RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 ZNF718Q3SXZ3 478 aa10.88□□□□□ -0.67
CD9-212ENST00000610354 MBNL2Q5VZF2 373 aaKnown RBP10.88□□□□□ -0.67
CD9-212ENST00000610354 TMEM236Q5W0B7 351 aa10.88□□□□□ -0.67
CD9-212ENST00000610354 AMIGO2Q86SJ2 522 aa10.88□□□□□ -0.67
CD9-212ENST00000610354 ZNF511Q8NB15 262 aa10.88□□□□□ -0.67
CD9-212ENST00000610354 PROKR2Q8NFJ6 384 aa10.88□□□□□ -0.67
CD9-212ENST00000610354 GJC3Q8NFK1 279 aa10.88□□□□□ -0.67
CD9-212ENST00000610354 OR2T4Q8NH00 348 aa10.88□□□□□ -0.67
CD9-212ENST00000610354 OR5K1Q8NHB7 308 aa10.88□□□□□ -0.67
CD9-212ENST00000610354 TEX47Q8TBZ9 253 aa10.88□□□□□ -0.67
CD9-212ENST00000610354 LRTOMTQ8WZ04 291 aa10.88□□□□□ -0.67
CD9-212ENST00000610354 COQ7Q99807 217 aa10.88□□□□□ -0.67
CD9-212ENST00000610354 MS4A5Q9H3V2 200 aa10.88□□□□□ -0.67
CD9-212ENST00000610354 WDR76Q9H967 626 aa10.88□□□□□ -0.67
CD9-212ENST00000610354 TBCCD1Q9NVR7 557 aa10.88□□□□□ -0.67
CD9-212ENST00000610354 ATPIF1Q9UII2 106 aa10.88□□□□□ -0.67
CD9-212ENST00000610354 POLR1DQ9Y2S0 133 aa10.88□□□□□ -0.67
CD9-212ENST00000610354 GRIP1Q9Y3R0 1128 aa10.88□□□□□ -0.67
CD9-212ENST00000610354 AP4S1Q9Y587 144 aa10.88□□□□□ -0.67
CD9-212ENST00000610354 SONP18583 2426 aaKnown RBP10.88□□□□□ -0.67
CD9-212ENST00000610354 MALRD1Q5VYJ5 2156 aa10.88□□□□□ -0.67
CD9-212ENST00000610354 C17orf100A8MU93 164 aa10.87□□□□□ -0.67
CD9-212ENST00000610354 MITFO75030 526 aaPredicted RBP10.87□□□□□ -0.67
CD9-212ENST00000610354 ABHD16AO95870 558 aa10.87□□□□□ -0.67
CD9-212ENST00000610354 HLA-DQA2P01906 255 aa10.87□□□□□ -0.67
CD9-212ENST00000610354 CSF3P09919 207 aa10.87□□□□□ -0.67
CD9-212ENST00000610354 ZNF16P17020 682 aaPredicted RBP10.87□□□□□ -0.67
CD9-212ENST00000610354 HOXB4P17483 251 aaPredicted RBP10.87□□□□□ -0.67
CD9-212ENST00000610354 GIFP27352 417 aa10.87□□□□□ -0.67
CD9-212ENST00000610354 NR4A2P43354 598 aa10.87□□□□□ -0.67
CD9-212ENST00000610354 LOXL1Q08397 574 aaPredicted RBP10.87□□□□□ -0.67
CD9-212ENST00000610354 PSG7Q13046 419 aa10.87□□□□□ -0.67
CD9-212ENST00000610354 CARTPTQ16568 116 aa10.87□□□□□ -0.67
CD9-212ENST00000610354 PCK2Q16822 640 aa10.87□□□□□ -0.67
CD9-212ENST00000610354 NKPD1Q17RQ9 610 aa10.87□□□□□ -0.67
CD9-212ENST00000610354 SPRNQ5BIV9 151 aa10.87□□□□□ -0.67
CD9-212ENST00000610354 TMEM154Q6P9G4 183 aa10.87□□□□□ -0.67
CD9-212ENST00000610354 NAA40Q86UY6 237 aa10.87□□□□□ -0.67
CD9-212ENST00000610354 ZNF786Q8N393 782 aa10.87□□□□□ -0.67
CD9-212ENST00000610354 UBASH3BQ8TF42 649 aa10.87□□□□□ -0.67
CD9-212ENST00000610354 YIPF5Q969M3 257 aa10.87□□□□□ -0.67
CD9-212ENST00000610354 ELOVL3Q9HB03 270 aa10.87□□□□□ -0.67
CD9-212ENST00000610354 SLC25A19Q9HC21 320 aa10.87□□□□□ -0.67
CD9-212ENST00000610354 HINT3Q9NQE9 182 aaKnown RBP10.87□□□□□ -0.67
CD9-212ENST00000610354 COMMD3-BMI1R4GMX3 469 aa10.87□□□□□ -0.67
CD9-212ENST00000610354 HIVEP2P31629 2446 aa10.87□□□□□ -0.67
CD9-212ENST00000610354 IGHV4-61A0A0C4DH41 118 aa10.86□□□□□ -0.67
CD9-212ENST00000610354 LOC390937A0A1W2PQ73 354 aa10.86□□□□□ -0.67
CD9-212ENST00000610354 ZSCAN5BA6NJL1 495 aa10.86□□□□□ -0.67
CD9-212ENST00000610354 RIIAD1A6NNX1 92 aa10.86□□□□□ -0.67
CD9-212ENST00000610354 SURF4O15260 269 aa10.86□□□□□ -0.67
CD9-212ENST00000610354 ACSM4P0C7M7 580 aa10.86□□□□□ -0.67
CD9-212ENST00000610354 RIN1Q13671 783 aa10.86□□□□□ -0.67
CD9-212ENST00000610354 SLC27A4Q6P1M0 643 aa10.86□□□□□ -0.67
CD9-212ENST00000610354 COLCA1Q6ZS62 124 aa10.86□□□□□ -0.67
CD9-212ENST00000610354 ATG16L2Q8NAA4 619 aa10.86□□□□□ -0.67
CD9-212ENST00000610354 BPESC1Q9GZL8 116 aa10.86□□□□□ -0.67
CD9-212ENST00000610354 HDHD2Q9H0R4 259 aa10.86□□□□□ -0.67
CD9-212ENST00000610354 MYOZ1Q9NP98 299 aaPredicted RBP10.86□□□□□ -0.67
CD9-212ENST00000610354 SLCO1C1Q9NYB5 712 aa10.86□□□□□ -0.67
CD9-212ENST00000610354 C5orf63A6NC05 138 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 H0YHG0 523 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 H3BNX3 289 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 H3BSA7 217 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 NDUFS8O00217 210 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 RP2O75695 350 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 CIB2O75838 187 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 IFNGP01579 166 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 IGHV1-46P01743 117 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 ZNF823P16415 610 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 FASP25445 335 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 EPHA2P29317 976 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 GCH1P30793 250 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 FMO3P31513 532 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 ARHGDIAP52565 204 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 CRISP1P54107 249 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 SELENOVP59797 346 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 ACTR3P61158 418 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 CCL8P80075 99 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 HNRNPA0Q13151 305 aaKnown RBP10.85□□□□□ -0.67
CD9-212ENST00000610354 HLXQ14774 488 aaPredicted RBP10.85□□□□□ -0.67
CD9-212ENST00000610354 KPNB1Q14974 876 aaKnown RBP10.85□□□□□ -0.67
CD9-212ENST00000610354 TEX30Q5JUR7 227 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 Q6ZR03 302 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 C1orf174Q8IYL3 243 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 BBS1Q8NFJ9 593 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 OR2AJ1Q8NGZ0 328 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 PYDC1Q8WXC3 89 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 HAVCR1Q96D42 359 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 CMBLQ96DG6 245 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 DCLRE1CQ96SD1 692 aaKnown RBP10.85□□□□□ -0.67
CD9-212ENST00000610354 PITX2Q99697 317 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 PIMREGQ9BSJ6 248 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 CDADC1Q9BWV3 514 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 GABARAPL1Q9H0R8 117 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 SEMA6AQ9H2E6 1030 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 MARCH7Q9H992 704 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 ZNF556Q9HAH1 456 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 NKIRAS2Q9NYR9 191 aa10.85□□□□□ -0.67
CD9-212ENST00000610354 PTTG3PQ9NZH4 202 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms