RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 PDGFAP04085 211 aa4.17□□□□□ -1.74
CHD9-221ENST00000615216 H3F3AP84243 136 aa4.17□□□□□ -1.74
CHD9-221ENST00000615216 VHLLQ6RSH7 139 aa4.17□□□□□ -1.74
CHD9-221ENST00000615216 C14orf79Q96F83 325 aa4.17□□□□□ -1.74
CHD9-221ENST00000615216 TDRD6O60522 2096 aaKnown RBP4.17□□□□□ -1.74
CHD9-221ENST00000615216 PRSS37A4D1T9 235 aa4.17□□□□□ -1.74
CHD9-221ENST00000615216 OR5H14A6NHG9 310 aa4.17□□□□□ -1.74
CHD9-221ENST00000615216 UMAD1C9J7I0 102 aa4.17□□□□□ -1.74
CHD9-221ENST00000615216 CT45A10P0DMU9 189 aa4.17□□□□□ -1.74
CHD9-221ENST00000615216 HIST1H1CP16403 213 aaKnown RBP4.17□□□□□ -1.74
CHD9-221ENST00000615216 MGMTP16455 207 aa4.17□□□□□ -1.74
CHD9-221ENST00000615216 TBXA2RP21731 343 aa4.17□□□□□ -1.74
CHD9-221ENST00000615216 CD1CP29017 333 aa4.17□□□□□ -1.74
CHD9-221ENST00000615216 GP2P55259 537 aaKnown RBP4.17□□□□□ -1.74
CHD9-221ENST00000615216 HYAL4Q2M3T9 481 aa4.17□□□□□ -1.74
CHD9-221ENST00000615216 NKAIN1Q4KMZ8 207 aa4.17□□□□□ -1.74
CHD9-221ENST00000615216 PHYHD1Q5SRE7 291 aa4.17□□□□□ -1.74
CHD9-221ENST00000615216 ANKRD33Q7Z3H0 272 aa4.17□□□□□ -1.74
CHD9-221ENST00000615216 CDH26Q8IXH8 852 aa4.17□□□□□ -1.74
CHD9-221ENST00000615216 ARHGEF39Q8N4T4 335 aa4.17□□□□□ -1.74
CHD9-221ENST00000615216 IFI44Q8TCB0 444 aa4.17□□□□□ -1.74
CHD9-221ENST00000615216 SFT2D1Q8WV19 159 aa4.17□□□□□ -1.74
CHD9-221ENST00000615216 PIGTQ969N2 578 aa4.17□□□□□ -1.74
CHD9-221ENST00000615216 CDCP1Q9H5V8 836 aa4.17□□□□□ -1.74
CHD9-221ENST00000615216 GNB4Q9HAV0 340 aa4.17□□□□□ -1.74
CHD9-221ENST00000615216 FGF20Q9NP95 211 aaPredicted RBP4.17□□□□□ -1.74
CHD9-221ENST00000615216 TRBV5-4A0A0C4DH59 114 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 M0R082 166 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 RRP8O43159 456 aaKnown RBP4.16□□□□□ -1.74
CHD9-221ENST00000615216 AKR7A3O95154 331 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 CNIH1O95406 144 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 LY86O95711 162 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 NRASP01111 189 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 KLKB1P03952 638 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 CALCRP30988 508 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 RAD52P43351 418 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 PPICP45877 212 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 CSNK1EP49674 416 aaKnown RBP4.16□□□□□ -1.74
CHD9-221ENST00000615216 RNF4P78317 190 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 AQP6Q13520 282 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 GABRG1Q8N1C3 465 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 ZNF439Q8NDP4 499 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 OR51F2Q8NH61 342 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 ZIC5Q96T25 663 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 ZDHHC5Q9C0B5 715 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 ZNF355PQ9NSJ1 428 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 SLC5A6Q9Y289 635 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 KLF13Q9Y2Y9 288 aaPredicted RBP4.16□□□□□ -1.74
CHD9-221ENST00000615216 GPR3P46089 330 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 RANP62826 216 aaKnown RBP4.16□□□□□ -1.74
CHD9-221ENST00000615216 LTC4SQ16873 150 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 C11orf91Q3C1V1 193 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 C2orf76Q3KRA6 126 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 PXDC1Q5TGL8 231 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 LAIR1Q6GTX8 287 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 ZDHHC23Q8IYP9 409 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 TCTE3Q8IZS6 198 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 CCDC74AQ96AQ1 378 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 SEC22AQ96IW7 307 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 NDFIP1Q9BT67 221 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 XIRP1Q702N8 1843 aaKnown RBP4.16□□□□□ -1.74
CHD9-221ENST00000615216 ZFP92A6NM28 416 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 LY75O60449 1722 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 ICMTO60725 284 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 CTRB1P17538 263 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 PLA1AQ53H76 456 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 CTRB2Q6GPI1 263 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 CA13Q8N1Q1 262 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 COMMD1Q8N668 190 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 ARIH2OSQ8N7S6 290 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 DTWD2Q8NBA8 298 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 SLC37A2Q8TED4 501 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 ASB16Q96NS5 453 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 A0A1W2PR48 441 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 EN2P19622 333 aaPredicted RBP4.16□□□□□ -1.74
CHD9-221ENST00000615216 PSMB6P28072 239 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 SRP9P49458 86 aaKnown RBP4.16□□□□□ -1.74
CHD9-221ENST00000615216 TPBGQ13641 420 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 SMIM21Q3B7S5 101 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 PTCRAQ6ISU1 281 aaPredicted RBP4.16□□□□□ -1.74
CHD9-221ENST00000615216 Q6ZNB5 142 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 LYG2Q86SG7 212 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 LSRQ86X29 649 aaPredicted RBP4.16□□□□□ -1.74
CHD9-221ENST00000615216 EXD3Q8N9H8 876 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 ZNF511Q8NB15 262 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 OR52I2Q8NH67 350 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 THOC3Q96J01 351 aaKnown RBP4.16□□□□□ -1.74
CHD9-221ENST00000615216 ELF4Q99607 663 aaPredicted RBP4.16□□□□□ -1.74
CHD9-221ENST00000615216 OR51I2Q9H344 312 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 HDGFL3Q9Y3E1 203 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 ANKUB1A6NFN9 424 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 PPP5D1E7EU14 171 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 NUPL2O15504 423 aaKnown RBP4.16□□□□□ -1.74
CHD9-221ENST00000615216 ZNF354AO60765 605 aaPredicted RBP4.16□□□□□ -1.74
CHD9-221ENST00000615216 ALX3O95076 343 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 RAB35Q15286 201 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 PCK2Q16822 640 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 OR8G2PQ6IF36 304 aa4.16□□□□□ -1.74
CHD9-221ENST00000615216 MFSD4AQ8N468 514 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms