RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 RTTNQ86VV8 2226 aa13.51□□□□□ -0.25
PCDHGC3-204ENST00000617222 DAPL1A0PJW8 107 aa13.51□□□□□ -0.25
PCDHGC3-204ENST00000617222 IRGMA1A4Y4 181 aa13.51□□□□□ -0.25
PCDHGC3-204ENST00000617222 SLC1A7O00341 560 aa13.51□□□□□ -0.25
PCDHGC3-204ENST00000617222 PHYHO14832 338 aa13.51□□□□□ -0.25
PCDHGC3-204ENST00000617222 MAGEB4O15481 346 aaPredicted RBP13.51□□□□□ -0.25
PCDHGC3-204ENST00000617222 H2BFMP0C1H6 154 aa13.51□□□□□ -0.25
PCDHGC3-204ENST00000617222 OPRL1P41146 370 aa13.51□□□□□ -0.25
PCDHGC3-204ENST00000617222 PRKXP51817 358 aa13.51□□□□□ -0.25
PCDHGC3-204ENST00000617222 ACTC1P68032 377 aa13.51□□□□□ -0.25
PCDHGC3-204ENST00000617222 ACTA1P68133 377 aa13.51□□□□□ -0.25
PCDHGC3-204ENST00000617222 ZNF85Q03923 595 aa13.51□□□□□ -0.25
PCDHGC3-204ENST00000617222 MED21Q13503 144 aa13.51□□□□□ -0.25
PCDHGC3-204ENST00000617222 KRTAP27-1Q3LI81 207 aa13.51□□□□□ -0.25
PCDHGC3-204ENST00000617222 KCTD18Q6PI47 426 aaPredicted RBP13.51□□□□□ -0.25
PCDHGC3-204ENST00000617222 LRRN1Q6UXK5 716 aa13.51□□□□□ -0.25
PCDHGC3-204ENST00000617222 SSX6Q7RTT6 188 aa13.51□□□□□ -0.25
PCDHGC3-204ENST00000617222 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.51□□□□□ -0.25
PCDHGC3-204ENST00000617222 ZNF786Q8N393 782 aa13.51□□□□□ -0.25
PCDHGC3-204ENST00000617222 ACBD7Q8N6N7 88 aa13.51□□□□□ -0.25
PCDHGC3-204ENST00000617222 ZNF540Q8NDQ6 660 aa13.51□□□□□ -0.25
PCDHGC3-204ENST00000617222 KBTBD8Q8NFY9 601 aa13.51□□□□□ -0.25
PCDHGC3-204ENST00000617222 SPTSSAQ969W0 71 aa13.51□□□□□ -0.25
PCDHGC3-204ENST00000617222 KCNJ15Q99712 375 aa13.51□□□□□ -0.25
PCDHGC3-204ENST00000617222 ELOVL3Q9HB03 270 aa13.51□□□□□ -0.25
PCDHGC3-204ENST00000617222 SCN3BQ9NY72 215 aa13.51□□□□□ -0.25
PCDHGC3-204ENST00000617222 EIF3KQ9UBQ5 218 aaKnown RBP13.51□□□□□ -0.25
PCDHGC3-204ENST00000617222 ATPIF1Q9UII2 106 aa13.51□□□□□ -0.25
PCDHGC3-204ENST00000617222 IKZF2Q9UKS7 526 aa13.51□□□□□ -0.25
PCDHGC3-204ENST00000617222 ATP23Q9Y6H3 246 aa13.51□□□□□ -0.25
PCDHGC3-204ENST00000617222 CADP27708 2225 aa13.5□□□□□ -0.25
PCDHGC3-204ENST00000617222 FAM221AA4D161 298 aa13.5□□□□□ -0.25
PCDHGC3-204ENST00000617222 EFCAB10A6NFE3 127 aa13.5□□□□□ -0.25
PCDHGC3-204ENST00000617222 SHISA9B4DS77 424 aa13.5□□□□□ -0.25
PCDHGC3-204ENST00000617222 PTGES3LE9PB15 166 aa13.5□□□□□ -0.25
PCDHGC3-204ENST00000617222 GOSR1O95249 250 aa13.5□□□□□ -0.25
PCDHGC3-204ENST00000617222 ADRA2AP08913 450 aa13.5□□□□□ -0.25
PCDHGC3-204ENST00000617222 FAM157BP0CG42 384 aa13.5□□□□□ -0.25
PCDHGC3-204ENST00000617222 HSD11B1P28845 292 aa13.5□□□□□ -0.25
PCDHGC3-204ENST00000617222 WNT5AP41221 380 aa13.5□□□□□ -0.25
PCDHGC3-204ENST00000617222 TPTEP56180 551 aa13.5□□□□□ -0.25
PCDHGC3-204ENST00000617222 GRB2P62993 217 aaKnown RBP13.5□□□□□ -0.25
PCDHGC3-204ENST00000617222 HGFACQ04756 655 aa13.5□□□□□ -0.25
PCDHGC3-204ENST00000617222 ST3GAL4Q11206 333 aa13.5□□□□□ -0.25
PCDHGC3-204ENST00000617222 ZNF787Q6DD87 383 aa13.5□□□□□ -0.25
PCDHGC3-204ENST00000617222 AHSA2Q719I0 299 aa13.5□□□□□ -0.25
PCDHGC3-204ENST00000617222 RHOUQ7L0Q8 258 aa13.5□□□□□ -0.25
PCDHGC3-204ENST00000617222 LHFPL3Q86UP9 236 aa13.5□□□□□ -0.25
PCDHGC3-204ENST00000617222 NAA40Q86UY6 237 aa13.5□□□□□ -0.25
PCDHGC3-204ENST00000617222 NEUROG1Q92886 237 aa13.5□□□□□ -0.25
PCDHGC3-204ENST00000617222 MARVELD3Q96A59 401 aa13.5□□□□□ -0.25
PCDHGC3-204ENST00000617222 TMEM80Q96HE8 168 aa13.5□□□□□ -0.25
PCDHGC3-204ENST00000617222 C4orf45Q96LM5 186 aa13.5□□□□□ -0.25
PCDHGC3-204ENST00000617222 OR8B4Q96RC9 309 aa13.5□□□□□ -0.25
PCDHGC3-204ENST00000617222 TMEM204Q9BSN7 226 aa13.5□□□□□ -0.25
PCDHGC3-204ENST00000617222 MROQ9BYG7 248 aa13.5□□□□□ -0.25
PCDHGC3-204ENST00000617222 OR51B6Q9H340 312 aa13.5□□□□□ -0.25
PCDHGC3-204ENST00000617222 CNOT2Q9NZN8 540 aaKnown RBP13.5□□□□□ -0.25
PCDHGC3-204ENST00000617222 POU2F3Q9UKI9 436 aa13.5□□□□□ -0.25
PCDHGC3-204ENST00000617222 ADGRG4Q8IZF6 3080 aa13.5□□□□□ -0.25
PCDHGC3-204ENST00000617222 COL12A1Q99715 3063 aa13.5□□□□□ -0.25
PCDHGC3-204ENST00000617222 M0R135 149 aa13.49□□□□□ -0.25
PCDHGC3-204ENST00000617222 CTAG2O75638 210 aa13.49□□□□□ -0.25
PCDHGC3-204ENST00000617222 ABHD16AO95870 558 aa13.49□□□□□ -0.25
PCDHGC3-204ENST00000617222 IGHA1P01876 353 aa13.49□□□□□ -0.25
PCDHGC3-204ENST00000617222 ACSM4P0C7M7 580 aa13.49□□□□□ -0.25
PCDHGC3-204ENST00000617222 PIPP12273 146 aaPredicted RBP13.49□□□□□ -0.25
PCDHGC3-204ENST00000617222 NR4A1P22736 598 aa13.49□□□□□ -0.25
PCDHGC3-204ENST00000617222 DCKP27707 260 aa13.49□□□□□ -0.25
PCDHGC3-204ENST00000617222 UCP2P55851 309 aa13.49□□□□□ -0.25
PCDHGC3-204ENST00000617222 ROM1Q03395 351 aa13.49□□□□□ -0.25
PCDHGC3-204ENST00000617222 MVKQ03426 396 aa13.49□□□□□ -0.25
PCDHGC3-204ENST00000617222 TLE4Q04727 773 aa13.49□□□□□ -0.25
PCDHGC3-204ENST00000617222 EGR3Q06889 387 aa13.49□□□□□ -0.25
PCDHGC3-204ENST00000617222 DEGS2Q6QHC5 323 aa13.49□□□□□ -0.25
PCDHGC3-204ENST00000617222 ZNF704Q6ZNC4 412 aaPredicted RBP13.49□□□□□ -0.25
PCDHGC3-204ENST00000617222 ZNF679Q8IYX0 411 aa13.49□□□□□ -0.25
PCDHGC3-204ENST00000617222 STX19Q8N4C7 294 aa13.49□□□□□ -0.25
PCDHGC3-204ENST00000617222 ZNF283Q8N7M2 679 aa13.49□□□□□ -0.25
PCDHGC3-204ENST00000617222 SNX33Q8WV41 574 aa13.49□□□□□ -0.25
PCDHGC3-204ENST00000617222 ZNF799Q96GE5 643 aa13.49□□□□□ -0.25
PCDHGC3-204ENST00000617222 DCLRE1CQ96SD1 692 aaKnown RBP13.49□□□□□ -0.25
PCDHGC3-204ENST00000617222 INPP5EQ9NRR6 644 aa13.49□□□□□ -0.25
PCDHGC3-204ENST00000617222 FKBP14Q9NWM8 211 aa13.49□□□□□ -0.25
PCDHGC3-204ENST00000617222 MRM2Q9UI43 246 aaKnown RBP13.49□□□□□ -0.25
PCDHGC3-204ENST00000617222 TPRKBQ9Y3C4 175 aa13.49□□□□□ -0.25
PCDHGC3-204ENST00000617222 SPEF1Q9Y4P9 236 aa13.49□□□□□ -0.25
PCDHGC3-204ENST00000617222 LRP12Q9Y561 859 aa13.49□□□□□ -0.25
PCDHGC3-204ENST00000617222 N6AMT1Q9Y5N5 214 aa13.49□□□□□ -0.25
PCDHGC3-204ENST00000617222 A0A1W2PPR1 153 aa13.48□□□□□ -0.25
PCDHGC3-204ENST00000617222 METTL15A6NJ78 407 aa13.48□□□□□ -0.25
PCDHGC3-204ENST00000617222 ZNF254O75437 659 aa13.48□□□□□ -0.25
PCDHGC3-204ENST00000617222 NGFP01138 241 aa13.48□□□□□ -0.25
PCDHGC3-204ENST00000617222 LCATP04180 440 aa13.48□□□□□ -0.25
PCDHGC3-204ENST00000617222 KRT8P05787 483 aa13.48□□□□□ -0.25
PCDHGC3-204ENST00000617222 CCDC159P0C7I6 412 aa13.48□□□□□ -0.25
PCDHGC3-204ENST00000617222 CRHBPP24387 322 aa13.48□□□□□ -0.25
PCDHGC3-204ENST00000617222 PCSK6P29122 969 aa13.48□□□□□ -0.25
PCDHGC3-204ENST00000617222 OTX1P32242 354 aaPredicted RBP13.48□□□□□ -0.25
PCDHGC3-204ENST00000617222 RAD52P43351 418 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms