP1Q9NWT1 392 aaPredicted RBP7.45□□□□□ -1.22
GPC6-202ENST00000617456 USP22Q9UPT9 525 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 CORO2BQ9UQ03 480 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 AMDHD2Q9Y303 409 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 TMED7Q9Y3B3 224 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 A3GALT2U3KPV4 340 aa7.45□□□□□ -1.22
GPC6-202ENST00000617456 TENM1Q9UKZ4 2725 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 LOC102725191A0A1B0GVB3 256 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 LIPT2A6NK58 231 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 AQP7P3A6NL99 342 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 VWC2LB2RUY7 222 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 M0R3H8 397 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 SULT1C2O00338 296 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 KCNAB3O43448 404 aa7.44□□□□□ -1.22
GPC6-202ENST00000617456 OR2T1O43869 369 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms