RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 SCN3BQ9NY72 215 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 SLCO1C1Q9NYB5 712 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 CNOT2Q9NZN8 540 aaKnown RBP6.66□□□□□ -1.34
MSH6-211ENST00000606499 ERVK-18Q9QC07 812 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 IKZF2Q9UKS7 526 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 DIMT1Q9UNQ2 313 aaKnown RBP6.66□□□□□ -1.34
MSH6-211ENST00000606499 LRCH1Q9Y2L9 728 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 LRP12Q9Y561 859 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 TMEM14AQ9Y6G1 99 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 CSMD2Q7Z408 3487 aa6.66□□□□□ -1.34
MSH6-211ENST00000606499 FASNP49327 2511 aaKnown RBP6.66□□□□□ -1.34
MSH6-211ENST00000606499 IGHV2OR16-5A0A0B4J2B6 119 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 IRGMA1A4Y4 181 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 F5H5K5 113 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 ABCD4O14678 606 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 PHYHO14832 338 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 CASKO14936 926 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 MT-ND2P03891 347 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 CDK1P06493 297 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 HTR1AP08908 422 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 COX5BP10606 129 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 CD40P25942 277 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 LOXP28300 417 aaPredicted RBP6.65□□□□□ -1.34
MSH6-211ENST00000606499 HSD11B1P28845 292 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 C21orf33P30042 268 aaPredicted RBP6.65□□□□□ -1.34
MSH6-211ENST00000606499 PEX19P40855 299 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 WNT5AP41221 380 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 GDI2P50395 445 aaKnown RBP6.65□□□□□ -1.34
MSH6-211ENST00000606499 PRKXP51817 358 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 CDH15P55291 814 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 CSNK2BP67870 215 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 GALK2Q01415 458 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 NAAAQ02083 359 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 ROM1Q03395 351 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 DOC2BQ14184 412 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 GALEQ14376 348 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 TAF13Q15543 124 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 TBC1D28Q2M2D7 210 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 C3orf36Q3SXR2 165 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 TP53I3Q53FA7 332 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 NCMAPQ5T1S8 102 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 ZNF684Q5T5D7 378 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 C1QTNF12Q5T7M4 302 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 SP5Q6BEB4 398 aaPredicted RBP6.65□□□□□ -1.34
MSH6-211ENST00000606499 HIST2H2BCQ6DN03 193 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 ADAM5Q6NVV9 412 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 KCTD18Q6PI47 426 aaPredicted RBP6.65□□□□□ -1.34
MSH6-211ENST00000606499 SSX8Q7RTT4 187 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 NAA40Q86UY6 237 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 STX19Q8N4C7 294 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 SNX33Q8WV41 574 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 ASB17Q8WXJ9 295 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 TMEM80Q96HE8 168 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 SIGLEC11Q96RL6 698 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 COQ7Q99807 217 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 SPOCK3Q9BQ16 436 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 ZNF649Q9BS31 505 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 ALG8Q9BVK2 526 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 JAM3Q9BX67 310 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 OR51B6Q9H340 312 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 DUSP21Q9H596 190 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 ESRP2Q9H6T0 727 aaKnown RBP6.65□□□□□ -1.34
MSH6-211ENST00000606499 ISG20L2Q9H9L3 353 aaKnown RBP6.65□□□□□ -1.34
MSH6-211ENST00000606499 CDH20Q9HBT6 801 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 NGBQ9NPG2 151 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 ACOXLQ9NUZ1 547 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 ERVK13-1Q9NX77 482 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 PLEKHB1Q9UF11 243 aaPredicted RBP6.65□□□□□ -1.34
MSH6-211ENST00000606499 CLEC2DQ9UHP7 191 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 MRM2Q9UI43 246 aaKnown RBP6.65□□□□□ -1.34
MSH6-211ENST00000606499 ATPIF1Q9UII2 106 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 GNG8Q9UK08 70 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 TPRKBQ9Y3C4 175 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 PCDHGB1Q9Y5G3 927 aa6.65□□□□□ -1.34
MSH6-211ENST00000606499 SETXQ7Z333 2677 aaKnown RBP6.65□□□□□ -1.35
MSH6-211ENST00000606499 MAP1AP78559 2803 aaPredicted RBP6.64□□□□□ -1.35
MSH6-211ENST00000606499 PRR14LQ5THK1 2151 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 C5orf63A6NC05 138 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 METTL15A6NJ78 407 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 A6NNC1 897 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 J3QLW9 94 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 M0R135 149 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 RGS10O43665 173 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 ABHD16AO95870 558 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 PLAUP00749 431 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 PTHP01270 115 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 CRYAAP02489 173 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 KRT8P05787 483 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 ACSM4P0C7M7 580 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 FAM157BP0CG42 384 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 SLC2A1P11166 492 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 ZNF35P13682 527 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 COX6B1P14854 86 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 ZNF19P17023 458 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 MYL12AP19105 171 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 EEF1B2P24534 225 aaKnown RBP6.64□□□□□ -1.35
MSH6-211ENST00000606499 PTAFRP25105 342 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 DCKP27707 260 aa6.64□□□□□ -1.35
MSH6-211ENST00000606499 OTX1P32242 354 aaPredicted RBP6.64□□□□□ -1.35
MSH6-211ENST00000606499 SLC6A9P48067 706 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms