RNA–Protein interactions for RNA: ENST00000611833.4

NEK3-206, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,345 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-206ENST00000611833 LDLRAD4O15165 306 aa15.37■□□□□ 0.05
NEK3-206ENST00000611833 PMS2P2O95744 297 aa15.37■□□□□ 0.05
NEK3-206ENST00000611833 OR4E1P0C645 316 aa15.37■□□□□ 0.05
NEK3-206ENST00000611833 ZNF41P51814 821 aaPredicted RBP15.37■□□□□ 0.05
NEK3-206ENST00000611833 MPPED2Q15777 294 aa15.37■□□□□ 0.05
NEK3-206ENST00000611833 WDR45BQ5MNZ6 344 aa15.37■□□□□ 0.05
NEK3-206ENST00000611833 HDDC2Q7Z4H3 204 aa15.37■□□□□ 0.05
NEK3-206ENST00000611833 CDH26Q8IXH8 852 aa15.37■□□□□ 0.05
NEK3-206ENST00000611833 C11orf40Q8WZ69 217 aa15.37■□□□□ 0.05
NEK3-206ENST00000611833 SLAMF6Q96DU3 332 aa15.37■□□□□ 0.05
NEK3-206ENST00000611833 CCDC120Q96HB5 630 aa15.37■□□□□ 0.05
NEK3-206ENST00000611833 ALKBH4Q9NXW9 302 aa15.37■□□□□ 0.05
NEK3-206ENST00000611833 WNT16Q9UBV4 365 aa15.37■□□□□ 0.05
NEK3-206ENST00000611833 TMEM235A6NFC5 223 aa15.36■□□□□ 0.05
NEK3-206ENST00000611833 K7ESF4 209 aa15.36■□□□□ 0.05
NEK3-206ENST00000611833 TOX3O15405 576 aaPredicted RBP15.36■□□□□ 0.05
NEK3-206ENST00000611833 MELTFP08582 738 aa15.36■□□□□ 0.05
NEK3-206ENST00000611833 BDKRB2P30411 391 aa15.36■□□□□ 0.05
NEK3-206ENST00000611833 MMP16P51512 607 aa15.36■□□□□ 0.05
NEK3-206ENST00000611833 SCGB2B2Q4G0G5 96 aa15.36■□□□□ 0.05
NEK3-206ENST00000611833 SHDQ96IW2 340 aa15.36■□□□□ 0.05
NEK3-206ENST00000611833 DHRS9Q9BPW9 319 aa15.36■□□□□ 0.05
NEK3-206ENST00000611833 C1orf198Q9H425 327 aa15.36■□□□□ 0.05
NEK3-206ENST00000611833 B3GALT5Q9Y2C3 310 aa15.36■□□□□ 0.05
NEK3-206ENST00000611833 LOC390937A0A1W2PQ73 354 aa15.35■□□□□ 0.05
NEK3-206ENST00000611833 ACSM4P0C7M7 580 aa15.35■□□□□ 0.05
NEK3-206ENST00000611833 CAPZA1P52907 286 aa15.35■□□□□ 0.05
NEK3-206ENST00000611833 ACY1Q03154 408 aa15.35■□□□□ 0.05
NEK3-206ENST00000611833 GUSBP11Q6P575 273 aa15.35■□□□□ 0.05
NEK3-206ENST00000611833 ZNF584Q8IVC4 421 aa15.35■□□□□ 0.05
NEK3-206ENST00000611833 BPIFB2Q8N4F0 458 aa15.35■□□□□ 0.05
NEK3-206ENST00000611833 C12orf45Q8N5I9 185 aaPredicted RBP15.35■□□□□ 0.05
NEK3-206ENST00000611833 PTX4Q96A99 478 aa15.35■□□□□ 0.05
NEK3-206ENST00000611833 WDR77Q9BQA1 342 aaPredicted RBP15.35■□□□□ 0.05
NEK3-206ENST00000611833 SERINC1Q9NRX5 453 aa15.35■□□□□ 0.05
NEK3-206ENST00000611833 KCNN3Q9UGI6 736 aa15.35■□□□□ 0.05
NEK3-206ENST00000611833 GDF2Q9UK05 429 aaPredicted RBP15.35■□□□□ 0.05
NEK3-206ENST00000611833 ASCC3Q8N3C0 2202 aaKnown RBP15.35■□□□□ 0.05
NEK3-206ENST00000611833 SYT7O43581 403 aa15.35■□□□□ 0.05
NEK3-206ENST00000611833 SCO1O75880 301 aa15.35■□□□□ 0.05
NEK3-206ENST00000611833 CSN2P05814 226 aa15.35■□□□□ 0.05
NEK3-206ENST00000611833 PPP3CBP16298 524 aa15.35■□□□□ 0.05
NEK3-206ENST00000611833 ZNF28P17035 718 aa15.35■□□□□ 0.05
NEK3-206ENST00000611833 EMP2P54851 167 aa15.35■□□□□ 0.05
NEK3-206ENST00000611833 FAM69BQ5VUD6 431 aa15.35■□□□□ 0.05
NEK3-206ENST00000611833 OR5L2Q8NGL0 311 aa15.35■□□□□ 0.05
NEK3-206ENST00000611833 RBPMSQ93062 196 aaKnown RBP15.35■□□□□ 0.05
NEK3-206ENST00000611833 CNTD2Q9H8S5 307 aa15.35■□□□□ 0.05
NEK3-206ENST00000611833 SDHAF3Q9NRP4 125 aa15.35■□□□□ 0.05
NEK3-206ENST00000611833 FAM206AQ9NX38 181 aa15.35■□□□□ 0.05
NEK3-206ENST00000611833 NUP50Q9UKX7 468 aa15.35■□□□□ 0.05
NEK3-206ENST00000611833 RAB22AQ9UL26 194 aa15.35■□□□□ 0.05
NEK3-206ENST00000611833 RPH3AQ9Y2J0 694 aaPredicted RBP15.35■□□□□ 0.05
NEK3-206ENST00000611833 A0A1W2PQM1 296 aa15.34■□□□□ 0.05
NEK3-206ENST00000611833 CPED1A4D0V7 1026 aa15.34■□□□□ 0.05
NEK3-206ENST00000611833 H3BUI4 141 aa15.34■□□□□ 0.05
NEK3-206ENST00000611833 SCRG1O75711 98 aa15.34■□□□□ 0.05
NEK3-206ENST00000611833 FOSL2P15408 326 aa15.34■□□□□ 0.05
NEK3-206ENST00000611833 POU3F2P20265 443 aaPredicted RBP15.34■□□□□ 0.05
NEK3-206ENST00000611833 RAB6AP20340 208 aa15.34■□□□□ 0.05
NEK3-206ENST00000611833 M6PRP20645 277 aa15.34■□□□□ 0.05
NEK3-206ENST00000611833 SORDQ00796 357 aa15.34■□□□□ 0.05
NEK3-206ENST00000611833 ALKAL2Q6UX46 152 aa15.34■□□□□ 0.05
NEK3-206ENST00000611833 CHST4Q8NCG5 386 aa15.34■□□□□ 0.05
NEK3-206ENST00000611833 COQ8AQ8NI60 647 aa15.34■□□□□ 0.05
NEK3-206ENST00000611833 PBOV1Q9GZY1 135 aa15.34■□□□□ 0.05
NEK3-206ENST00000611833 KLK13Q9UKR3 277 aa15.34■□□□□ 0.05
NEK3-206ENST00000611833 CFAP54Q96N23 3096 aa15.34■□□□□ 0.05
NEK3-206ENST00000611833 EFNA2O43921 213 aa15.34■□□□□ 0.05
NEK3-206ENST00000611833 TTRP02766 147 aa15.34■□□□□ 0.05
NEK3-206ENST00000611833 OPN1LWP04000 364 aa15.34■□□□□ 0.05
NEK3-206ENST00000611833 NAGAP17050 411 aa15.34■□□□□ 0.05
NEK3-206ENST00000611833 MYBPHQ13203 477 aa15.34■□□□□ 0.05
NEK3-206ENST00000611833 RAB12Q6IQ22 244 aa15.34■□□□□ 0.05
NEK3-206ENST00000611833 ZNF813Q6ZN06 617 aa15.34■□□□□ 0.05
NEK3-206ENST00000611833 OR4S1Q8NGB4 309 aa15.34■□□□□ 0.05
NEK3-206ENST00000611833 RNF138Q8WVD3 245 aa15.34■□□□□ 0.05
NEK3-206ENST00000611833 ASB13Q8WXK3 278 aa15.34■□□□□ 0.05
NEK3-206ENST00000611833 METTL7AQ9H8H3 244 aa15.34■□□□□ 0.05
NEK3-206ENST00000611833 SEC61A2Q9H9S3 476 aa15.34■□□□□ 0.05
NEK3-206ENST00000611833 CYB5R1Q9UHQ9 305 aa15.34■□□□□ 0.05
NEK3-206ENST00000611833 ZNF107Q9UII5 783 aaPredicted RBP15.34■□□□□ 0.05
NEK3-206ENST00000611833 hCG_1807616A0A1W2PRN6 198 aa15.33■□□□□ 0.05
NEK3-206ENST00000611833 DISC1C4P0D8 188 aa15.33■□□□□ 0.05
NEK3-206ENST00000611833 CD74P04233 296 aa15.33■□□□□ 0.05
NEK3-206ENST00000611833 DCNP07585 359 aaKnown RBP15.33■□□□□ 0.05
NEK3-206ENST00000611833 ZNF735P0CB33 412 aa15.33■□□□□ 0.05
NEK3-206ENST00000611833 LAP3P28838 519 aa15.33■□□□□ 0.05
NEK3-206ENST00000611833 CXCL12P48061 93 aa15.33■□□□□ 0.05
NEK3-206ENST00000611833 CLRN1P58418 232 aa15.33■□□□□ 0.05
NEK3-206ENST00000611833 GPR85P60893 370 aa15.33■□□□□ 0.05
NEK3-206ENST00000611833 DCDP81605 110 aaKnown RBP15.33■□□□□ 0.05
NEK3-206ENST00000611833 NKPD1Q17RQ9 610 aa15.33■□□□□ 0.05
NEK3-206ENST00000611833 B3GNTL1Q67FW5 361 aaPredicted RBP15.33■□□□□ 0.05
NEK3-206ENST00000611833 GSG1LQ6UXU4 331 aa15.33■□□□□ 0.05
NEK3-206ENST00000611833 LYPD6Q86Y78 171 aa15.33■□□□□ 0.05
NEK3-206ENST00000611833 UEVLDQ8IX04 471 aa15.33■□□□□ 0.05
NEK3-206ENST00000611833 OR52N4Q8NGI2 321 aa15.33■□□□□ 0.05
NEK3-206ENST00000611833 FAM46BQ96A09 425 aa15.33■□□□□ 0.05
NEK3-206ENST00000611833 MRGPRX4Q96LA9 322 aa15.33■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms