RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 SLC26A10Q8NG04 563 aa10.3□□□□□ -0.76
ARHGEF1-220ENST00000600274 OR4S1Q8NGB4 309 aa10.3□□□□□ -0.76
ARHGEF1-220ENST00000600274 OR4C16Q8NGL9 310 aa10.3□□□□□ -0.76
ARHGEF1-220ENST00000600274 OR51E1Q8TCB6 317 aa10.3□□□□□ -0.76
ARHGEF1-220ENST00000600274 ASB5Q8WWX0 329 aa10.3□□□□□ -0.76
ARHGEF1-220ENST00000600274 RAB40AQ8WXH6 277 aa10.3□□□□□ -0.76
ARHGEF1-220ENST00000600274 SLAMF6Q96DU3 332 aa10.3□□□□□ -0.76
ARHGEF1-220ENST00000600274 SCMH1Q96GD3 660 aa10.3□□□□□ -0.76
ARHGEF1-220ENST00000600274 C19orf25Q9UFG5 118 aaPredicted RBP10.3□□□□□ -0.76
ARHGEF1-220ENST00000600274 PFDN2Q9UHV9 154 aa10.3□□□□□ -0.76
ARHGEF1-220ENST00000600274 PCDHGA5Q9Y5G8 931 aa10.3□□□□□ -0.76
ARHGEF1-220ENST00000600274 WIF1Q9Y5W5 379 aa10.3□□□□□ -0.76
ARHGEF1-220ENST00000600274 CEP250Q9BV73 2442 aa10.3□□□□□ -0.76
ARHGEF1-220ENST00000600274 RIF1Q5UIP0 2472 aaKnown RBP10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 GGT3PA6NGU5 568 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 TMEM200CA6NKL6 621 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 CTAG2O75638 210 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 POU3F2P20265 443 aaPredicted RBP10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 GUCA1AP43080 201 aaPredicted RBP10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 MAP2K6P52564 334 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 CLDN17P56750 224 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 OPCMLQ14982 345 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 DEFB123Q8N688 67 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 NFAM1Q8NET5 270 aaPredicted RBP10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 ASB10Q8WXI3 467 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 ASB17Q8WXJ9 295 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 OR2M2Q96R28 347 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.29□□□□□ -0.765e-7■■■□□ 15.8
ARHGEF1-220ENST00000600274 PTGES2Q9H7Z7 377 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 COL4A2P08572 1712 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 TRBV5-5A0A0J9YX44 114 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 TMEM272A0A1B0GTI8 110 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 C9J4A7 227 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 APOBEC1P41238 236 aaKnown RBP10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 AANATQ16613 207 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 ZNF283Q8N7M2 679 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 HAVCR2Q8TDQ0 301 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 RBM24Q9BX46 236 aaKnown RBP10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 CHRNA10Q9GZZ6 450 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 MRPS18BQ9Y676 258 aaKnown RBP10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 DOCK7Q96N67 2140 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 SVILO95425 2214 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 ZNHIT1O43257 154 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 TRAPPC6AO75865 159 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 ZNF432O94892 652 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 GLSO94925 669 aaPredicted RBP10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 ECDO95905 644 aaPredicted RBP10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 AMY2AP04746 511 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 CALCBP10092 127 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 ABOP16442 354 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 RFC3P40938 356 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 TNK1Q13470 666 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 BAIAP2L2Q6UXY1 529 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 RELL2Q8NC24 303 aaPredicted RBP10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 STK35Q8TDR2 534 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 ST8SIA1Q92185 356 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 PHYHIPQ92561 330 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 PLEKHA1Q9HB21 404 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 CA10Q9NS85 328 aa10.29□□□□□ -0.76
ARHGEF1-220ENST00000600274 UBE2QL1A1L167 161 aa10.28□□□□□ -0.76
ARHGEF1-220ENST00000600274 LIPT2A6NK58 231 aa10.28□□□□□ -0.76
ARHGEF1-220ENST00000600274 FTCDNL1E5RQL4 147 aa10.28□□□□□ -0.76
ARHGEF1-220ENST00000600274 ZNF20P17024 532 aa10.28□□□□□ -0.76
ARHGEF1-220ENST00000600274 MOGAT2Q3SYC2 334 aa10.28□□□□□ -0.76
ARHGEF1-220ENST00000600274 TIGD3Q6B0B8 471 aa10.28□□□□□ -0.76
ARHGEF1-220ENST00000600274 LIN54Q6MZP7 749 aa10.28□□□□□ -0.76
ARHGEF1-220ENST00000600274 C3P1Q6ZMU1 363 aa10.28□□□□□ -0.76
ARHGEF1-220ENST00000600274 RBPMSQ93062 196 aaKnown RBP10.28□□□□□ -0.76
ARHGEF1-220ENST00000600274 SPACA9Q96E40 222 aaPredicted RBP10.28□□□□□ -0.76
ARHGEF1-220ENST00000600274 COPZ2Q9P299 210 aa10.28□□□□□ -0.76
ARHGEF1-220ENST00000600274 A6NIZ1 184 aa10.28□□□□□ -0.76
ARHGEF1-220ENST00000600274 QDPRP09417 244 aa10.28□□□□□ -0.76
ARHGEF1-220ENST00000600274 RAP1BP61224 184 aa10.28□□□□□ -0.76
ARHGEF1-220ENST00000600274 RAP1AP62834 184 aa10.28□□□□□ -0.76
ARHGEF1-220ENST00000600274 FAM57BQ71RH2 274 aa10.28□□□□□ -0.76
ARHGEF1-220ENST00000600274 BIVMQ86UB2 503 aa10.28□□□□□ -0.76
ARHGEF1-220ENST00000600274 PDCD10Q9BUL8 212 aa10.28□□□□□ -0.76
ARHGEF1-220ENST00000600274 GSX2Q9BZM3 304 aa10.28□□□□□ -0.76
ARHGEF1-220ENST00000600274 C12orf10Q9HB07 376 aa10.28□□□□□ -0.76
ARHGEF1-220ENST00000600274 DKKL1Q9UK85 242 aa10.28□□□□□ -0.76
ARHGEF1-220ENST00000600274 R4GMQ9 66 aa10.28□□□□□ -0.76
ARHGEF1-220ENST00000600274 PTPRZ1P23471 2315 aaPredicted RBP10.27□□□□□ -0.76
ARHGEF1-220ENST00000600274 LY6G6EA0A0G2JKS1 128 aa10.27□□□□□ -0.76
ARHGEF1-220ENST00000600274 LOC100289279A0A1B0GTE1 492 aa10.27□□□□□ -0.76
ARHGEF1-220ENST00000600274 CREBL2O60519 120 aaPredicted RBP10.27□□□□□ -0.76
ARHGEF1-220ENST00000600274 HCKP08631 526 aa10.27□□□□□ -0.76
ARHGEF1-220ENST00000600274 CCL3P10147 92 aa10.27□□□□□ -0.76
ARHGEF1-220ENST00000600274 FAUP35544 74 aaKnown RBP10.27□□□□□ -0.76
ARHGEF1-220ENST00000600274 STARP49675 285 aa10.27□□□□□ -0.76
ARHGEF1-220ENST00000600274 AKR1C2P52895 323 aa10.27□□□□□ -0.76
ARHGEF1-220ENST00000600274 AKR1C1Q04828 323 aa10.27□□□□□ -0.76
ARHGEF1-220ENST00000600274 PMS2CLQ68D20 193 aa10.27□□□□□ -0.76
ARHGEF1-220ENST00000600274 C3orf33Q6P1S2 294 aa10.27□□□□□ -0.76
ARHGEF1-220ENST00000600274 IDO2Q6ZQW0 420 aa10.27□□□□□ -0.76
ARHGEF1-220ENST00000600274 RNF144BQ7Z419 303 aa10.27□□□□□ -0.76
ARHGEF1-220ENST00000600274 YRDCQ86U90 279 aaKnown RBP10.27□□□□□ -0.76
ARHGEF1-220ENST00000600274 RTN4RL2Q86UN3 420 aa10.27□□□□□ -0.76
ARHGEF1-220ENST00000600274 OR52N4Q8NGI2 321 aa10.27□□□□□ -0.76
ARHGEF1-220ENST00000600274 MFSD8Q8NHS3 518 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms