RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 ZNF679Q8IYX0 411 aa10□□□□□ -0.81
SLIRP-212ENST00000613856 C1orf162Q8NEQ5 155 aaPredicted RBP10□□□□□ -0.81
SLIRP-212ENST00000613856 GJC3Q8NFK1 279 aa10□□□□□ -0.81
SLIRP-212ENST00000613856 OR1K1Q8NGR3 316 aa10□□□□□ -0.81
SLIRP-212ENST00000613856 RPS4Y2Q8TD47 263 aa10□□□□□ -0.81
SLIRP-212ENST00000613856 THEM6Q8WUY1 208 aa10□□□□□ -0.81
SLIRP-212ENST00000613856 GATAD2BQ8WXI9 593 aa10□□□□□ -0.81
SLIRP-212ENST00000613856 HTRA1Q92743 480 aa10□□□□□ -0.81
SLIRP-212ENST00000613856 TMIGD2Q96BF3 282 aa10□□□□□ -0.81
SLIRP-212ENST00000613856 SLAMF6Q96DU3 332 aa10□□□□□ -0.81
SLIRP-212ENST00000613856 YIPF6Q96EC8 236 aa10□□□□□ -0.81
SLIRP-212ENST00000613856 PELI1Q96FA3 418 aa10□□□□□ -0.81
SLIRP-212ENST00000613856 MAP6Q96JE9 813 aa10□□□□□ -0.81
SLIRP-212ENST00000613856 SPOCK3Q9BQ16 436 aa10□□□□□ -0.81
SLIRP-212ENST00000613856 TTTY10Q9BZA0 68 aa10□□□□□ -0.81
SLIRP-212ENST00000613856 RBM38Q9H0Z9 239 aaKnown RBP10□□□□□ -0.81
SLIRP-212ENST00000613856 PIGMQ9H3S5 423 aa10□□□□□ -0.81
SLIRP-212ENST00000613856 NPDC1Q9NQX5 325 aaPredicted RBP10□□□□□ -0.81
SLIRP-212ENST00000613856 DDX28Q9NUL7 540 aaKnown RBP10□□□□□ -0.81
SLIRP-212ENST00000613856 GNG8Q9UK08 70 aa10□□□□□ -0.81
SLIRP-212ENST00000613856 ZNF878C9JN71 531 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 J3QLW9 94 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 CCRL2O00421 344 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 WNT11O96014 354 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 LALBAP00709 142 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 HSMCR30P0CW71 290 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 ZNF19P17023 458 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 CD53P19397 219 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 AGAP20933 346 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 IGHV1-2P23083 117 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 DCTDP32321 178 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 LIPAP38571 399 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 TGM4P49221 684 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 GBX2P52951 348 aaPredicted RBP9.99□□□□□ -0.81
SLIRP-212ENST00000613856 FOXG1P55316 489 aaPredicted RBP9.99□□□□□ -0.81
SLIRP-212ENST00000613856 TGFBR3Q03167 851 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 GPR50Q13585 617 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 P2RY6Q15077 328 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 TSTQ16762 297 aaKnown RBP9.99□□□□□ -0.81
SLIRP-212ENST00000613856 MTFR2Q6P444 385 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 FDX2Q6P4F2 183 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 ANKRD16Q6P6B7 361 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 CORO6Q6QEF8 472 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 BEND4Q6ZU67 534 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 Q71RC1 249 aaPredicted RBP9.99□□□□□ -0.81
SLIRP-212ENST00000613856 SLC16A14Q7RTX9 510 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 KLBQ86Z14 1044 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 GABRG1Q8N1C3 465 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 OR10S1Q8NGN2 331 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 UFD1Q92890 307 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 FBXO17Q96EF6 278 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 MROQ9BYG7 248 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 FAM192AQ9GZU8 254 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 LIME1Q9H400 295 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 NIPAL2Q9H841 368 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 PNRC2Q9NPJ4 139 aaKnown RBP9.99□□□□□ -0.81
SLIRP-212ENST00000613856 ACOXLQ9NUZ1 547 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 NDUFB11Q9NX14 153 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 SLCO1C1Q9NYB5 712 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 ZNF629Q9UEG4 869 aaPredicted RBP9.99□□□□□ -0.81
SLIRP-212ENST00000613856 ATPIF1Q9UII2 106 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 ST6GALNAC2Q9UJ37 374 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 IKZF2Q9UKS7 526 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 LRP12Q9Y561 859 aa9.99□□□□□ -0.81
SLIRP-212ENST00000613856 A0A0G2JNJ9 132 aa9.98□□□□□ -0.81
SLIRP-212ENST00000613856 NKX2-6A6NCS4 301 aa9.98□□□□□ -0.81
SLIRP-212ENST00000613856 MSTNO14793 375 aa9.98□□□□□ -0.81
SLIRP-212ENST00000613856 CD1AP06126 327 aa9.98□□□□□ -0.81
SLIRP-212ENST00000613856 MMP7P09237 267 aaPredicted RBP9.98□□□□□ -0.81
SLIRP-212ENST00000613856 HOXB1P14653 301 aaPredicted RBP9.98□□□□□ -0.81
SLIRP-212ENST00000613856 RGS6P49758 472 aa9.98□□□□□ -0.81
SLIRP-212ENST00000613856 RIDAP52758 137 aaKnown RBP9.98□□□□□ -0.81
SLIRP-212ENST00000613856 GRB2P62993 217 aaKnown RBP9.98□□□□□ -0.81
SLIRP-212ENST00000613856 PMPCAQ10713 525 aa9.98□□□□□ -0.81
SLIRP-212ENST00000613856 CDK5R1Q15078 307 aa9.98□□□□□ -0.81
SLIRP-212ENST00000613856 RAB35Q15286 201 aa9.98□□□□□ -0.81
SLIRP-212ENST00000613856 SSX1Q16384 188 aa9.98□□□□□ -0.81
SLIRP-212ENST00000613856 SLC36A2Q495M3 483 aa9.98□□□□□ -0.81
SLIRP-212ENST00000613856 LIPNQ5VXI9 398 aa9.98□□□□□ -0.81
SLIRP-212ENST00000613856 DMKNQ6E0U4 476 aaPredicted RBP9.98□□□□□ -0.81
SLIRP-212ENST00000613856 RPL22L1Q6P5R6 122 aaKnown RBP9.98□□□□□ -0.81
SLIRP-212ENST00000613856 LRRN1Q6UXK5 716 aa9.98□□□□□ -0.81
SLIRP-212ENST00000613856 KRT77Q7Z794 578 aa9.98□□□□□ -0.81
SLIRP-212ENST00000613856 SKA3Q8IX90 412 aa9.98□□□□□ -0.81
SLIRP-212ENST00000613856 PHC2Q8IXK0 858 aa9.98□□□□□ -0.81
SLIRP-212ENST00000613856 CCDC36Q8IYA8 594 aa9.98□□□□□ -0.81
SLIRP-212ENST00000613856 LRRC18Q8N456 261 aa9.98□□□□□ -0.81
SLIRP-212ENST00000613856 C17orf78Q8N4C9 275 aa9.98□□□□□ -0.81
SLIRP-212ENST00000613856 ZNF433Q8N7K0 673 aaPredicted RBP9.98□□□□□ -0.81
SLIRP-212ENST00000613856 YIPF7Q8N8F6 280 aa9.98□□□□□ -0.81
SLIRP-212ENST00000613856 ZNF420Q8TAQ5 688 aaPredicted RBP9.98□□□□□ -0.81
SLIRP-212ENST00000613856 BCL2L2Q92843 193 aaPredicted RBP9.98□□□□□ -0.81
SLIRP-212ENST00000613856 RNF166Q96A37 237 aaPredicted RBP9.98□□□□□ -0.81
SLIRP-212ENST00000613856 SMR3AQ99954 134 aa9.98□□□□□ -0.81
SLIRP-212ENST00000613856 SH3GL3Q99963 347 aa9.98□□□□□ -0.81
SLIRP-212ENST00000613856 BCL7BQ9BQE9 202 aa9.98□□□□□ -0.81
SLIRP-212ENST00000613856 HDHD2Q9H0R4 259 aa9.98□□□□□ -0.81
SLIRP-212ENST00000613856 KCNN2Q9H2S1 579 aa9.98□□□□□ -0.81
SLIRP-212ENST00000613856 ELOVL3Q9HB03 270 aa9.98□□□□□ -0.81
SLIRP-212ENST00000613856 ZNF224Q9NZL3 707 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms