RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 BBS5Q8N3I7 341 aa2.1□□□□□ -2.07
RNU6-88P-201ENST00000606801 CT45A3Q8NHU0 189 aa2.1□□□□□ -2.07
RNU6-88P-201ENST00000606801 LYPD6BQ8NI32 183 aa2.1□□□□□ -2.07
RNU6-88P-201ENST00000606801 RGP1Q92546 391 aaPredicted RBP2.1□□□□□ -2.07
RNU6-88P-201ENST00000606801 FLYWCH2Q96CP2 140 aaKnown RBP2.1□□□□□ -2.07
RNU6-88P-201ENST00000606801 ECHDC3Q96DC8 303 aa2.1□□□□□ -2.07
RNU6-88P-201ENST00000606801 ZNF317Q96PQ6 595 aaPredicted RBP2.1□□□□□ -2.07
RNU6-88P-201ENST00000606801 CHP1Q99653 195 aa2.1□□□□□ -2.07
RNU6-88P-201ENST00000606801 RNF5Q99942 180 aa2.1□□□□□ -2.07
RNU6-88P-201ENST00000606801 SAMD10Q9BYL1 202 aa2.1□□□□□ -2.07
RNU6-88P-201ENST00000606801 GEMIN7Q9H840 131 aaKnown RBP2.1□□□□□ -2.07
RNU6-88P-201ENST00000606801 EDA2RQ9HAV5 297 aa2.1□□□□□ -2.07
RNU6-88P-201ENST00000606801 FAM49BQ9NUQ9 324 aa2.1□□□□□ -2.07
RNU6-88P-201ENST00000606801 CCDC59Q9P031 241 aaKnown RBP2.1□□□□□ -2.07
RNU6-88P-201ENST00000606801 YEATS2Q9ULM3 1422 aa2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 LOXHD1Q8IVV2 1947 aa2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 CTAGE15A4D2H0 777 aa2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 C5orf63A6NC05 138 aa2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 H0YJW9 148 aa2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 DNASE2O00115 360 aaPredicted RBP2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 LSM1O15116 133 aaKnown RBP2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 VAMP5O95183 116 aa2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 AGTP01019 485 aa2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 ARG1P05089 322 aa2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 CD5P06127 495 aa2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 OR8U9P0C7N5 309 aa2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 MYL2P10916 166 aa2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 CELP19835 753 aa2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 RAB3AP20336 220 aa2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 WARSP23381 471 aaKnown RBP2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 C21orf59P57076 290 aa2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 RPS15P62841 145 aaKnown RBP2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 CCNA1P78396 465 aa2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 TRAM2Q15035 370 aa2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 SF3A2Q15428 464 aaKnown RBP2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 SMUG1Q53HV7 270 aa2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 ZNF880Q6PDB4 577 aa2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 SLC16A13Q7RTY0 426 aa2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 CTAGE6Q86UF2 777 aa2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 OR52E2Q8NGJ4 325 aa2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 OR5K2Q8NHB8 316 aa2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 LRRC29Q8WV35 223 aa2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 PTX4Q96A99 478 aa2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 NTAN1Q96AB6 310 aa2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 OR10C1Q96KK4 312 aa2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 ZNF488Q96MN9 340 aa2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 ZNF382Q96SR6 550 aa2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 MICU1Q9BPX6 476 aa2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 ZNF2Q9BSG1 426 aaPredicted RBP2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 FAM192AQ9GZU8 254 aa2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 DDX19AQ9NUU7 478 aaKnown RBP2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 MARCOQ9UEW3 520 aaPredicted RBP2.09□□□□□ -2.07
RNU6-88P-201ENST00000606801 COL1A2P08123 1366 aa2.09□□□□□ -2.08
RNU6-88P-201ENST00000606801 PALLDQ8WX93 1383 aa2.09□□□□□ -2.08
RNU6-88P-201ENST00000606801 TEX46H3BTG2 121 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 RPL36A-HNRNPH2H7BZ11 118 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 H7C1H1 209 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 K7EM74 188 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 HUS1O60921 280 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 CDH16O75309 829 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 RDH16O75452 317 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 WBP4O75554 376 aaKnown RBP2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 REM1O75628 298 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 CCNE2O96020 404 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 HLA-DQA1P01909 254 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 KRT14P02533 472 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 OR56A5P0C7T3 313 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 CTRB1P17538 263 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 DTYMKP23919 212 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 U2AF2P26368 475 aaKnown RBP eCLIP2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 OPRK1P41145 380 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 CXCL12P48061 93 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 HCAR3P49019 387 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 P2RX1P51575 399 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 PPP1CBP62140 327 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 ILKQ13418 452 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 CUL2Q13617 745 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 QPRTQ15274 297 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 C1orf185Q5T7R7 199 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 C12orf54Q6X4T0 127 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 HMGN2P46Q86SG4 172 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 CALHM1Q8IU99 346 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 WDFY1Q8IWB7 410 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 CNPY4Q8N129 248 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 RNF182Q8N6D2 247 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 PQLC3Q8N755 202 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 COX18Q8N8Q8 333 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 TMEM230Q96A57 120 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 C8orf44Q96CB5 159 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 PRRC1Q96M27 445 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 RNF145Q96MT1 663 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 CAMK2N2Q96S95 79 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 FOXC2Q99958 501 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 LZTS2Q9BRK4 669 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 RTBDNQ9BSG5 229 aaPredicted RBP2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 FGF23Q9GZV9 251 aaPredicted RBP2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 ING2Q9H160 280 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 BEX1Q9HBH7 125 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 SLC38A10Q9HBR0 1119 aa2.08□□□□□ -2.08
RNU6-88P-201ENST00000606801 ACP6Q9NPH0 428 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms