RNA–Protein interactions for RNA: ENST00000600689.1

UPF1-210, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 2

Gene UPF1, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-210ENST00000600689 SLC19A3Q9BZV2 496 aa16.47■□□□□ 0.23
UPF1-210ENST00000600689 LYRM4Q9HD34 91 aa16.47■□□□□ 0.23
UPF1-210ENST00000600689 NIT2Q9NQR4 276 aa16.47■□□□□ 0.23
UPF1-210ENST00000600689 ZFP57Q9NU63 452 aa16.47■□□□□ 0.23
UPF1-210ENST00000600689 ZMAT5Q9UDW3 170 aaKnown RBP16.47■□□□□ 0.23
UPF1-210ENST00000600689 SLC35E2P0CK97 266 aa16.47■□□□□ 0.23
UPF1-210ENST00000600689 PPT1P50897 306 aa16.47■□□□□ 0.23
UPF1-210ENST00000600689 FAM209BQ5JX69 171 aa16.47■□□□□ 0.23
UPF1-210ENST00000600689 ZNF321PQ8N8H1 164 aa16.47■□□□□ 0.23
UPF1-210ENST00000600689 OR2I1PQ8NGU4 316 aa16.47■□□□□ 0.23
UPF1-210ENST00000600689 STOML3Q8TAV4 291 aa16.47■□□□□ 0.23
UPF1-210ENST00000600689 ASB5Q8WWX0 329 aa16.47■□□□□ 0.23
UPF1-210ENST00000600689 C14orf79Q96F83 325 aa16.47■□□□□ 0.23
UPF1-210ENST00000600689 ALX4Q9H161 411 aaPredicted RBP16.47■□□□□ 0.23
UPF1-210ENST00000600689 UQCC1Q9NVA1 299 aa16.47■□□□□ 0.23
UPF1-210ENST00000600689 KIF26BQ2KJY2 2108 aa16.46■□□□□ 0.23
UPF1-210ENST00000600689 OR5K4A6NMS3 321 aa16.46■□□□□ 0.23
UPF1-210ENST00000600689 ICOSLGO75144 302 aa16.46■□□□□ 0.23
UPF1-210ENST00000600689 ZBTB25P24278 435 aa16.46■□□□□ 0.23
UPF1-210ENST00000600689 S100A10P60903 97 aa16.46■□□□□ 0.23
UPF1-210ENST00000600689 TMEM92Q6UXU6 159 aa16.46■□□□□ 0.23
UPF1-210ENST00000600689 BAP18Q8IXM2 172 aa16.46■□□□□ 0.23
UPF1-210ENST00000600689 FAM160A2Q8N612 972 aaPredicted RBP16.46■□□□□ 0.23
UPF1-210ENST00000600689 AVL9Q8NBF6 648 aa16.46■□□□□ 0.23
UPF1-210ENST00000600689 OTOSQ8NHW6 89 aa16.46■□□□□ 0.23
UPF1-210ENST00000600689 PIK3IP1Q96FE7 263 aa16.46■□□□□ 0.23
UPF1-210ENST00000600689 SCARF2Q96GP6 870 aaPredicted RBP16.46■□□□□ 0.23
UPF1-210ENST00000600689 LRFN5Q96NI6 719 aa16.46■□□□□ 0.23
UPF1-210ENST00000600689 ADOQ96SZ5 270 aa16.46■□□□□ 0.23
UPF1-210ENST00000600689 MRPS33Q9Y291 106 aaKnown RBP16.46■□□□□ 0.23
UPF1-210ENST00000600689 HIF3AQ9Y2N7 669 aa16.46■□□□□ 0.23
UPF1-210ENST00000600689 A0A1B0GV50 99 aa16.46■□□□□ 0.23
UPF1-210ENST00000600689 TXNL1O43396 289 aa16.46■□□□□ 0.23
UPF1-210ENST00000600689 SNAPINO95295 136 aa16.46■□□□□ 0.23
UPF1-210ENST00000600689 TPT1P13693 172 aaKnown RBP16.46■□□□□ 0.23
UPF1-210ENST00000600689 DAOP14920 347 aa16.46■□□□□ 0.23
UPF1-210ENST00000600689 MUC1P15941 1255 aaPredicted RBP16.46■□□□□ 0.23
UPF1-210ENST00000600689 NPY4RP50391 375 aa16.46■□□□□ 0.23
UPF1-210ENST00000600689 ZP2Q05996 745 aa16.46■□□□□ 0.23
UPF1-210ENST00000600689 ISOC2Q96AB3 205 aa16.46■□□□□ 0.23
UPF1-210ENST00000600689 DGAT2Q96PD7 388 aa16.46■□□□□ 0.23
UPF1-210ENST00000600689 P2RY10O00398 339 aa16.45■□□□□ 0.22
UPF1-210ENST00000600689 ZNF432O94892 652 aa16.45■□□□□ 0.22
UPF1-210ENST00000600689 S100A6P06703 90 aa16.45■□□□□ 0.22
UPF1-210ENST00000600689 PSMB6P28072 239 aa16.45■□□□□ 0.22
UPF1-210ENST00000600689 CD80P33681 288 aa16.45■□□□□ 0.22
UPF1-210ENST00000600689 FANCMQ8IYD8 2048 aa16.45■□□□□ 0.22
UPF1-210ENST00000600689 EFCAB7A8K855 629 aa16.45■□□□□ 0.22
UPF1-210ENST00000600689 HCRTR2O43614 444 aa16.45■□□□□ 0.22
UPF1-210ENST00000600689 RCC1P18754 421 aaPredicted RBP16.45■□□□□ 0.22
UPF1-210ENST00000600689 C1orf61Q13536 156 aa16.45■□□□□ 0.22
UPF1-210ENST00000600689 KIR2DS3Q14952 304 aa16.45■□□□□ 0.22
UPF1-210ENST00000600689 PEA15Q15121 130 aa16.45■□□□□ 0.22
UPF1-210ENST00000600689 GALNTL5Q7Z4T8 443 aa16.45■□□□□ 0.22
UPF1-210ENST00000600689 ZSCAN4Q8NAM6 433 aaPredicted RBP16.45■□□□□ 0.22
UPF1-210ENST00000600689 MRGPRFQ96AM1 343 aa16.45■□□□□ 0.22
UPF1-210ENST00000600689 ZC3H10Q96K80 434 aaKnown RBP16.45■□□□□ 0.22
UPF1-210ENST00000600689 OR8B4Q96RC9 309 aa16.45■□□□□ 0.22
UPF1-210ENST00000600689 RSRP1Q9BUV0 290 aa16.45■□□□□ 0.22
UPF1-210ENST00000600689 SMIM3Q9BZL3 60 aa16.45■□□□□ 0.22
UPF1-210ENST00000600689 KCNK7Q9Y2U2 307 aa16.45■□□□□ 0.22
UPF1-210ENST00000600689 SLC25A1P53007 311 aa16.44■□□□□ 0.22
UPF1-210ENST00000600689 RIPPLY1Q0D2K3 151 aa16.44■□□□□ 0.22
UPF1-210ENST00000600689 ZNF345Q14585 488 aa16.44■□□□□ 0.22
UPF1-210ENST00000600689 SMCO1Q147U7 214 aa16.44■□□□□ 0.22
UPF1-210ENST00000600689 EBPQ15125 230 aaKnown RBP16.44■□□□□ 0.22
UPF1-210ENST00000600689 VWA2Q5GFL6 755 aa16.44■□□□□ 0.22
UPF1-210ENST00000600689 ADGRE4PQ86SQ3 457 aa16.44■□□□□ 0.22
UPF1-210ENST00000600689 OR51F2Q8NH61 342 aa16.44■□□□□ 0.22
UPF1-210ENST00000600689 OR10A5Q9H207 317 aa16.44■□□□□ 0.22
UPF1-210ENST00000600689 TCEAL2Q9H3H9 227 aaPredicted RBP16.44■□□□□ 0.22
UPF1-210ENST00000600689 H0YIZ8 118 aa16.44■□□□□ 0.22
UPF1-210ENST00000600689 HTR3BO95264 441 aa16.44■□□□□ 0.22
UPF1-210ENST00000600689 CELA2BP08218 269 aaPredicted RBP16.44■□□□□ 0.22
UPF1-210ENST00000600689 CTLA4P16410 223 aa16.44■□□□□ 0.22
UPF1-210ENST00000600689 WBP2NLQ6ICG8 309 aa16.44■□□□□ 0.22
UPF1-210ENST00000600689 COX15Q7KZN9 410 aa16.44■□□□□ 0.22
UPF1-210ENST00000600689 PRSS58Q8IYP2 241 aa16.44■□□□□ 0.22
UPF1-210ENST00000600689 LRRC75AQ8NAA5 344 aa16.44■□□□□ 0.22
UPF1-210ENST00000600689 NUDT9Q9BW91 350 aa16.44■□□□□ 0.22
UPF1-210ENST00000600689 RTN4RQ9BZR6 473 aa16.44■□□□□ 0.22
UPF1-210ENST00000600689 RHOFQ9HBH0 211 aa16.44■□□□□ 0.22
UPF1-210ENST00000600689 OR5AC2Q9NZP5 309 aa16.44■□□□□ 0.22
UPF1-210ENST00000600689 PIAS3Q9Y6X2 628 aa16.44■□□□□ 0.22
UPF1-210ENST00000600689 RAB19A4D1S5 217 aa16.44■□□□□ 0.22
UPF1-210ENST00000600689 WIPF3A6NGB9 483 aa16.44■□□□□ 0.22
UPF1-210ENST00000600689 SLC25A4P12235 298 aa16.44■□□□□ 0.22
UPF1-210ENST00000600689 CD1CP29017 333 aa16.44■□□□□ 0.22
UPF1-210ENST00000600689 RORAP35398 523 aa16.44■□□□□ 0.22
UPF1-210ENST00000600689 NFATC4Q14934 902 aa16.44■□□□□ 0.22
UPF1-210ENST00000600689 ZNF141Q15928 474 aa16.44■□□□□ 0.22
UPF1-210ENST00000600689 EEF1A1P5Q5VTE0 462 aa16.44■□□□□ 0.22
UPF1-210ENST00000600689 CLEC9AQ6UXN8 241 aa16.44■□□□□ 0.22
UPF1-210ENST00000600689 RNF144BQ7Z419 303 aa16.44■□□□□ 0.22
UPF1-210ENST00000600689 RNF141Q8WVD5 230 aa16.44■□□□□ 0.22
UPF1-210ENST00000600689 MAFIPQ8WZ33 124 aa16.44■□□□□ 0.22
UPF1-210ENST00000600689 G6PC3Q9BUM1 346 aa16.44■□□□□ 0.22
UPF1-210ENST00000600689 ZNF304Q9HCX3 659 aa16.44■□□□□ 0.22
UPF1-210ENST00000600689 PNO1Q9NRX1 252 aaKnown RBP16.44■□□□□ 0.22
UPF1-210ENST00000600689 RPH3AQ9Y2J0 694 aaPredicted RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms