RNA–Protein interactions for RNA: ENST00000597136.1

TRIM28-207, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 1,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-207ENST00000597136 SLC18B1Q6NT16 456 aa13.02□□□□□ -0.33
TRIM28-207ENST00000597136 SSX6Q7RTT6 188 aa13.02□□□□□ -0.33
TRIM28-207ENST00000597136 SLC16A14Q7RTX9 510 aa13.02□□□□□ -0.33
TRIM28-207ENST00000597136 DCXRQ7Z4W1 244 aa13.02□□□□□ -0.33
TRIM28-207ENST00000597136 OR2AJ1Q8NGZ0 328 aa13.02□□□□□ -0.33
TRIM28-207ENST00000597136 THEM6Q8WUY1 208 aa13.02□□□□□ -0.33
TRIM28-207ENST00000597136 LURAP1Q96LR2 239 aa13.02□□□□□ -0.33
TRIM28-207ENST00000597136 ZNF75AQ96N20 296 aa13.02□□□□□ -0.33
TRIM28-207ENST00000597136 TMEM204Q9BSN7 226 aa13.02□□□□□ -0.33
TRIM28-207ENST00000597136 ABHD6Q9BV23 337 aa13.02□□□□□ -0.33
TRIM28-207ENST00000597136 ESRP2Q9H6T0 727 aaKnown RBP13.02□□□□□ -0.33
TRIM28-207ENST00000597136 NGBQ9NPG2 151 aa13.02□□□□□ -0.33
TRIM28-207ENST00000597136 CLEC2DQ9UHP7 191 aa13.02□□□□□ -0.33
TRIM28-207ENST00000597136 GDF2Q9UK05 429 aaPredicted RBP13.02□□□□□ -0.33
TRIM28-207ENST00000597136 ZNF670-ZNF695F2Z2N8 137 aa13.01□□□□□ -0.33
TRIM28-207ENST00000597136 ABCD4O14678 606 aa13.01□□□□□ -0.33
TRIM28-207ENST00000597136 CD40P25942 277 aa13.01□□□□□ -0.33
TRIM28-207ENST00000597136 PCBD1P61457 104 aa13.01□□□□□ -0.33
TRIM28-207ENST00000597136 RAB1AP62820 205 aa13.01□□□□□ -0.33
TRIM28-207ENST00000597136 HIST1H3AP68431 136 aa13.01□□□□□ -0.33
TRIM28-207ENST00000597136 ZNF85Q03923 595 aa13.01□□□□□ -0.33
TRIM28-207ENST00000597136 EIF2B1Q14232 305 aaKnown RBP13.01□□□□□ -0.33
TRIM28-207ENST00000597136 GALEQ14376 348 aa13.01□□□□□ -0.33
TRIM28-207ENST00000597136 IRF3Q14653 427 aa13.01□□□□□ -0.33
TRIM28-207ENST00000597136 HIST2H3PS2Q5TEC6 136 aa13.01□□□□□ -0.33
TRIM28-207ENST00000597136 CFAP77Q6ZQR2 320 aa13.01□□□□□ -0.33
TRIM28-207ENST00000597136 HIST2H3AQ71DI3 136 aa13.01□□□□□ -0.33
TRIM28-207ENST00000597136 SYT9Q86SS6 491 aa13.01□□□□□ -0.33
TRIM28-207ENST00000597136 SPARTQ8N0X7 666 aa13.01□□□□□ -0.33
TRIM28-207ENST00000597136 ST7LQ8TDW4 575 aa13.01□□□□□ -0.33
TRIM28-207ENST00000597136 ASB17Q8WXJ9 295 aa13.01□□□□□ -0.33
TRIM28-207ENST00000597136 MS4A3Q96HJ5 214 aa13.01□□□□□ -0.33
TRIM28-207ENST00000597136 MAP6Q96JE9 813 aa13.01□□□□□ -0.33
TRIM28-207ENST00000597136 AMELYQ99218 206 aa13.01□□□□□ -0.33
TRIM28-207ENST00000597136 KCNN2Q9H2S1 579 aa13.01□□□□□ -0.33
TRIM28-207ENST00000597136 OBP2BQ9NPH6 170 aa13.01□□□□□ -0.33
TRIM28-207ENST00000597136 CHCHD3Q9NX63 227 aaKnown RBP13.01□□□□□ -0.33
TRIM28-207ENST00000597136 A0A087WXM4 84 aa13□□□□□ -0.33
TRIM28-207ENST00000597136 PRR32B1ATL7 298 aa13□□□□□ -0.33
TRIM28-207ENST00000597136 RER1O15258 196 aa13□□□□□ -0.33
TRIM28-207ENST00000597136 CD3EP07766 207 aa13□□□□□ -0.33
TRIM28-207ENST00000597136 MMP7P09237 267 aaPredicted RBP13□□□□□ -0.33
TRIM28-207ENST00000597136 CBR1P16152 277 aa13□□□□□ -0.33
TRIM28-207ENST00000597136 IDH3GP51553 393 aaPredicted RBP13□□□□□ -0.33
TRIM28-207ENST00000597136 ADAM5Q6NVV9 412 aa13□□□□□ -0.33
TRIM28-207ENST00000597136 TMEM154Q6P9G4 183 aa13□□□□□ -0.33
TRIM28-207ENST00000597136 ZNF322Q6U7Q0 402 aaPredicted RBP13□□□□□ -0.33
TRIM28-207ENST00000597136 ZNF704Q6ZNC4 412 aaPredicted RBP13□□□□□ -0.33
TRIM28-207ENST00000597136 CCDC36Q8IYA8 594 aa13□□□□□ -0.33
TRIM28-207ENST00000597136 GJC3Q8NFK1 279 aa13□□□□□ -0.33
TRIM28-207ENST00000597136 KBTBD8Q8NFY9 601 aa13□□□□□ -0.33
TRIM28-207ENST00000597136 WACQ9BTA9 647 aa13□□□□□ -0.33
TRIM28-207ENST00000597136 ALG8Q9BVK2 526 aa13□□□□□ -0.33
TRIM28-207ENST00000597136 C1orf198Q9H425 327 aa13□□□□□ -0.33
TRIM28-207ENST00000597136 CRNNQ9UBG3 495 aaPredicted RBP13□□□□□ -0.33
TRIM28-207ENST00000597136 TIMM10BQ9Y5J6 103 aa13□□□□□ -0.33
TRIM28-207ENST00000597136 SNX5Q9Y5X3 404 aa13□□□□□ -0.33
TRIM28-207ENST00000597136 TRIM64CA6NLI5 447 aa12.99□□□□□ -0.33
TRIM28-207ENST00000597136 SHISA9B4DS77 424 aa12.99□□□□□ -0.33
TRIM28-207ENST00000597136 PHYHO14832 338 aa12.99□□□□□ -0.33
TRIM28-207ENST00000597136 IGKV3-15P01624 115 aa12.99□□□□□ -0.33
TRIM28-207ENST00000597136 IGLV1-44P01699 117 aa12.99□□□□□ -0.33
TRIM28-207ENST00000597136 CECR9P0C854 216 aa12.99□□□□□ -0.33
TRIM28-207ENST00000597136 SMIM18P0DKX4 95 aa12.99□□□□□ -0.33
TRIM28-207ENST00000597136 ZNF32P17041 273 aa12.99□□□□□ -0.33
TRIM28-207ENST00000597136 PTAFRP25105 342 aa12.99□□□□□ -0.33
TRIM28-207ENST00000597136 MAP2K4P45985 399 aa12.99□□□□□ -0.33
TRIM28-207ENST00000597136 NR1H2P55055 460 aa12.99□□□□□ -0.33
TRIM28-207ENST00000597136 EMX1Q04741 257 aaPredicted RBP12.99□□□□□ -0.33
TRIM28-207ENST00000597136 RAB39AQ14964 217 aa12.99□□□□□ -0.33
TRIM28-207ENST00000597136 GSG1Q2KHT4 349 aa12.99□□□□□ -0.33
TRIM28-207ENST00000597136 SLC36A2Q495M3 483 aa12.99□□□□□ -0.33
TRIM28-207ENST00000597136 ZNF684Q5T5D7 378 aa12.99□□□□□ -0.33
TRIM28-207ENST00000597136 TMEM108Q6UXF1 575 aa12.99□□□□□ -0.33
TRIM28-207ENST00000597136 DPPA2Q7Z7J5 298 aa12.99□□□□□ -0.33
TRIM28-207ENST00000597136 PIAS4Q8N2W9 510 aaPredicted RBP12.99□□□□□ -0.33
TRIM28-207ENST00000597136 NANOGP1Q8N7R0 232 aa12.99□□□□□ -0.33
TRIM28-207ENST00000597136 OR10S1Q8NGN2 331 aa12.99□□□□□ -0.33
TRIM28-207ENST00000597136 SNX33Q8WV41 574 aa12.99□□□□□ -0.33
TRIM28-207ENST00000597136 RNF133Q8WVZ7 376 aa12.99□□□□□ -0.33
TRIM28-207ENST00000597136 TTTY10Q9BZA0 68 aa12.99□□□□□ -0.33
TRIM28-207ENST00000597136 PNRC2Q9NPJ4 139 aaKnown RBP12.99□□□□□ -0.33
TRIM28-207ENST00000597136 ERGIC3Q9Y282 383 aa12.99□□□□□ -0.33
TRIM28-207ENST00000597136 RNF115Q9Y4L5 304 aa12.99□□□□□ -0.33
TRIM28-207ENST00000597136 ITPR3Q14573 2671 aa12.99□□□□□ -0.33
TRIM28-207ENST00000597136 TMEM129A0AVI4 362 aa12.98□□□□□ -0.33
TRIM28-207ENST00000597136 MAGEB4O15481 346 aaPredicted RBP12.98□□□□□ -0.33
TRIM28-207ENST00000597136 GOSR1O95249 250 aa12.98□□□□□ -0.33
TRIM28-207ENST00000597136 ATP6V1B1P15313 513 aa12.98□□□□□ -0.33
TRIM28-207ENST00000597136 ZNF14P17017 642 aaPredicted RBP12.98□□□□□ -0.33
TRIM28-207ENST00000597136 PCMT1P22061 227 aa12.98□□□□□ -0.33
TRIM28-207ENST00000597136 CALCRP30988 508 aa12.98□□□□□ -0.33
TRIM28-207ENST00000597136 PSG4Q00888 419 aa12.98□□□□□ -0.33
TRIM28-207ENST00000597136 ROM1Q03395 351 aa12.98□□□□□ -0.33
TRIM28-207ENST00000597136 EGR3Q06889 387 aa12.98□□□□□ -0.33
TRIM28-207ENST00000597136 SCRN3Q0VDG4 424 aa12.98□□□□□ -0.33
TRIM28-207ENST00000597136 CDONQ4KMG0 1287 aa12.98□□□□□ -0.33
TRIM28-207ENST00000597136 CCDC92Q53HC0 331 aaPredicted RBP12.98□□□□□ -0.33
TRIM28-207ENST00000597136 KCTD18Q6PI47 426 aaPredicted RBP12.98□□□□□ -0.33
TRIM28-207ENST00000597136 SSX8Q7RTT4 187 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms