RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 CALCBP10092 127 aa15.06■□□□□ 0
SHKBP1-216ENST00000598201 POU3F2P20265 443 aaPredicted RBP15.06■□□□□ 0
SHKBP1-216ENST00000598201 ACHEP22303 614 aa15.06■□□□□ 0
SHKBP1-216ENST00000598201 INPP1P49441 399 aa15.06■□□□□ 0
SHKBP1-216ENST00000598201 DGCR2P98153 550 aa15.06■□□□□ 0
SHKBP1-216ENST00000598201 SGCAQ16586 387 aa15.06■□□□□ 0
SHKBP1-216ENST00000598201 C10orf128Q5T292 105 aa15.06■□□□□ 0
SHKBP1-216ENST00000598201 PRSS45Q7RTY3 260 aa15.06■□□□□ 0
SHKBP1-216ENST00000598201 CLEC1AQ8NC01 280 aa15.06■□□□□ 0
SHKBP1-216ENST00000598201 OR2V1Q8NHB1 315 aa15.06■□□□□ 0
SHKBP1-216ENST00000598201 THRSPQ92748 146 aa15.06■□□□□ 0
SHKBP1-216ENST00000598201 IP6K3Q96PC2 410 aa15.06■□□□□ 0
SHKBP1-216ENST00000598201 ZNF703Q9H7S9 590 aaPredicted RBP15.06■□□□□ 0
SHKBP1-216ENST00000598201 DDX28Q9NUL7 540 aaKnown RBP15.06■□□□□ 0
SHKBP1-216ENST00000598201 RBFOX1Q9NWB1 397 aaKnown RBP15.06■□□□□ 0
SHKBP1-216ENST00000598201 ABI3Q9P2A4 366 aa15.06■□□□□ 0
SHKBP1-216ENST00000598201 FOXD3Q9UJU5 478 aaPredicted RBP15.06■□□□□ 0
SHKBP1-216ENST00000598201 CAMK2AQ9UQM7 478 aa15.06■□□□□ 0
SHKBP1-216ENST00000598201 TMEM127O75204 238 aa15.05■□□□□ 0
SHKBP1-216ENST00000598201 CD3GP09693 182 aa15.05■□□□□ 0
SHKBP1-216ENST00000598201 ACSM4P0C7M7 580 aa15.05■□□□□ 0
SHKBP1-216ENST00000598201 PRKAR1AP10644 381 aa15.05■□□□□ 0
SHKBP1-216ENST00000598201 ANOS1P23352 680 aa15.05■□□□□ 0
SHKBP1-216ENST00000598201 NR4A2P43354 598 aa15.05■□□□□ 0
SHKBP1-216ENST00000598201 ZNF133P52736 654 aaPredicted RBP15.05■□□□□ 0
SHKBP1-216ENST00000598201 MTFR2Q6P444 385 aa15.05■□□□□ 0
SHKBP1-216ENST00000598201 UNQ6494/PRO21346Q6UXR6 183 aa15.05■□□□□ 0
SHKBP1-216ENST00000598201 ZNF704Q6ZNC4 412 aaPredicted RBP15.05■□□□□ 0
SHKBP1-216ENST00000598201 OR13C3Q8NGS6 347 aa15.05■□□□□ 0
SHKBP1-216ENST00000598201 SNIP1Q8TAD8 396 aaKnown RBP15.05■□□□□ 0
SHKBP1-216ENST00000598201 SYNPRQ8TBG9 265 aa15.05■□□□□ 0
SHKBP1-216ENST00000598201 ENKURQ8TC29 256 aa15.05■□□□□ 0
SHKBP1-216ENST00000598201 YIPF5Q969M3 257 aa15.05■□□□□ 0
SHKBP1-216ENST00000598201 ZNF837Q96EG3 531 aaPredicted RBP15.05■□□□□ 0
SHKBP1-216ENST00000598201 FER1L6-AS2Q96M78 137 aa15.05■□□□□ 0
SHKBP1-216ENST00000598201 SF3B5Q9BWJ5 86 aaKnown RBP15.05■□□□□ 0
SHKBP1-216ENST00000598201 ZNF416Q9BWM5 594 aa15.05■□□□□ 0
SHKBP1-216ENST00000598201 PBOV1Q9GZY1 135 aa15.05■□□□□ 0
SHKBP1-216ENST00000598201 ZNF716A6NP11 495 aa15.05■□□□□ -0
SHKBP1-216ENST00000598201 ZNF878C9JN71 531 aa15.05■□□□□ -0
SHKBP1-216ENST00000598201 ITGA5P08648 1049 aa15.05■□□□□ -0
SHKBP1-216ENST00000598201 IGFBP3P17936 291 aaPredicted RBP15.05■□□□□ -0
SHKBP1-216ENST00000598201 DCTDP32321 178 aa15.05■□□□□ -0
SHKBP1-216ENST00000598201 SRP9P49458 86 aaKnown RBP15.05■□□□□ -0
SHKBP1-216ENST00000598201 MMP15P51511 669 aa15.05■□□□□ -0
SHKBP1-216ENST00000598201 CLN3Q13286 438 aa15.05■□□□□ -0
SHKBP1-216ENST00000598201 KLHL24Q6TFL4 600 aa15.05■□□□□ -0
SHKBP1-216ENST00000598201 ZNF845Q96IR2 970 aaPredicted RBP15.05■□□□□ -0
SHKBP1-216ENST00000598201 ABCG5Q9H222 651 aa15.05■□□□□ -0
SHKBP1-216ENST00000598201 STEAP1Q9UHE8 339 aa15.05■□□□□ -0
SHKBP1-216ENST00000598201 FLVCR1Q9Y5Y0 555 aa15.05■□□□□ -0
SHKBP1-216ENST00000598201 ARPC4-TTLL3A0A0A6YYG9 625 aa15.04■□□□□ -0
SHKBP1-216ENST00000598201 A6NL46 340 aa15.04■□□□□ -0
SHKBP1-216ENST00000598201 CD2P06729 351 aa15.04■□□□□ -0
SHKBP1-216ENST00000598201 UBCP0CG48 685 aaKnown RBP15.04■□□□□ -0
SHKBP1-216ENST00000598201 PRKXP51817 358 aa15.04■□□□□ -0
SHKBP1-216ENST00000598201 GPR176Q14439 515 aa15.04■□□□□ -0
SHKBP1-216ENST00000598201 SLC36A2Q495M3 483 aa15.04■□□□□ -0
SHKBP1-216ENST00000598201 TMEM244Q5VVB8 128 aa15.04■□□□□ -0
SHKBP1-216ENST00000598201 AGAP6Q5VW22 663 aa15.04■□□□□ -0
SHKBP1-216ENST00000598201 MZT2BQ6NZ67 158 aa15.04■□□□□ -0
SHKBP1-216ENST00000598201 C20orf196Q8IYI0 205 aa15.04■□□□□ -0
SHKBP1-216ENST00000598201 ELMOD2Q8IZ81 293 aa15.04■□□□□ -0
SHKBP1-216ENST00000598201 PLPP7Q8NBV4 271 aa15.04■□□□□ -0
SHKBP1-216ENST00000598201 OR51A2Q8NGJ7 313 aa15.04■□□□□ -0
SHKBP1-216ENST00000598201 NABP1Q96AH0 204 aa15.04■□□□□ -0
SHKBP1-216ENST00000598201 ZC3HAV1LQ96H79 300 aaKnown RBP15.04■□□□□ -0
SHKBP1-216ENST00000598201 AGAP4Q96P64 663 aa15.04■□□□□ -0
SHKBP1-216ENST00000598201 MRI1Q9BV20 369 aa15.04■□□□□ -0
SHKBP1-216ENST00000598201 FOXJ3Q9UPW0 622 aa15.04■□□□□ -0
SHKBP1-216ENST00000598201 NCOA6Q14686 2063 aaPredicted RBP15.04■□□□□ -0
SHKBP1-216ENST00000598201 FAM166BA8MTA8 275 aa15.04■□□□□ -0
SHKBP1-216ENST00000598201 DHHO43323 396 aa15.04■□□□□ -0
SHKBP1-216ENST00000598201 TMIGD3P0DMS9 266 aaPredicted RBP15.04■□□□□ -0
SHKBP1-216ENST00000598201 NR2C1P13056 603 aa15.04■□□□□ -0
SHKBP1-216ENST00000598201 FSTP19883 344 aa15.04■□□□□ -0
SHKBP1-216ENST00000598201 PITPNAQ00169 270 aa15.04■□□□□ -0
SHKBP1-216ENST00000598201 SRSF6Q13247 344 aaKnown RBP15.04■□□□□ -0
SHKBP1-216ENST00000598201 ENDOGQ14249 297 aaKnown RBP15.04■□□□□ -0
SHKBP1-216ENST00000598201 FOXL2NBQ6ZUU3 175 aa15.04■□□□□ -0
SHKBP1-216ENST00000598201 GALNT16Q8N428 558 aa15.04■□□□□ -0
SHKBP1-216ENST00000598201 GCDHQ92947 438 aaPredicted RBP15.04■□□□□ -0
SHKBP1-216ENST00000598201 RBM24Q9BX46 236 aaKnown RBP15.04■□□□□ -0
SHKBP1-216ENST00000598201 TTTY12Q9BZ98 90 aa15.04■□□□□ -0
SHKBP1-216ENST00000598201 KCNK15Q9H427 330 aa15.04■□□□□ -0
SHKBP1-216ENST00000598201 NLKQ9UBE8 527 aa15.04■□□□□ -0
SHKBP1-216ENST00000598201 A0A0B4J293 547 aa15.03■□□□□ -0
SHKBP1-216ENST00000598201 ARGFXA6NJG6 315 aa15.03■□□□□ -0
SHKBP1-216ENST00000598201 SLC2A1P11166 492 aa15.03■□□□□ -0
SHKBP1-216ENST00000598201 MSR1P21757 451 aa15.03■□□□□ -0
SHKBP1-216ENST00000598201 CFPP27918 469 aa15.03■□□□□ -0
SHKBP1-216ENST00000598201 HSD11B1P28845 292 aa15.03■□□□□ -0
SHKBP1-216ENST00000598201 DDOSTP39656 456 aa15.03■□□□□ -0
SHKBP1-216ENST00000598201 MAGEA5P43359 124 aa15.03■□□□□ -0
SHKBP1-216ENST00000598201 TPTEP56180 551 aa15.03■□□□□ -0
SHKBP1-216ENST00000598201 PSMA6P60900 246 aaKnown RBP15.03■□□□□ -0
SHKBP1-216ENST00000598201 LSM6P62312 80 aaKnown RBP15.03■□□□□ -0
SHKBP1-216ENST00000598201 ABLIM2Q6H8Q1 611 aa15.03■□□□□ -0
SHKBP1-216ENST00000598201 BAIAP2L2Q6UXY1 529 aa15.03■□□□□ -0
SHKBP1-216ENST00000598201 RHOUQ7L0Q8 258 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms