RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 TAF13Q15543 124 aa12.08□□□□□ -0.48
LIG1-218ENST00000599322 RFPL4BQ6ZWI9 263 aa12.08□□□□□ -0.48
LIG1-218ENST00000599322 ZBTB46Q86UZ6 589 aa12.08□□□□□ -0.48
LIG1-218ENST00000599322 HIPK1Q86Z02 1210 aa12.08□□□□□ -0.48
LIG1-218ENST00000599322 ADGRG5Q8IZF4 528 aa12.08□□□□□ -0.48
LIG1-218ENST00000599322 SLC26A10Q8NG04 563 aa12.08□□□□□ -0.48
LIG1-218ENST00000599322 CANT1Q8WVQ1 401 aa12.08□□□□□ -0.48
LIG1-218ENST00000599322 RAB1CQ92928 201 aa12.08□□□□□ -0.48
LIG1-218ENST00000599322 SPTSSAQ969W0 71 aa12.08□□□□□ -0.48
LIG1-218ENST00000599322 APOBEC3DQ96AK3 386 aaPredicted RBP12.08□□□□□ -0.48
LIG1-218ENST00000599322 HCAR1Q9BXC0 346 aa12.08□□□□□ -0.48
LIG1-218ENST00000599322 FBN3Q75N90 2809 aa12.08□□□□□ -0.48
LIG1-218ENST00000599322 ABCA1O95477 2261 aa12.08□□□□□ -0.48
LIG1-218ENST00000599322 SONP18583 2426 aaKnown RBP12.07□□□□□ -0.48
LIG1-218ENST00000599322 OR6C68A6NDL8 312 aa12.07□□□□□ -0.48
LIG1-218ENST00000599322 ARRDC5A6NEK1 342 aa12.07□□□□□ -0.48
LIG1-218ENST00000599322 CLDN25C9JDP6 229 aa12.07□□□□□ -0.48
LIG1-218ENST00000599322 BHLHE40O14503 412 aa12.07□□□□□ -0.48
LIG1-218ENST00000599322 GAAP10253 952 aa12.07□□□□□ -0.48
LIG1-218ENST00000599322 ANPEPP15144 967 aa12.07□□□□□ -0.48
LIG1-218ENST00000599322 SELEP16581 610 aa12.07□□□□□ -0.48
LIG1-218ENST00000599322 ZNF16P17020 682 aaPredicted RBP12.07□□□□□ -0.48
LIG1-218ENST00000599322 TNFRSF1AP19438 455 aa12.07□□□□□ -0.48
LIG1-218ENST00000599322 COL8A2P25067 703 aa12.07□□□□□ -0.48
LIG1-218ENST00000599322 MPV17P39210 176 aa12.07□□□□□ -0.48
LIG1-218ENST00000599322 CRYBB2P43320 205 aa12.07□□□□□ -0.48
LIG1-218ENST00000599322 CDH15P55291 814 aa12.07□□□□□ -0.48
LIG1-218ENST00000599322 TPTEP56180 551 aa12.07□□□□□ -0.48
LIG1-218ENST00000599322 RIN1Q13671 783 aa12.07□□□□□ -0.48
LIG1-218ENST00000599322 MEP1BQ16820 701 aa12.07□□□□□ -0.48
LIG1-218ENST00000599322 CCDC92Q53HC0 331 aaPredicted RBP12.07□□□□□ -0.48
LIG1-218ENST00000599322 ZNF770Q6IQ21 691 aaPredicted RBP12.07□□□□□ -0.48
LIG1-218ENST00000599322 SLC27A4Q6P1M0 643 aa12.07□□□□□ -0.48
LIG1-218ENST00000599322 USP51Q70EK9 711 aa12.07□□□□□ -0.48
LIG1-218ENST00000599322 LNX2Q8N448 690 aa12.07□□□□□ -0.48
LIG1-218ENST00000599322 LINC01356Q8N9X3 169 aa12.07□□□□□ -0.48
LIG1-218ENST00000599322 OTULINQ96BN8 352 aa12.07□□□□□ -0.48
LIG1-218ENST00000599322 CMBLQ96DG6 245 aa12.07□□□□□ -0.48
LIG1-218ENST00000599322 FEVQ99581 238 aa12.07□□□□□ -0.48
LIG1-218ENST00000599322 MMADHCQ9H3L0 296 aaPredicted RBP12.07□□□□□ -0.48
LIG1-218ENST00000599322 ZNF275Q9NSD4 429 aaPredicted RBP12.07□□□□□ -0.48
LIG1-218ENST00000599322 TMEM160Q9NX00 188 aa12.07□□□□□ -0.48
LIG1-218ENST00000599322 PDP1Q9P0J1 537 aaPredicted RBP12.07□□□□□ -0.48
LIG1-218ENST00000599322 STARD10Q9Y365 291 aa12.07□□□□□ -0.48
LIG1-218ENST00000599322 CUBNO60494 3623 aa12.07□□□□□ -0.48
LIG1-218ENST00000599322 LRP5LA4QPB2 252 aa12.06□□□□□ -0.48
LIG1-218ENST00000599322 F5H5K5 113 aa12.06□□□□□ -0.48
LIG1-218ENST00000599322 DCTN6O00399 190 aa12.06□□□□□ -0.48
LIG1-218ENST00000599322 GSC2O15499 205 aa12.06□□□□□ -0.48
LIG1-218ENST00000599322 DEAF1O75398 565 aaPredicted RBP12.06□□□□□ -0.48
LIG1-218ENST00000599322 SOX14O95416 240 aa12.06□□□□□ -0.48
LIG1-218ENST00000599322 GPANK1O95872 356 aa12.06□□□□□ -0.48
LIG1-218ENST00000599322 TFP02787 698 aa12.06□□□□□ -0.48
LIG1-218ENST00000599322 HMGN1P05114 100 aa12.06□□□□□ -0.48
LIG1-218ENST00000599322 IGFBP1P08833 259 aaPredicted RBP12.06□□□□□ -0.48
LIG1-218ENST00000599322 ANXA8P13928 327 aa12.06□□□□□ -0.48
LIG1-218ENST00000599322 RAC2P15153 192 aa12.06□□□□□ -0.48
LIG1-218ENST00000599322 POU1F1P28069 291 aa12.06□□□□□ -0.48
LIG1-218ENST00000599322 CBX1P83916 185 aa12.06□□□□□ -0.48
LIG1-218ENST00000599322 TNFAIP6P98066 277 aaPredicted RBP12.06□□□□□ -0.48
LIG1-218ENST00000599322 PSG7Q13046 419 aa12.06□□□□□ -0.48
LIG1-218ENST00000599322 OTPQ5XKR4 325 aa12.06□□□□□ -0.48
LIG1-218ENST00000599322 CORO6Q6QEF8 472 aa12.06□□□□□ -0.48
LIG1-218ENST00000599322 CD300LDQ6UXZ3 194 aa12.06□□□□□ -0.48
LIG1-218ENST00000599322 ATG16L2Q8NAA4 619 aa12.06□□□□□ -0.48
LIG1-218ENST00000599322 CYB561A3Q8NBI2 242 aa12.06□□□□□ -0.48
LIG1-218ENST00000599322 SLC37A3Q8NCC5 494 aa12.06□□□□□ -0.48
LIG1-218ENST00000599322 CCL17Q92583 94 aa12.06□□□□□ -0.48
LIG1-218ENST00000599322 HAVCR1Q96D42 359 aa12.06□□□□□ -0.48
LIG1-218ENST00000599322 MSI2Q96DH6 328 aaKnown RBP12.06□□□□□ -0.48
LIG1-218ENST00000599322 PLEKHA8Q96JA3 519 aa12.06□□□□□ -0.48
LIG1-218ENST00000599322 ZNF582Q96NG8 517 aaPredicted RBP12.06□□□□□ -0.48
LIG1-218ENST00000599322 ATF6BQ99941 703 aa12.06□□□□□ -0.48
LIG1-218ENST00000599322 FN3KQ9H479 309 aa12.06□□□□□ -0.48
LIG1-218ENST00000599322 KIF17Q9P2E2 1029 aa12.06□□□□□ -0.48
LIG1-218ENST00000599322 DNAJB9Q9UBS3 223 aa12.06□□□□□ -0.48
LIG1-218ENST00000599322 PURGQ9UJV8 347 aaKnown RBP12.06□□□□□ -0.48
LIG1-218ENST00000599322 POMPQ9Y244 141 aa12.06□□□□□ -0.48
LIG1-218ENST00000599322 LHFPL6Q9Y693 200 aa12.06□□□□□ -0.48
LIG1-218ENST00000599322 B4DSR2 109 aa12.05□□□□□ -0.48
LIG1-218ENST00000599322 LILRA1O75019 489 aa12.05□□□□□ -0.48
LIG1-218ENST00000599322 FKBP6O75344 327 aa12.05□□□□□ -0.48
LIG1-218ENST00000599322 IGHV1-46P01743 117 aa12.05□□□□□ -0.48
LIG1-218ENST00000599322 LCATP04180 440 aa12.05□□□□□ -0.48
LIG1-218ENST00000599322 PYCR1P32322 319 aa12.05□□□□□ -0.48
LIG1-218ENST00000599322 MMP15P51511 669 aa12.05□□□□□ -0.48
LIG1-218ENST00000599322 SLC25A1P53007 311 aa12.05□□□□□ -0.48
LIG1-218ENST00000599322 HIST1H3AP68431 136 aa12.05□□□□□ -0.48
LIG1-218ENST00000599322 BNIP1Q12981 228 aa12.05□□□□□ -0.48
LIG1-218ENST00000599322 HIST2H3PS2Q5TEC6 136 aa12.05□□□□□ -0.48
LIG1-218ENST00000599322 SLC18B1Q6NT16 456 aa12.05□□□□□ -0.48
LIG1-218ENST00000599322 HIST2H3AQ71DI3 136 aa12.05□□□□□ -0.48
LIG1-218ENST00000599322 CXXC5Q7LFL8 322 aaKnown RBP12.05□□□□□ -0.48
LIG1-218ENST00000599322 LINC00346Q8IVM7 164 aa12.05□□□□□ -0.48
LIG1-218ENST00000599322 OR2Z1Q8NG97 314 aa12.05□□□□□ -0.48
LIG1-218ENST00000599322 OR6K6Q8NGW6 343 aa12.05□□□□□ -0.48
LIG1-218ENST00000599322 DNAJC9Q8WXX5 260 aa12.05□□□□□ -0.48
LIG1-218ENST00000599322 SLC7A6Q92536 515 aa12.05□□□□□ -0.48
LIG1-218ENST00000599322 SLC7A6OSQ96CW6 309 aaPredicted RBP12.05□□□□□ -0.48
LIG1-218ENST00000599322 RAB39BQ96DA2 213 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms