RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 LINC01590Q5TEZ4 76 aa14.3□□□□□ -0.12
CBWD3-211ENST00000615061 OR10S1Q8NGN2 331 aa14.3□□□□□ -0.12
CBWD3-211ENST00000615061 PITX2Q99697 317 aa14.3□□□□□ -0.12
CBWD3-211ENST00000615061 HDHD2Q9H0R4 259 aa14.3□□□□□ -0.12
CBWD3-211ENST00000615061 MS4A5Q9H3V2 200 aa14.3□□□□□ -0.12
CBWD3-211ENST00000615061 ELOVL3Q9HB03 270 aa14.3□□□□□ -0.12
CBWD3-211ENST00000615061 PNRC2Q9NPJ4 139 aaKnown RBP14.3□□□□□ -0.12
CBWD3-211ENST00000615061 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.3□□□□□ -0.12
CBWD3-211ENST00000615061 FBXO9Q9UK97 447 aaPredicted RBP14.3□□□□□ -0.12
CBWD3-211ENST00000615061 STARD10Q9Y365 291 aa14.3□□□□□ -0.12
CBWD3-211ENST00000615061 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.3□□□□□ -0.12
CBWD3-211ENST00000615061 SURF4O15260 269 aa14.29□□□□□ -0.12
CBWD3-211ENST00000615061 NCR1O76036 304 aa14.29□□□□□ -0.12
CBWD3-211ENST00000615061 IGHV3-13P01766 116 aa14.29□□□□□ -0.12
CBWD3-211ENST00000615061 HPXP02790 462 aa14.29□□□□□ -0.12
CBWD3-211ENST00000615061 DAOP14920 347 aa14.29□□□□□ -0.12
CBWD3-211ENST00000615061 EPHA2P29317 976 aa14.29□□□□□ -0.12
CBWD3-211ENST00000615061 GCH1P30793 250 aa14.29□□□□□ -0.12
CBWD3-211ENST00000615061 MAGEB1P43366 347 aa14.29□□□□□ -0.12
CBWD3-211ENST00000615061 SELENOVP59797 346 aa14.29□□□□□ -0.12
CBWD3-211ENST00000615061 CLEC9AQ6UXN8 241 aa14.29□□□□□ -0.12
CBWD3-211ENST00000615061 HIPK1Q86Z02 1210 aa14.29□□□□□ -0.12
CBWD3-211ENST00000615061 OR2AJ1Q8NGZ0 328 aa14.29□□□□□ -0.12
CBWD3-211ENST00000615061 OR51V1Q9H2C8 321 aa14.29□□□□□ -0.12
CBWD3-211ENST00000615061 TBCCD1Q9NVR7 557 aa14.29□□□□□ -0.12
CBWD3-211ENST00000615061 H3BNX3 289 aa14.29□□□□□ -0.12
CBWD3-211ENST00000615061 FCGR1AP12314 374 aa14.29□□□□□ -0.12
CBWD3-211ENST00000615061 FMO3P31513 532 aa14.29□□□□□ -0.12
CBWD3-211ENST00000615061 PDLIM4P50479 330 aa14.29□□□□□ -0.12
CBWD3-211ENST00000615061 CRISP1P54107 249 aa14.29□□□□□ -0.12
CBWD3-211ENST00000615061 DSCR9P59020 149 aa14.29□□□□□ -0.12
CBWD3-211ENST00000615061 MBNL2Q5VZF2 373 aaKnown RBP14.29□□□□□ -0.12
CBWD3-211ENST00000615061 PLBD1Q6P4A8 553 aa14.29□□□□□ -0.12
CBWD3-211ENST00000615061 ARL9Q6T311 187 aa14.29□□□□□ -0.12
CBWD3-211ENST00000615061 ZDHHC13Q8IUH4 622 aa14.29□□□□□ -0.12
CBWD3-211ENST00000615061 NEU4Q8WWR8 484 aaPredicted RBP14.29□□□□□ -0.12
CBWD3-211ENST00000615061 COQ7Q99807 217 aa14.29□□□□□ -0.12
CBWD3-211ENST00000615061 HINT3Q9NQE9 182 aaKnown RBP14.29□□□□□ -0.12
CBWD3-211ENST00000615061 SLCO1C1Q9NYB5 712 aa14.29□□□□□ -0.12
CBWD3-211ENST00000615061 ATPIF1Q9UII2 106 aa14.29□□□□□ -0.12
CBWD3-211ENST00000615061 OAZ3Q9UMX2 235 aa14.29□□□□□ -0.12
CBWD3-211ENST00000615061 F5H5K5 113 aa14.28□□□□□ -0.12
CBWD3-211ENST00000615061 ERCC1P07992 297 aaPredicted RBP14.28□□□□□ -0.12
CBWD3-211ENST00000615061 SPARCP09486 303 aa14.28□□□□□ -0.12
CBWD3-211ENST00000615061 KRTAP1-1Q07627 177 aa14.28□□□□□ -0.12
CBWD3-211ENST00000615061 UNQ6126/PRO20091Q6UXV3 157 aa14.28□□□□□ -0.12
CBWD3-211ENST00000615061 DCXRQ7Z4W1 244 aa14.28□□□□□ -0.12
CBWD3-211ENST00000615061 NAA40Q86UY6 237 aa14.28□□□□□ -0.12
CBWD3-211ENST00000615061 PARP8Q8N3A8 854 aa14.28□□□□□ -0.12
CBWD3-211ENST00000615061 BBS1Q8NFJ9 593 aa14.28□□□□□ -0.12
CBWD3-211ENST00000615061 ATF6BQ99941 703 aa14.28□□□□□ -0.12
CBWD3-211ENST00000615061 PKP2Q99959 881 aa14.28□□□□□ -0.12
CBWD3-211ENST00000615061 SLC25A19Q9HC21 320 aa14.28□□□□□ -0.12
CBWD3-211ENST00000615061 KRT84Q9NSB2 600 aa14.28□□□□□ -0.12
CBWD3-211ENST00000615061 SAC3D1A6NKF1 404 aa14.27□□□□□ -0.12
CBWD3-211ENST00000615061 C17orf100A8MU93 164 aa14.27□□□□□ -0.12
CBWD3-211ENST00000615061 M0R129 80 aa14.27□□□□□ -0.12
CBWD3-211ENST00000615061 ZNF593O00488 134 aaPredicted RBP14.27□□□□□ -0.12
CBWD3-211ENST00000615061 ANOS1P23352 680 aa14.27□□□□□ -0.12
CBWD3-211ENST00000615061 ENTPD1P49961 510 aa14.27□□□□□ -0.12
CBWD3-211ENST00000615061 MMP15P51511 669 aa14.27□□□□□ -0.12
CBWD3-211ENST00000615061 PSG7Q13046 419 aa14.27□□□□□ -0.12
CBWD3-211ENST00000615061 PTGES3Q15185 160 aaKnown RBP14.27□□□□□ -0.12
CBWD3-211ENST00000615061 KRTAP27-1Q3LI81 207 aa14.27□□□□□ -0.12
CBWD3-211ENST00000615061 KDM4DQ6B0I6 523 aa14.27□□□□□ -0.12
CBWD3-211ENST00000615061 CPOQ8IVL8 374 aa14.27□□□□□ -0.12
CBWD3-211ENST00000615061 SNX33Q8WV41 574 aa14.27□□□□□ -0.12
CBWD3-211ENST00000615061 DNAJC9Q8WXX5 260 aa14.27□□□□□ -0.12
CBWD3-211ENST00000615061 CENPNQ96H22 339 aaPredicted RBP14.27□□□□□ -0.12
CBWD3-211ENST00000615061 GABARAPL1Q9H0R8 117 aa14.27□□□□□ -0.12
CBWD3-211ENST00000615061 TVP23BQ9NYZ1 205 aa14.27□□□□□ -0.12
CBWD3-211ENST00000615061 KCNG2Q9UJ96 466 aa14.27□□□□□ -0.12
CBWD3-211ENST00000615061 LOC390937A0A1W2PQ73 354 aa14.27□□□□□ -0.13
CBWD3-211ENST00000615061 ZSCAN5BA6NJL1 495 aa14.27□□□□□ -0.13
CBWD3-211ENST00000615061 VWC2LB2RUY7 222 aa14.27□□□□□ -0.13
CBWD3-211ENST00000615061 PRR23D1E9PI22 279 aaPredicted RBP14.27□□□□□ -0.13
CBWD3-211ENST00000615061 HMGN1P05114 100 aa14.27□□□□□ -0.13
CBWD3-211ENST00000615061 CSF3P09919 207 aa14.27□□□□□ -0.13
CBWD3-211ENST00000615061 PRR23D2P0DMB1 279 aaPredicted RBP14.27□□□□□ -0.13
CBWD3-211ENST00000615061 CCL8P80075 99 aa14.27□□□□□ -0.13
CBWD3-211ENST00000615061 HLXQ14774 488 aaPredicted RBP14.27□□□□□ -0.13
CBWD3-211ENST00000615061 PCK2Q16822 640 aa14.27□□□□□ -0.13
CBWD3-211ENST00000615061 ERI1Q8IV48 349 aaKnown RBP14.27□□□□□ -0.13
CBWD3-211ENST00000615061 UBASH3BQ8TF42 649 aa14.27□□□□□ -0.13
CBWD3-211ENST00000615061 ZMYND19Q96E35 227 aaPredicted RBP14.27□□□□□ -0.13
CBWD3-211ENST00000615061 CIB1Q99828 191 aa14.27□□□□□ -0.13
CBWD3-211ENST00000615061 BPESC1Q9GZL8 116 aa14.27□□□□□ -0.13
CBWD3-211ENST00000615061 TMEFF2Q9UIK5 374 aaPredicted RBP14.27□□□□□ -0.13
CBWD3-211ENST00000615061 GLCEO94923 617 aa14.26□□□□□ -0.13
CBWD3-211ENST00000615061 ACSM4P0C7M7 580 aa14.26□□□□□ -0.13
CBWD3-211ENST00000615061 SLC25A16P16260 332 aa14.26□□□□□ -0.13
CBWD3-211ENST00000615061 PAICSP22234 425 aaKnown RBP14.26□□□□□ -0.13
CBWD3-211ENST00000615061 COL8A2P25067 703 aa14.26□□□□□ -0.13
CBWD3-211ENST00000615061 PRSS12P56730 875 aa14.26□□□□□ -0.13
CBWD3-211ENST00000615061 SNAPC1Q16533 368 aa14.26□□□□□ -0.13
CBWD3-211ENST00000615061 KLHL12Q53G59 568 aa14.26□□□□□ -0.13
CBWD3-211ENST00000615061 SPATC1Q76KD6 591 aa14.26□□□□□ -0.13
CBWD3-211ENST00000615061 DPY19L4Q7Z388 723 aa14.26□□□□□ -0.13
CBWD3-211ENST00000615061 C1orf174Q8IYL3 243 aa14.26□□□□□ -0.13
CBWD3-211ENST00000615061 ZNF786Q8N393 782 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms