RNA–Protein interactions for RNA: ENST00000596457.1

LIG1-211, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-211ENST00000596457 DCXRQ7Z4W1 244 aa9.52□□□□□ -0.89
LIG1-211ENST00000596457 KRTAP1-3Q8IUG1 177 aa9.52□□□□□ -0.89
LIG1-211ENST00000596457 PARP8Q8N3A8 854 aa9.52□□□□□ -0.89
LIG1-211ENST00000596457 TCEANCQ8N8B7 351 aa9.52□□□□□ -0.89
LIG1-211ENST00000596457 OR6N2Q8NGY6 317 aa9.52□□□□□ -0.89
LIG1-211ENST00000596457 INTS14Q96SY0 518 aa9.52□□□□□ -0.89
LIG1-211ENST00000596457 RBM4BQ9BQ04 359 aaKnown RBP9.52□□□□□ -0.89
LIG1-211ENST00000596457 OSBPL10Q9BXB5 764 aa9.52□□□□□ -0.89
LIG1-211ENST00000596457 OR2J1Q9GZK6 312 aa9.52□□□□□ -0.89
LIG1-211ENST00000596457 HDHD2Q9H0R4 259 aa9.52□□□□□ -0.89
LIG1-211ENST00000596457 RAB1BQ9H0U4 201 aa9.52□□□□□ -0.89
LIG1-211ENST00000596457 POFUT1Q9H488 388 aa9.52□□□□□ -0.89
LIG1-211ENST00000596457 BARX1Q9HBU1 254 aaPredicted RBP9.52□□□□□ -0.89
LIG1-211ENST00000596457 DLL4Q9NR61 685 aa9.52□□□□□ -0.89
LIG1-211ENST00000596457 H2AFY2Q9P0M6 372 aaPredicted RBP9.52□□□□□ -0.89
LIG1-211ENST00000596457 CYB5R1Q9UHQ9 305 aa9.52□□□□□ -0.89
LIG1-211ENST00000596457 TMEFF2Q9UIK5 374 aaPredicted RBP9.52□□□□□ -0.89
LIG1-211ENST00000596457 STARD10Q9Y365 291 aa9.52□□□□□ -0.89
LIG1-211ENST00000596457 N6AMT1Q9Y5N5 214 aa9.52□□□□□ -0.89
LIG1-211ENST00000596457 COMMD3-BMI1R4GMX3 469 aa9.52□□□□□ -0.89
LIG1-211ENST00000596457 OR6C6A6NF89 314 aa9.51□□□□□ -0.89
LIG1-211ENST00000596457 TRIM64A6NGJ6 449 aa9.51□□□□□ -0.89
LIG1-211ENST00000596457 TRIM64BA6NI03 449 aa9.51□□□□□ -0.89
LIG1-211ENST00000596457 H7C417 338 aa9.51□□□□□ -0.89
LIG1-211ENST00000596457 EI24O14681 340 aa9.51□□□□□ -0.89
LIG1-211ENST00000596457 TLX2O43763 284 aaPredicted RBP9.51□□□□□ -0.89
LIG1-211ENST00000596457 PRKYO43930 277 aa9.51□□□□□ -0.89
LIG1-211ENST00000596457 ERCC1P07992 297 aaPredicted RBP9.51□□□□□ -0.89
LIG1-211ENST00000596457 NAT2P11245 290 aa9.51□□□□□ -0.89
LIG1-211ENST00000596457 NAA10P41227 235 aaPredicted RBP9.51□□□□□ -0.89
LIG1-211ENST00000596457 PPOXP50336 477 aa9.51□□□□□ -0.89
LIG1-211ENST00000596457 EFNA4P52798 201 aa9.51□□□□□ -0.89
LIG1-211ENST00000596457 BLVRAP53004 296 aa9.51□□□□□ -0.89
LIG1-211ENST00000596457 HIST1H3AP68431 136 aa9.51□□□□□ -0.89
LIG1-211ENST00000596457 HIST2H3PS2Q5TEC6 136 aa9.51□□□□□ -0.89
LIG1-211ENST00000596457 SLX4IPQ5VYV7 408 aa9.51□□□□□ -0.89
LIG1-211ENST00000596457 HIST2H3AQ71DI3 136 aa9.51□□□□□ -0.89
LIG1-211ENST00000596457 BCDIN3DQ7Z5W3 292 aaKnown RBP9.51□□□□□ -0.89
LIG1-211ENST00000596457 BIVMQ86UB2 503 aa9.51□□□□□ -0.89
LIG1-211ENST00000596457 NAA40Q86UY6 237 aa9.51□□□□□ -0.89
LIG1-211ENST00000596457 MAP6Q96JE9 813 aa9.51□□□□□ -0.89
LIG1-211ENST00000596457 C18orf12Q96KH6 178 aa9.51□□□□□ -0.89
LIG1-211ENST00000596457 IL4I1Q96RQ9 567 aa9.51□□□□□ -0.89
LIG1-211ENST00000596457 COQ7Q99807 217 aa9.51□□□□□ -0.89
LIG1-211ENST00000596457 ATF6BQ99941 703 aa9.51□□□□□ -0.89
LIG1-211ENST00000596457 C9orf16Q9BUW7 83 aa9.51□□□□□ -0.89
LIG1-211ENST00000596457 PRRG3Q9BZD7 231 aa9.51□□□□□ -0.89
LIG1-211ENST00000596457 PTTG3PQ9NZH4 202 aa9.51□□□□□ -0.89
LIG1-211ENST00000596457 ENOPH1Q9UHY7 261 aa9.51□□□□□ -0.89
LIG1-211ENST00000596457 KCNG2Q9UJ96 466 aa9.51□□□□□ -0.89
LIG1-211ENST00000596457 ZAR1LA6NP61 321 aa9.5□□□□□ -0.89
LIG1-211ENST00000596457 M0R233 179 aa9.5□□□□□ -0.89
LIG1-211ENST00000596457 SELENOFO60613 162 aa9.5□□□□□ -0.89
LIG1-211ENST00000596457 F12P00748 615 aaPredicted RBP9.5□□□□□ -0.89
LIG1-211ENST00000596457 LCATP04180 440 aa9.5□□□□□ -0.89
LIG1-211ENST00000596457 MRPL3P09001 348 aaKnown RBP9.5□□□□□ -0.89
LIG1-211ENST00000596457 ZNF250P15622 560 aa9.5□□□□□ -0.89
LIG1-211ENST00000596457 SLC6A9P48067 706 aa9.5□□□□□ -0.89
LIG1-211ENST00000596457 EVX1P49640 407 aa9.5□□□□□ -0.89
LIG1-211ENST00000596457 PRKXP51817 358 aa9.5□□□□□ -0.89
LIG1-211ENST00000596457 HCCSP53701 268 aa9.5□□□□□ -0.89
LIG1-211ENST00000596457 TPTEP56180 551 aa9.5□□□□□ -0.89
LIG1-211ENST00000596457 PPP2R2BQ00005 443 aa9.5□□□□□ -0.89
LIG1-211ENST00000596457 TNK1Q13470 666 aa9.5□□□□□ -0.89
LIG1-211ENST00000596457 LINC01590Q5TEZ4 76 aa9.5□□□□□ -0.89
LIG1-211ENST00000596457 C12orf73Q69YU5 71 aa9.5□□□□□ -0.89
LIG1-211ENST00000596457 DPY19L4Q7Z388 723 aa9.5□□□□□ -0.89
LIG1-211ENST00000596457 PQLC1Q8N2U9 271 aa9.5□□□□□ -0.89
LIG1-211ENST00000596457 CBR4Q8N4T8 237 aa9.5□□□□□ -0.89
LIG1-211ENST00000596457 ZNF525Q8N782 197 aa9.5□□□□□ -0.89
LIG1-211ENST00000596457 OR10S1Q8NGN2 331 aa9.5□□□□□ -0.89
LIG1-211ENST00000596457 KLF14Q8TD94 323 aaPredicted RBP9.5□□□□□ -0.89
LIG1-211ENST00000596457 THEM6Q8WUY1 208 aa9.5□□□□□ -0.89
LIG1-211ENST00000596457 SNX33Q8WV41 574 aa9.5□□□□□ -0.89
LIG1-211ENST00000596457 IPCEF1Q8WWN9 437 aaPredicted RBP9.5□□□□□ -0.89
LIG1-211ENST00000596457 GTF3AQ92664 365 aaKnown RBP9.5□□□□□ -0.89
LIG1-211ENST00000596457 SLAMF6Q96DU3 332 aa9.5□□□□□ -0.89
LIG1-211ENST00000596457 MARS2Q96GW9 593 aaKnown RBP9.5□□□□□ -0.89
LIG1-211ENST00000596457 DCLRE1CQ96SD1 692 aaKnown RBP9.5□□□□□ -0.89
LIG1-211ENST00000596457 RHNO1Q9BSD3 238 aa9.5□□□□□ -0.89
LIG1-211ENST00000596457 COPS4Q9BT78 406 aa9.5□□□□□ -0.89
LIG1-211ENST00000596457 GPR160Q9UJ42 338 aa9.5□□□□□ -0.89
LIG1-211ENST00000596457 ARFGEF3Q5TH69 2177 aa9.49□□□□□ -0.89
LIG1-211ENST00000596457 RNF223E7ERA6 249 aa9.49□□□□□ -0.89
LIG1-211ENST00000596457 LYNX1G3V0Z9 82 aa9.49□□□□□ -0.89
LIG1-211ENST00000596457 H7C1Q1 480 aa9.49□□□□□ -0.89
LIG1-211ENST00000596457 PRODHO43272 600 aa9.49□□□□□ -0.89
LIG1-211ENST00000596457 TPD52L2O43399 206 aaKnown RBP9.49□□□□□ -0.89
LIG1-211ENST00000596457 TIMM8AO60220 97 aaPredicted RBP9.49□□□□□ -0.89
LIG1-211ENST00000596457 LYNX1P0DP58 116 aa9.49□□□□□ -0.89
LIG1-211ENST00000596457 ALDH3A2P51648 485 aa9.49□□□□□ -0.89
LIG1-211ENST00000596457 RAD23AP54725 363 aa9.49□□□□□ -0.89
LIG1-211ENST00000596457 ECH1Q13011 328 aa9.49□□□□□ -0.89
LIG1-211ENST00000596457 HLXQ14774 488 aaPredicted RBP9.49□□□□□ -0.89
LIG1-211ENST00000596457 MOGQ16653 247 aa9.49□□□□□ -0.89
LIG1-211ENST00000596457 TSTQ16762 297 aaKnown RBP9.49□□□□□ -0.89
LIG1-211ENST00000596457 RSPO1Q2MKA7 263 aaPredicted RBP9.49□□□□□ -0.89
LIG1-211ENST00000596457 SLC35D3Q5M8T2 416 aa9.49□□□□□ -0.89
LIG1-211ENST00000596457 LCN1P1Q5VSP4 162 aa9.49□□□□□ -0.89
LIG1-211ENST00000596457 CLEC2AQ6UVW9 174 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms