RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 BCKDHBP21953 392 aa16.78■□□□□ 0.28
AC008878.3-201ENST00000617428 MRPS34P82930 218 aaKnown RBP16.78■□□□□ 0.28
AC008878.3-201ENST00000617428 DMRTC1Q5HYR2 192 aa16.78■□□□□ 0.28
AC008878.3-201ENST00000617428 SPRED2Q7Z698 418 aa16.78■□□□□ 0.28
AC008878.3-201ENST00000617428 RBMXL3Q8N7X1 1067 aaKnown RBP16.78■□□□□ 0.28
AC008878.3-201ENST00000617428 GABARAPL3Q9BY60 117 aa16.78■□□□□ 0.28
AC008878.3-201ENST00000617428 C11orf54Q9H0W9 315 aaPredicted RBP16.78■□□□□ 0.28
AC008878.3-201ENST00000617428 EDARQ9UNE0 448 aa16.78■□□□□ 0.28
AC008878.3-201ENST00000617428 M0R296 226 aa16.77■□□□□ 0.28
AC008878.3-201ENST00000617428 SIRPB1O00241 398 aa16.77■□□□□ 0.28
AC008878.3-201ENST00000617428 NXPH3O95157 252 aa16.77■□□□□ 0.28
AC008878.3-201ENST00000617428 PCSK6P29122 969 aa16.77■□□□□ 0.28
AC008878.3-201ENST00000617428 ZNF628Q5EBL2 1059 aa16.77■□□□□ 0.28
AC008878.3-201ENST00000617428 BRICD5Q6PL45 260 aa16.77■□□□□ 0.28
AC008878.3-201ENST00000617428 OVCH1Q7RTY7 1134 aa16.77■□□□□ 0.28
AC008878.3-201ENST00000617428 SLA2Q9H6Q3 261 aa16.77■□□□□ 0.28
AC008878.3-201ENST00000617428 ZNF225Q9UK10 706 aa16.77■□□□□ 0.28
AC008878.3-201ENST00000617428 ANKUB1A6NFN9 424 aa16.77■□□□□ 0.28
AC008878.3-201ENST00000617428 TAF9Q16594 264 aa16.77■□□□□ 0.28
AC008878.3-201ENST00000617428 ACER2Q5QJU3 275 aa16.77■□□□□ 0.28
AC008878.3-201ENST00000617428 TCTEX1D2Q8WW35 142 aa16.77■□□□□ 0.28
AC008878.3-201ENST00000617428 SHARPINQ9H0F6 387 aa16.77■□□□□ 0.28
AC008878.3-201ENST00000617428 TAS2R5Q9NYW4 299 aa16.77■□□□□ 0.28
AC008878.3-201ENST00000617428 POM121CA8CG34 1229 aa16.77■□□□□ 0.27
AC008878.3-201ENST00000617428 MED6O75586 246 aa16.77■□□□□ 0.27
AC008878.3-201ENST00000617428 HOXB3P14651 431 aaPredicted RBP16.77■□□□□ 0.27
AC008878.3-201ENST00000617428 CCR9P51686 369 aa16.77■□□□□ 0.27
AC008878.3-201ENST00000617428 DPPA2Q7Z7J5 298 aa16.77■□□□□ 0.27
AC008878.3-201ENST00000617428 TMEM179BQ7Z7N9 219 aa16.77■□□□□ 0.27
AC008878.3-201ENST00000617428 SUMF2Q8NBJ7 301 aa16.77■□□□□ 0.27
AC008878.3-201ENST00000617428 AKR7LQ8NHP1 331 aa16.77■□□□□ 0.27
AC008878.3-201ENST00000617428 DAZAP1Q96EP5 407 aaKnown RBP16.77■□□□□ 0.27
AC008878.3-201ENST00000617428 SLC25A21Q9BQT8 299 aaPredicted RBP16.77■□□□□ 0.27
AC008878.3-201ENST00000617428 SUCNR1Q9BXA5 334 aa16.77■□□□□ 0.27
AC008878.3-201ENST00000617428 PTTG3PQ9NZH4 202 aa16.77■□□□□ 0.27
AC008878.3-201ENST00000617428 CSF3P09919 207 aa16.77■□□□□ 0.27
AC008878.3-201ENST00000617428 HTD2P86397 168 aa16.77■□□□□ 0.27
AC008878.3-201ENST00000617428 OR13C5Q8NGS8 318 aa16.77■□□□□ 0.27
AC008878.3-201ENST00000617428 HPSE2Q8WWQ2 592 aa16.77■□□□□ 0.27
AC008878.3-201ENST00000617428 MTCH2Q9Y6C9 303 aa16.77■□□□□ 0.27
AC008878.3-201ENST00000617428 SULT1B1O43704 296 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 FADS1O60427 444 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 ZNF766Q5HY98 468 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 HES3Q5TGS1 186 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 LSRQ86X29 649 aaPredicted RBP16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 SYS1Q8N2H4 156 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 OR51S1Q8NGJ8 323 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 ZNF318Q5VUA4 2279 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 DOCK2Q92608 1830 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 TCRBV5S2A0A599 114 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 XRCC2O43543 280 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 EPHA2P29317 976 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 TFAP2EQ6VUC0 442 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 MDGA2Q7Z553 956 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 LGI3Q8N145 548 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 DTWD2Q8NBA8 298 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 SEH1LQ96EE3 360 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 KTI12Q96EK9 354 aaPredicted RBP16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 CLEC1BQ9P126 229 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 SCN1AP35498 2009 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 FAM221AA4D161 298 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 SH2D1BO14796 132 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 WDR1O75083 606 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 BAXQ07812 192 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 ZNF573Q86YE8 665 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 C1orf87Q8N0U7 546 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 REEP6Q96HR9 211 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 FCRL1Q96LA6 429 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 FAM60AQ9NP50 221 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 SLC6A13Q9NSD5 602 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 GDF2Q9UK05 429 aaPredicted RBP16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 COPS3Q9UNS2 423 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 B9D1Q9UPM9 204 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 SHROOM3Q8TF72 1996 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 TMEM235A6NFC5 223 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 NKX2-2O95096 273 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 CD160O95971 181 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 JUNBP17275 347 aaPredicted RBP16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 SERPINF1P36955 418 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 RAB11AP62491 216 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 EBPQ15125 230 aaKnown RBP16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 KHDC1LQ5JSQ8 128 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 C16orf47Q6ZP98 133 aaPredicted RBP16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 CEP250Q9BV73 2442 aa16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 NUP214P35658 2090 aaPredicted RBP16.76■□□□□ 0.27
AC008878.3-201ENST00000617428 OPRM1P35372 400 aa16.75■□□□□ 0.27
AC008878.3-201ENST00000617428 SLC17A1Q14916 467 aa16.75■□□□□ 0.27
AC008878.3-201ENST00000617428 FXNQ16595 210 aa16.75■□□□□ 0.27
AC008878.3-201ENST00000617428 LACC1Q8IV20 430 aa16.75■□□□□ 0.27
AC008878.3-201ENST00000617428 DND1Q8IYX4 353 aaKnown RBP16.75■□□□□ 0.27
AC008878.3-201ENST00000617428 OR2L13Q8N349 312 aa16.75■□□□□ 0.27
AC008878.3-201ENST00000617428 CDCA4Q9BXL8 241 aa16.75■□□□□ 0.27
AC008878.3-201ENST00000617428 S100A7P31151 101 aa16.75■□□□□ 0.27
AC008878.3-201ENST00000617428 PEA15Q15121 130 aa16.75■□□□□ 0.27
AC008878.3-201ENST00000617428 HES7Q9BYE0 225 aa16.75■□□□□ 0.27
AC008878.3-201ENST00000617428 PBOV1Q9GZY1 135 aa16.75■□□□□ 0.27
AC008878.3-201ENST00000617428 GABARAPL1Q9H0R8 117 aa16.75■□□□□ 0.27
AC008878.3-201ENST00000617428 ERVMER34-1Q9H9K5 563 aa16.75■□□□□ 0.27
AC008878.3-201ENST00000617428 C5orf67F2Z3F1 127 aa16.75■□□□□ 0.27
AC008878.3-201ENST00000617428 APOA2P02652 100 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms