RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 HIPK1Q86Z02 1210 aa22.26■■□□□ 1.15
VEGFA-226ENST00000611736 C1orf174Q8IYL3 243 aa22.26■■□□□ 1.15
VEGFA-226ENST00000611736 PYDC1Q8WXC3 89 aa22.26■■□□□ 1.15
VEGFA-226ENST00000611736 DNAJC9Q8WXX5 260 aa22.26■■□□□ 1.15
VEGFA-226ENST00000611736 GTF3AQ92664 365 aaKnown RBP22.26■■□□□ 1.15
VEGFA-226ENST00000611736 HCAR1Q9BXC0 346 aa22.26■■□□□ 1.15
VEGFA-226ENST00000611736 WDR76Q9H967 626 aa22.26■■□□□ 1.15
VEGFA-226ENST00000611736 MYOZ1Q9NP98 299 aaPredicted RBP22.26■■□□□ 1.15
VEGFA-226ENST00000611736 HINT3Q9NQE9 182 aaKnown RBP22.26■■□□□ 1.15
VEGFA-226ENST00000611736 COMMD3-BMI1R4GMX3 469 aa22.26■■□□□ 1.15
VEGFA-226ENST00000611736 SLC25A16P16260 332 aa22.25■■□□□ 1.15
VEGFA-226ENST00000611736 CDK5Q00535 292 aa22.25■■□□□ 1.15
VEGFA-226ENST00000611736 TMEM255AQ5JRV8 349 aa22.25■■□□□ 1.15
VEGFA-226ENST00000611736 MBNL2Q5VZF2 373 aaKnown RBP22.25■■□□□ 1.15
VEGFA-226ENST00000611736 PIMREGQ9BSJ6 248 aa22.25■■□□□ 1.15
VEGFA-226ENST00000611736 SEMA6AQ9H2E6 1030 aa22.25■■□□□ 1.15
VEGFA-226ENST00000611736 STARD10Q9Y365 291 aa22.25■■□□□ 1.15
VEGFA-226ENST00000611736 HIVEP2P31629 2446 aa22.24■■□□□ 1.15
VEGFA-226ENST00000611736 HMGN1P05114 100 aa22.24■■□□□ 1.15
VEGFA-226ENST00000611736 SPARCP09486 303 aa22.24■■□□□ 1.15
VEGFA-226ENST00000611736 PSKH1P11801 424 aa22.24■■□□□ 1.15
VEGFA-226ENST00000611736 PAICSP22234 425 aaKnown RBP22.24■■□□□ 1.15
VEGFA-226ENST00000611736 ACTR3P61158 418 aa22.24■■□□□ 1.15
VEGFA-226ENST00000611736 MOGQ16653 247 aa22.24■■□□□ 1.15
VEGFA-226ENST00000611736 ZDHHC13Q8IUH4 622 aa22.24■■□□□ 1.15
VEGFA-226ENST00000611736 UBASH3BQ8TF42 649 aa22.24■■□□□ 1.15
VEGFA-226ENST00000611736 MAP6Q96JE9 813 aa22.24■■□□□ 1.15
VEGFA-226ENST00000611736 DCLRE1CQ96SD1 692 aaKnown RBP22.24■■□□□ 1.15
VEGFA-226ENST00000611736 ATF6BQ99941 703 aa22.24■■□□□ 1.15
VEGFA-226ENST00000611736 PNRC2Q9NPJ4 139 aaKnown RBP22.24■■□□□ 1.15
VEGFA-226ENST00000611736 LOC390937A0A1W2PQ73 354 aa22.23■■□□□ 1.15
VEGFA-226ENST00000611736 C17orf100A8MU93 164 aa22.23■■□□□ 1.15
VEGFA-226ENST00000611736 LYNX1G3V0Z9 82 aa22.23■■□□□ 1.15
VEGFA-226ENST00000611736 H3BSA7 217 aa22.23■■□□□ 1.15
VEGFA-226ENST00000611736 SURF4O15260 269 aa22.23■■□□□ 1.15
VEGFA-226ENST00000611736 LYNX1P0DP58 116 aa22.23■■□□□ 1.15
VEGFA-226ENST00000611736 ENTPD1P49961 510 aa22.23■■□□□ 1.15
VEGFA-226ENST00000611736 PLBD1Q6P4A8 553 aa22.23■■□□□ 1.15
VEGFA-226ENST00000611736 TEX12Q9BXU0 123 aa22.23■■□□□ 1.15
VEGFA-226ENST00000611736 OR51V1Q9H2C8 321 aa22.23■■□□□ 1.15
VEGFA-226ENST00000611736 SLC25A19Q9HC21 320 aa22.23■■□□□ 1.15
VEGFA-226ENST00000611736 KRT84Q9NSB2 600 aa22.23■■□□□ 1.15
VEGFA-226ENST00000611736 SONP18583 2426 aaKnown RBP22.23■■□□□ 1.15
VEGFA-226ENST00000611736 A0A096LNT2 108 aa22.22■■□□□ 1.15
VEGFA-226ENST00000611736 PRR23D1E9PI22 279 aaPredicted RBP22.22■■□□□ 1.15
VEGFA-226ENST00000611736 F5H5K5 113 aa22.22■■□□□ 1.15
VEGFA-226ENST00000611736 MITFO75030 526 aaPredicted RBP22.22■■□□□ 1.15
VEGFA-226ENST00000611736 NCR1O76036 304 aa22.22■■□□□ 1.15
VEGFA-226ENST00000611736 HPXP02790 462 aa22.22■■□□□ 1.15
VEGFA-226ENST00000611736 MT-ND5P03915 603 aa22.22■■□□□ 1.15
VEGFA-226ENST00000611736 HEXAP06865 529 aa22.22■■□□□ 1.15
VEGFA-226ENST00000611736 PRR23D2P0DMB1 279 aaPredicted RBP22.22■■□□□ 1.15
VEGFA-226ENST00000611736 MAGEB1P43366 347 aa22.22■■□□□ 1.15
VEGFA-226ENST00000611736 CRISP1P54107 249 aa22.22■■□□□ 1.15
VEGFA-226ENST00000611736 ECH1Q13011 328 aa22.22■■□□□ 1.15
VEGFA-226ENST00000611736 RSPO1Q2MKA7 263 aaPredicted RBP22.22■■□□□ 1.15
VEGFA-226ENST00000611736 LINC01590Q5TEZ4 76 aa22.22■■□□□ 1.15
VEGFA-226ENST00000611736 PARP8Q8N3A8 854 aa22.22■■□□□ 1.15
VEGFA-226ENST00000611736 PTP4A1Q93096 173 aa22.22■■□□□ 1.15
VEGFA-226ENST00000611736 CENPNQ96H22 339 aaPredicted RBP22.22■■□□□ 1.15
VEGFA-226ENST00000611736 PLEKHA8Q96JA3 519 aa22.22■■□□□ 1.15
VEGFA-226ENST00000611736 GABARAPL1Q9H0R8 117 aa22.22■■□□□ 1.15
VEGFA-226ENST00000611736 NDUFS8O00217 210 aa22.21■■□□□ 1.15
VEGFA-226ENST00000611736 ZNF593O00488 134 aaPredicted RBP22.21■■□□□ 1.15
VEGFA-226ENST00000611736 TIMM8AO60220 97 aaPredicted RBP22.21■■□□□ 1.15
VEGFA-226ENST00000611736 NR4A2P43354 598 aa22.21■■□□□ 1.15
VEGFA-226ENST00000611736 RGS6P49758 472 aa22.21■■□□□ 1.15
VEGFA-226ENST00000611736 BLVRAP53004 296 aa22.21■■□□□ 1.15
VEGFA-226ENST00000611736 PSG7Q13046 419 aa22.21■■□□□ 1.15
VEGFA-226ENST00000611736 DCXRQ7Z4W1 244 aa22.21■■□□□ 1.15
VEGFA-226ENST00000611736 ZNF786Q8N393 782 aa22.21■■□□□ 1.15
VEGFA-226ENST00000611736 OR10S1Q8NGN2 331 aa22.21■■□□□ 1.15
VEGFA-226ENST00000611736 TVP23BQ9NYZ1 205 aa22.21■■□□□ 1.15
VEGFA-226ENST00000611736 PTTG3PQ9NZH4 202 aa22.21■■□□□ 1.15
VEGFA-226ENST00000611736 PLSCR5A0PG75 271 aa22.2■■□□□ 1.14
VEGFA-226ENST00000611736 VWC2LB2RUY7 222 aa22.2■■□□□ 1.14
VEGFA-226ENST00000611736 GSTT1P30711 240 aa22.2■■□□□ 1.14
VEGFA-226ENST00000611736 ZNF81P51508 661 aa22.2■■□□□ 1.14
VEGFA-226ENST00000611736 CCL8P80075 99 aa22.2■■□□□ 1.14
VEGFA-226ENST00000611736 GGTLC2Q14390 218 aa22.2■■□□□ 1.14
VEGFA-226ENST00000611736 KRTAP27-1Q3LI81 207 aa22.2■■□□□ 1.14
VEGFA-226ENST00000611736 ERI1Q8IV48 349 aaKnown RBP22.2■■□□□ 1.14
VEGFA-226ENST00000611736 CPOQ8IVL8 374 aa22.2■■□□□ 1.14
VEGFA-226ENST00000611736 APOBEC3DQ96AK3 386 aaPredicted RBP22.2■■□□□ 1.14
VEGFA-226ENST00000611736 CMBLQ96DG6 245 aa22.2■■□□□ 1.14
VEGFA-226ENST00000611736 COG8Q96MW5 612 aa22.2■■□□□ 1.14
VEGFA-226ENST00000611736 BPESC1Q9GZL8 116 aa22.2■■□□□ 1.14
VEGFA-226ENST00000611736 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.2■■□□□ 1.14
VEGFA-226ENST00000611736 OAZ3Q9UMX2 235 aa22.2■■□□□ 1.14
VEGFA-226ENST00000611736 FN1P02751 2386 aaKnown RBP22.19■■□□□ 1.14
VEGFA-226ENST00000611736 SAC3D1A6NKF1 404 aa22.19■■□□□ 1.14
VEGFA-226ENST00000611736 SPRY3O43610 288 aa22.19■■□□□ 1.14
VEGFA-226ENST00000611736 GLCEO94923 617 aa22.19■■□□□ 1.14
VEGFA-226ENST00000611736 ACSM4P0C7M7 580 aa22.19■■□□□ 1.14
VEGFA-226ENST00000611736 USF1P22415 310 aaPredicted RBP22.19■■□□□ 1.14
VEGFA-226ENST00000611736 TUBG1P23258 451 aa22.19■■□□□ 1.14
VEGFA-226ENST00000611736 MMP15P51511 669 aa22.19■■□□□ 1.14
VEGFA-226ENST00000611736 ESRRGP62508 458 aa22.19■■□□□ 1.14
VEGFA-226ENST00000611736 LOXL1Q08397 574 aaPredicted RBP22.19■■□□□ 1.14
VEGFA-226ENST00000611736 HLXQ14774 488 aaPredicted RBP22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms