RNA–Protein interactions for RNA: ENST00000602222.5

SMG9-213, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-213ENST00000602222 NCK1P16333 377 aa12.75□□□□□ -0.37
SMG9-213ENST00000602222 ZNF12P17014 697 aa12.75□□□□□ -0.37
SMG9-213ENST00000602222 CDKN2AP42771 156 aaKnown RBP12.75□□□□□ -0.37
SMG9-213ENST00000602222 PSME3P61289 254 aa12.75□□□□□ -0.37
SMG9-213ENST00000602222 BTG1P62324 171 aa12.75□□□□□ -0.37
SMG9-213ENST00000602222 ZMYND11Q15326 602 aa12.75□□□□□ -0.37
SMG9-213ENST00000602222 SLC27A4Q6P1M0 643 aa12.75□□□□□ -0.37
SMG9-213ENST00000602222 PGM2L1Q6PCE3 622 aa12.75□□□□□ -0.37
SMG9-213ENST00000602222 PTCHD4Q6ZW05 846 aa12.75□□□□□ -0.37
SMG9-213ENST00000602222 OR5L1Q8NGL2 311 aa12.75□□□□□ -0.37
SMG9-213ENST00000602222 RSRC1Q96IZ7 334 aaKnown RBP12.75□□□□□ -0.37
SMG9-213ENST00000602222 OR2V2Q96R30 315 aa12.75□□□□□ -0.37
SMG9-213ENST00000602222 COQ7Q99807 217 aa12.75□□□□□ -0.37
SMG9-213ENST00000602222 NUAK2Q9H093 628 aa12.75□□□□□ -0.37
SMG9-213ENST00000602222 NSRP1Q9H0G5 558 aaKnown RBP12.75□□□□□ -0.37
SMG9-213ENST00000602222 PPP1R3CQ9UQK1 317 aa12.75□□□□□ -0.37
SMG9-213ENST00000602222 TRBV4-1A0A0J9YWV2 114 aa12.74□□□□□ -0.37
SMG9-213ENST00000602222 UNC119BA6NIH7 251 aa12.74□□□□□ -0.37
SMG9-213ENST00000602222 TMEM178BH3BS89 294 aa12.74□□□□□ -0.37
SMG9-213ENST00000602222 SOCS2O14508 198 aa12.74□□□□□ -0.37
SMG9-213ENST00000602222 RER1O15258 196 aa12.74□□□□□ -0.37
SMG9-213ENST00000602222 DBHP09172 617 aa12.74□□□□□ -0.37
SMG9-213ENST00000602222 CRABP1P29762 137 aa12.74□□□□□ -0.37
SMG9-213ENST00000602222 MDH2P40926 338 aaKnown RBP12.74□□□□□ -0.37
SMG9-213ENST00000602222 ERFP50548 548 aa12.74□□□□□ -0.37
SMG9-213ENST00000602222 NUDT2P50583 147 aa12.74□□□□□ -0.37
SMG9-213ENST00000602222 RPS6KA3P51812 740 aa12.74□□□□□ -0.37
SMG9-213ENST00000602222 ZNF154Q13106 437 aa12.74□□□□□ -0.37
SMG9-213ENST00000602222 HNRNPA0Q13151 305 aaKnown RBP12.74□□□□□ -0.37
SMG9-213ENST00000602222 SEC23BQ15437 767 aa12.74□□□□□ -0.37
SMG9-213ENST00000602222 FGD3Q5JSP0 725 aa12.74□□□□□ -0.37
SMG9-213ENST00000602222 GLYATQ6IB77 296 aa12.74□□□□□ -0.37
SMG9-213ENST00000602222 ZNF771Q7L3S4 317 aaPredicted RBP12.74□□□□□ -0.37
SMG9-213ENST00000602222 C3orf56Q8N813 242 aa12.74□□□□□ -0.37
SMG9-213ENST00000602222 GJC3Q8NFK1 279 aa12.74□□□□□ -0.37
SMG9-213ENST00000602222 OR8G5Q8NG78 346 aa12.74□□□□□ -0.37
SMG9-213ENST00000602222 APOBEC3DQ96AK3 386 aaPredicted RBP12.74□□□□□ -0.37
SMG9-213ENST00000602222 CMTM5Q96DZ9 223 aa12.74□□□□□ -0.37
SMG9-213ENST00000602222 GPA33Q99795 319 aa12.74□□□□□ -0.37
SMG9-213ENST00000602222 MYLK2Q9H1R3 596 aa12.74□□□□□ -0.37
SMG9-213ENST00000602222 RERGLQ9H628 205 aa12.74□□□□□ -0.37
SMG9-213ENST00000602222 GCM1Q9NP62 436 aa12.74□□□□□ -0.37
SMG9-213ENST00000602222 KRCC1Q9NPI7 259 aaPredicted RBP12.74□□□□□ -0.37
SMG9-213ENST00000602222 IL20RAQ9UHF4 553 aa12.74□□□□□ -0.37
SMG9-213ENST00000602222 SAMD4AQ9UPU9 718 aaKnown RBP12.74□□□□□ -0.37
SMG9-213ENST00000602222 AURKCQ9UQB9 309 aa12.74□□□□□ -0.37
SMG9-213ENST00000602222 INSIG2Q9Y5U4 225 aa12.74□□□□□ -0.37
SMG9-213ENST00000602222 A0A1B0GWJ7 208 aa12.73□□□□□ -0.37
SMG9-213ENST00000602222 ARPC3O15145 178 aa12.73□□□□□ -0.37
SMG9-213ENST00000602222 FSTL3O95633 263 aa12.73□□□□□ -0.37
SMG9-213ENST00000602222 RBMXP38159 391 aaKnown RBP12.73□□□□□ -0.37
SMG9-213ENST00000602222 MMP16P51512 607 aa12.73□□□□□ -0.37
SMG9-213ENST00000602222 UBA52P62987 128 aaKnown RBP12.73□□□□□ -0.37
SMG9-213ENST00000602222 COX10Q12887 443 aa12.73□□□□□ -0.37
SMG9-213ENST00000602222 RSPO1Q2MKA7 263 aaPredicted RBP12.73□□□□□ -0.37
SMG9-213ENST00000602222 KRTAP27-1Q3LI81 207 aa12.73□□□□□ -0.37
SMG9-213ENST00000602222 OTPQ5XKR4 325 aa12.73□□□□□ -0.37
SMG9-213ENST00000602222 C1orf94Q6P1W5 598 aa12.73□□□□□ -0.37
SMG9-213ENST00000602222 DNM1P34Q6PK57 102 aa12.73□□□□□ -0.37
SMG9-213ENST00000602222 SMARCD3Q6STE5 483 aa12.73□□□□□ -0.37
SMG9-213ENST00000602222 COLCA1Q6ZS62 124 aa12.73□□□□□ -0.37
SMG9-213ENST00000602222 DOK3Q7L591 496 aa12.73□□□□□ -0.37
SMG9-213ENST00000602222 MUC20Q8N307 709 aaPredicted RBP12.73□□□□□ -0.37
SMG9-213ENST00000602222 OR13G1Q8NGZ3 307 aa12.73□□□□□ -0.37
SMG9-213ENST00000602222 SGMS2Q8NHU3 365 aa12.73□□□□□ -0.37
SMG9-213ENST00000602222 BCAS4Q8TDM0 211 aa12.73□□□□□ -0.37
SMG9-213ENST00000602222 CCT8L2Q96SF2 557 aa12.73□□□□□ -0.37
SMG9-213ENST00000602222 HDHD2Q9H0R4 259 aa12.73□□□□□ -0.37
SMG9-213ENST00000602222 GORASP2Q9H8Y8 452 aa12.73□□□□□ -0.37
SMG9-213ENST00000602222 NUP50Q9UKX7 468 aa12.73□□□□□ -0.37
SMG9-213ENST00000602222 B9D1Q9UPM9 204 aa12.73□□□□□ -0.37
SMG9-213ENST00000602222 AUP1Q9Y679 476 aa12.73□□□□□ -0.37
SMG9-213ENST00000602222 LHFPL6Q9Y693 200 aa12.73□□□□□ -0.37
SMG9-213ENST00000602222 IGLV1-36A0A0B4J1U3 117 aa12.72□□□□□ -0.37
SMG9-213ENST00000602222 DCTN6O00399 190 aa12.72□□□□□ -0.37
SMG9-213ENST00000602222 WNT2P09544 360 aa12.72□□□□□ -0.37
SMG9-213ENST00000602222 PRDX6P30041 224 aa12.72□□□□□ -0.37
SMG9-213ENST00000602222 SMIM11AP58511 58 aa12.72□□□□□ -0.37
SMG9-213ENST00000602222 SEC61A1P61619 476 aaKnown RBP12.72□□□□□ -0.37
SMG9-213ENST00000602222 PAX2Q02962 417 aa12.72□□□□□ -0.37
SMG9-213ENST00000602222 PAX8Q06710 450 aa12.72□□□□□ -0.37
SMG9-213ENST00000602222 HLXQ14774 488 aaPredicted RBP12.72□□□□□ -0.37
SMG9-213ENST00000602222 ZNF181Q2M3W8 571 aa12.72□□□□□ -0.37
SMG9-213ENST00000602222 RFX4Q33E94 735 aa12.72□□□□□ -0.37
SMG9-213ENST00000602222 KLF17Q5JT82 389 aaPredicted RBP12.72□□□□□ -0.37
SMG9-213ENST00000602222 OR2T2Q6IF00 324 aa12.72□□□□□ -0.37
SMG9-213ENST00000602222 FAM86B1Q8N7N1 296 aa12.72□□□□□ -0.37
SMG9-213ENST00000602222 ATG16L2Q8NAA4 619 aa12.72□□□□□ -0.37
SMG9-213ENST00000602222 MEGF10Q96KG7 1140 aa12.72□□□□□ -0.37
SMG9-213ENST00000602222 ZNF582Q96NG8 517 aaPredicted RBP12.72□□□□□ -0.37
SMG9-213ENST00000602222 TSSK2Q96PF2 358 aa12.72□□□□□ -0.37
SMG9-213ENST00000602222 SLC30A2Q9BRI3 323 aa12.72□□□□□ -0.37
SMG9-213ENST00000602222 SPAG4Q9NPE6 437 aa12.72□□□□□ -0.37
SMG9-213ENST00000602222 DDX28Q9NUL7 540 aaKnown RBP12.72□□□□□ -0.37
SMG9-213ENST00000602222 PTTG3PQ9NZH4 202 aa12.72□□□□□ -0.37
SMG9-213ENST00000602222 LRCH1Q9Y2L9 728 aa12.72□□□□□ -0.37
SMG9-213ENST00000602222 CEACAM18A8MTB9 384 aa12.71□□□□□ -0.37
SMG9-213ENST00000602222 IQCF6A8MYZ5 107 aa12.71□□□□□ -0.37
SMG9-213ENST00000602222 DIRAS1O95057 198 aa12.71□□□□□ -0.37
SMG9-213ENST00000602222 SEMG1P04279 462 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms