RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 GTPBP8Q8N3Z3 284 aaPredicted RBP13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 PAQR4Q8N4S7 273 aaPredicted RBP13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 CHST4Q8NCG5 386 aa13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 HERVK_113Q902F9 699 aa13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 C12orf57Q99622 126 aa13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 SLC7A5P2Q9GIP4 190 aa13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 PRODH2Q9UF12 536 aa13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 EYSQ5T1H1 3165 aa13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 TDRD6O60522 2096 aaKnown RBP13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 FAM221BA6H8Z2 402 aa13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 F8W036 122 aa13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 CD37P11049 281 aa13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 PPICP45877 212 aa13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 NPBWR1P48145 328 aa13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 SLC37A1P57057 533 aa13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 BLOC1S1P78537 153 aa13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 HHEXQ03014 270 aa13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 MEF2DQ14814 521 aa13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 KCTD18Q6PI47 426 aaPredicted RBP13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 FAM219AQ8IW50 185 aa13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 KDM8Q8N371 416 aa13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 OR4A4PQ8NGN8 299 aa13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 TMED6Q8WW62 240 aa13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 ASB12Q8WXK4 309 aa13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 ROBO4Q8WZ75 1007 aa13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 FOXRED1Q96CU9 486 aaPredicted RBP13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 RRNAD1Q96FB5 475 aaKnown RBP13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 CYYR1Q96J86 154 aa13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 S1PR5Q9H228 398 aa13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 CNTD2Q9H8S5 307 aa13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 PNO1Q9NRX1 252 aaKnown RBP13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 ZNF629Q9UEG4 869 aaPredicted RBP13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 HHLA2Q9UM44 414 aa13.54□□□□□ -0.24
PCDHGB1-202ENST00000611598 A0A0B4J2A0 478 aa13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 C5orf51A6NDU8 294 aa13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 EFSO43281 561 aa13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 SRSF10O75494 262 aaKnown RBP13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 TNFRSF4P43489 277 aa13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 HOXA1P49639 335 aaPredicted RBP13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 PNLIPRP2P54317 469 aa13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 UNC119Q13432 240 aa13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 ARMC6Q6NXE6 501 aa13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 LYPD6Q86Y78 171 aa13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 LINC00346Q8IVM7 164 aa13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 ARMC10Q8N2F6 343 aa13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 OR4K17Q8NGC6 315 aa13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 OR52N5Q8NH56 324 aa13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 GPBAR1Q8TDU6 330 aa13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 ELP5Q8TE02 316 aa13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 DCUN1D4Q92564 292 aa13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 MRGPRX1Q96LB2 322 aa13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 GAL3ST4Q96RP7 486 aa13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 OR8D2Q9GZM6 311 aa13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 CHMP1AQ9HD42 196 aaPredicted RBP13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 SHPKQ9UHJ6 478 aa13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 COA3Q9Y2R0 106 aaPredicted RBP13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 TRAV36DV7A0A075B6V5 113 aa13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 CRHP06850 196 aa13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 SERPINF1P36955 418 aa13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 ZP2Q05996 745 aa13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 ZNF528Q3MIS6 628 aa13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 H3F3CQ6NXT2 135 aa13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 FBXO46Q6PJ61 603 aaPredicted RBP13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 RAB11FIP2Q7L804 512 aa13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 BHLHE23Q8NDY6 225 aa13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 PTPMT1Q8WUK0 201 aaPredicted RBP13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 G6PC2Q9NQR9 355 aa13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 ZNF107Q9UII5 783 aaPredicted RBP13.53□□□□□ -0.24
PCDHGB1-202ENST00000611598 P2RY10O00398 339 aa13.52□□□□□ -0.24
PCDHGB1-202ENST00000611598 HLA-DOBP13765 273 aa13.52□□□□□ -0.24
PCDHGB1-202ENST00000611598 GNB3P16520 340 aa13.52□□□□□ -0.24
PCDHGB1-202ENST00000611598 RAB13P51153 203 aa13.52□□□□□ -0.24
PCDHGB1-202ENST00000611598 B2MP61769 119 aa13.52□□□□□ -0.24
PCDHGB1-202ENST00000611598 C1orf100Q5SVJ3 147 aa13.52□□□□□ -0.24
PCDHGB1-202ENST00000611598 USB1Q9BQ65 265 aaKnown RBP13.52□□□□□ -0.24
PCDHGB1-202ENST00000611598 IGFLR1Q9H665 355 aa13.52□□□□□ -0.24
PCDHGB1-202ENST00000611598 R4GMQ9 66 aa13.52□□□□□ -0.24
PCDHGB1-202ENST00000611598 LRP4O75096 1905 aa13.52□□□□□ -0.24
PCDHGB1-202ENST00000611598 A0A0A6YYH2 397 aa13.52□□□□□ -0.25
PCDHGB1-202ENST00000611598 LOC390937A0A1W2PQ73 354 aa13.52□□□□□ -0.25
PCDHGB1-202ENST00000611598 A6NJ64 397 aa13.52□□□□□ -0.25
PCDHGB1-202ENST00000611598 PSMB6P28072 239 aa13.52□□□□□ -0.25
PCDHGB1-202ENST00000611598 ARRB1P49407 418 aaPredicted RBP13.52□□□□□ -0.25
PCDHGB1-202ENST00000611598 FMODQ06828 376 aa13.52□□□□□ -0.25
PCDHGB1-202ENST00000611598 SGCBQ16585 318 aa13.52□□□□□ -0.25
PCDHGB1-202ENST00000611598 MAMDC2Q7Z304 686 aaPredicted RBP13.52□□□□□ -0.25
PCDHGB1-202ENST00000611598 ZDHHC22Q8N966 263 aa13.52□□□□□ -0.25
PCDHGB1-202ENST00000611598 ZSCAN4Q8NAM6 433 aaPredicted RBP13.52□□□□□ -0.25
PCDHGB1-202ENST00000611598 STOML3Q8TAV4 291 aa13.52□□□□□ -0.25
PCDHGB1-202ENST00000611598 MAP3K3Q99759 626 aa13.52□□□□□ -0.25
PCDHGB1-202ENST00000611598 OR11A1Q9GZK7 315 aa13.52□□□□□ -0.25
PCDHGB1-202ENST00000611598 LAT2Q9GZY6 243 aa13.52□□□□□ -0.25
PCDHGB1-202ENST00000611598 PRR13Q9NZ81 148 aa13.52□□□□□ -0.25
PCDHGB1-202ENST00000611598 VSX1Q9NZR4 365 aaPredicted RBP13.52□□□□□ -0.25
PCDHGB1-202ENST00000611598 OR52A1Q9UKL2 312 aa13.52□□□□□ -0.25
PCDHGB1-202ENST00000611598 F8VVB4 439 aa13.51□□□□□ -0.25
PCDHGB1-202ENST00000611598 F8VWA3 439 aa13.51□□□□□ -0.25
PCDHGB1-202ENST00000611598 H0YIZ8 118 aa13.51□□□□□ -0.25
PCDHGB1-202ENST00000611598 OR2T1O43869 369 aa13.51□□□□□ -0.25
PCDHGB1-202ENST00000611598 NSA2O95478 260 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms