RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 PIGMQ9H3S5 423 aa7□□□□□ -1.29
PCDH9-205ENST00000614931 C1orf198Q9H425 327 aa7□□□□□ -1.29
PCDH9-205ENST00000614931 ELOVL3Q9HB03 270 aa7□□□□□ -1.29
PCDH9-205ENST00000614931 SLC24A3Q9HC58 644 aa7□□□□□ -1.29
PCDH9-205ENST00000614931 SLC17A5Q9NRA2 495 aa7□□□□□ -1.29
PCDH9-205ENST00000614931 GALNT8Q9NY28 637 aa7□□□□□ -1.29
PCDH9-205ENST00000614931 B3GNT2Q9NY97 397 aa7□□□□□ -1.29
PCDH9-205ENST00000614931 ZNF629Q9UEG4 869 aaPredicted RBP7□□□□□ -1.29
PCDH9-205ENST00000614931 KCNN3Q9UGI6 736 aa7□□□□□ -1.29
PCDH9-205ENST00000614931 SCOCQ9UIL1 159 aa7□□□□□ -1.29
PCDH9-205ENST00000614931 ST6GALNAC2Q9UJ37 374 aa7□□□□□ -1.29
PCDH9-205ENST00000614931 IKZF2Q9UKS7 526 aa7□□□□□ -1.29
PCDH9-205ENST00000614931 ERGIC3Q9Y282 383 aa7□□□□□ -1.29
PCDH9-205ENST00000614931 LRP12Q9Y561 859 aa7□□□□□ -1.29
PCDH9-205ENST00000614931 CADP27708 2225 aa7□□□□□ -1.29
PCDH9-205ENST00000614931 ARPC4-TTLL3A0A0A6YYG9 625 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 PNMA8CA0A1B0GUJ8 204 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 CIB4A0PJX0 185 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 OR6C6A6NF89 314 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 METTL15A6NJ78 407 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 DVL2O14641 736 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 PHYHO14832 338 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 DOK2O60496 412 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 RPP14O95059 124 aaKnown RBP6.99□□□□□ -1.29
PCDH9-205ENST00000614931 PNPP00491 289 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 CELA3BP08861 270 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 DBHP09172 617 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 PSMB1P20618 241 aaKnown RBP6.99□□□□□ -1.29
PCDH9-205ENST00000614931 CRYGSP22914 178 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 PSMB9P28065 219 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 LIPAP38571 399 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 KIR3DL2P43630 455 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 NANOS3P60323 173 aaKnown RBP6.99□□□□□ -1.29
PCDH9-205ENST00000614931 EGR3Q06889 387 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 FAM27E3Q08E93 113 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 RAB39AQ14964 217 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 RAB35Q15286 201 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 SPHARQ15513 63 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 MED22Q15528 200 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 TSTQ16762 297 aaKnown RBP6.99□□□□□ -1.29
PCDH9-205ENST00000614931 KRTAP27-1Q3LI81 207 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 PABPC1L2AQ5JQF8 200 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 SYT6Q5T7P8 510 aaPredicted RBP6.99□□□□□ -1.29
PCDH9-205ENST00000614931 LIPNQ5VXI9 398 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 SEZ6L2Q6UXD5 910 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 C22orf34Q6ZV56 151 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 BHLHA15Q7RTS1 189 aaPredicted RBP6.99□□□□□ -1.29
PCDH9-205ENST00000614931 KRT77Q7Z794 578 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 MDP1Q86V88 176 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 ZNF584Q8IVC4 421 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 ZNF679Q8IYX0 411 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 YIPF7Q8N8F6 280 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 CPEB3Q8NE35 698 aaKnown RBP6.99□□□□□ -1.29
PCDH9-205ENST00000614931 C1orf162Q8NEQ5 155 aaPredicted RBP6.99□□□□□ -1.29
PCDH9-205ENST00000614931 OR2AJ1Q8NGZ0 328 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 RPS4Y2Q8TD47 263 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 SNX33Q8WV41 574 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 ASB17Q8WXJ9 295 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 PPP1R14AQ96A00 147 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 BOD1Q96IK1 185 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 COG8Q96MW5 612 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 CDADC1Q9BWV3 514 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 CENPMQ9NSP4 180 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 DDX28Q9NUL7 540 aaKnown RBP6.99□□□□□ -1.29
PCDH9-205ENST00000614931 GNG8Q9UK08 70 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 TMEM14AQ9Y6G1 99 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 PKDREJQ9NTG1 2253 aa6.99□□□□□ -1.29
PCDH9-205ENST00000614931 NBPF19A0A087WUL8 3843 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 LOC100509620A0A075B734 347 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 ZNF878C9JN71 531 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 SGCEO43556 437 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 TMCC2O75069 709 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 SULT1C4O75897 302 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 FARS2O95363 451 aaKnown RBP6.98□□□□□ -1.29
PCDH9-205ENST00000614931 MT-ND5P03915 603 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 KRT8P05787 483 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 CD79AP11912 226 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 APEX1P27695 318 aaKnown RBP6.98□□□□□ -1.29
PCDH9-205ENST00000614931 OTX1P32242 354 aaPredicted RBP6.98□□□□□ -1.29
PCDH9-205ENST00000614931 PEX19P40855 299 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 GUCA1AP43080 201 aaPredicted RBP6.98□□□□□ -1.29
PCDH9-205ENST00000614931 RPL5P46777 297 aaKnown RBP6.98□□□□□ -1.29
PCDH9-205ENST00000614931 CAPZA2P47755 286 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 ASCL1P50553 236 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 PRKXP51817 358 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 RIDAP52758 137 aaKnown RBP6.98□□□□□ -1.29
PCDH9-205ENST00000614931 NR1H2P55055 460 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 ACTA2P62736 377 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 ACTG2P63267 376 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 ACSM1Q08AH1 577 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 SCRN3Q0VDG4 424 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 P2RY6Q15077 328 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 TIGD6Q17RP2 521 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 ARMCX4Q5H9R4 360 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 ELFN2Q5R3F8 820 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 SYT9Q86SS6 491 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 NAA40Q86UY6 237 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 SATL1Q86VE3 508 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 GJC3Q8NFK1 279 aa6.98□□□□□ -1.29
PCDH9-205ENST00000614931 OR13F1Q8NGS4 319 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms