RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 SLC22A31A6NKX4 558 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 OVOL3O00110 214 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 SMPD2O60906 423 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 ABHD16AO95870 558 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 CRYAAP02489 173 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 SPARCP09486 303 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 DBTP11182 482 aaKnown RBP9.09□□□□□ -0.95
LIG1-210ENST00000596332 CD53P19397 219 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 ROM1Q03395 351 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 MVKQ03426 396 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 ZNF91Q05481 1191 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 IL18R1Q13478 541 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 DOC2BQ14184 412 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 EIF2B1Q14232 305 aaKnown RBP9.09□□□□□ -0.95
LIG1-210ENST00000596332 ALKBH6Q3KRA9 238 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 MEDAGQ5VYS4 303 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 KRT80Q6KB66 452 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 SLC22A25Q6T423 547 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 IZUMO2Q6UXV1 221 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 RFPL4BQ6ZWI9 263 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 SHFQ7M4L6 423 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 DTX2Q86UW9 622 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 GID4Q8IVV7 300 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 DEPDC4Q8N2C3 294 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 ZNF555Q8NEP9 628 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 OR10H5Q8NGA6 315 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 OR51G2Q8NGK0 314 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 MARS2Q96GW9 593 aaKnown RBP9.09□□□□□ -0.95
LIG1-210ENST00000596332 RADILQ96JH8 1075 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 C4orf45Q96LM5 186 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 CDADC1Q9BWV3 514 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 C1QTNF5Q9BXJ0 243 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 HDHD2Q9H0R4 259 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 C1orf198Q9H425 327 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 ZNF442Q9H7R0 627 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 CA10Q9NS85 328 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 FKBP14Q9NWM8 211 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 SLCO1C1Q9NYB5 712 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 MYEF2Q9P2K5 600 aaKnown RBP9.09□□□□□ -0.95
LIG1-210ENST00000596332 HSPE1-MOB4S4R3N1 261 aa9.09□□□□□ -0.95
LIG1-210ENST00000596332 IGLV3-9A0A075B6K5 115 aa9.08□□□□□ -0.96
LIG1-210ENST00000596332 A0A1W2PQL4 384 aaPredicted RBP9.08□□□□□ -0.96
LIG1-210ENST00000596332 MPZL2O60487 215 aa9.08□□□□□ -0.96
LIG1-210ENST00000596332 ATE1O95260 518 aa9.08□□□□□ -0.96
LIG1-210ENST00000596332 PTHP01270 115 aa9.08□□□□□ -0.96
LIG1-210ENST00000596332 FAM157BP0CG42 384 aa9.08□□□□□ -0.96
LIG1-210ENST00000596332 MYF6P23409 242 aa9.08□□□□□ -0.96
LIG1-210ENST00000596332 TTKP33981 857 aa9.08□□□□□ -0.96
LIG1-210ENST00000596332 APLNRP35414 380 aa9.08□□□□□ -0.96
LIG1-210ENST00000596332 GLRXP35754 106 aa9.08□□□□□ -0.96
LIG1-210ENST00000596332 VHLP40337 213 aa9.08□□□□□ -0.96
LIG1-210ENST00000596332 HTR5AP47898 357 aa9.08□□□□□ -0.96
LIG1-210ENST00000596332 MTNR1AP48039 350 aa9.08□□□□□ -0.96
LIG1-210ENST00000596332 GDI2P50395 445 aaKnown RBP9.08□□□□□ -0.96
LIG1-210ENST00000596332 RPS7P62081 194 aaKnown RBP9.08□□□□□ -0.96
LIG1-210ENST00000596332 PLP2Q04941 152 aa9.08□□□□□ -0.96
LIG1-210ENST00000596332 TBC1D28Q2M2D7 210 aa9.08□□□□□ -0.96
LIG1-210ENST00000596332 TMEM200AQ86VY9 491 aa9.08□□□□□ -0.96
LIG1-210ENST00000596332 SLC35F2Q8IXU6 374 aa9.08□□□□□ -0.96
LIG1-210ENST00000596332 ALDH16A1Q8IZ83 802 aa9.08□□□□□ -0.96
LIG1-210ENST00000596332 ZNF454Q8N9F8 522 aa9.08□□□□□ -0.96
LIG1-210ENST00000596332 OR2AJ1Q8NGZ0 328 aa9.08□□□□□ -0.96
LIG1-210ENST00000596332 THEM6Q8WUY1 208 aa9.08□□□□□ -0.96
LIG1-210ENST00000596332 PPP1R14AQ96A00 147 aa9.08□□□□□ -0.96
LIG1-210ENST00000596332 RNFT2Q96EX2 444 aa9.08□□□□□ -0.96
LIG1-210ENST00000596332 DOK1Q99704 481 aa9.08□□□□□ -0.96
LIG1-210ENST00000596332 ATF6BQ99941 703 aa9.08□□□□□ -0.96
LIG1-210ENST00000596332 DHRS9Q9BPW9 319 aa9.08□□□□□ -0.96
LIG1-210ENST00000596332 TRAF4Q9BUZ4 470 aaPredicted RBP9.08□□□□□ -0.96
LIG1-210ENST00000596332 ANKRD60Q9BZ19 345 aa9.08□□□□□ -0.96
LIG1-210ENST00000596332 PLCXD1Q9NUJ7 323 aa9.08□□□□□ -0.96
LIG1-210ENST00000596332 TBCCD1Q9NVR7 557 aa9.08□□□□□ -0.96
LIG1-210ENST00000596332 CLN6Q9NWW5 311 aa9.08□□□□□ -0.96
LIG1-210ENST00000596332 IMPAD1Q9NX62 359 aa9.08□□□□□ -0.96
LIG1-210ENST00000596332 UBAP1Q9NZ09 502 aa9.08□□□□□ -0.96
LIG1-210ENST00000596332 H2AFY2Q9P0M6 372 aaPredicted RBP9.08□□□□□ -0.96
LIG1-210ENST00000596332 MRM2Q9UI43 246 aaKnown RBP9.08□□□□□ -0.96
LIG1-210ENST00000596332 ATP23Q9Y6H3 246 aa9.08□□□□□ -0.96
LIG1-210ENST00000596332 AKAP6Q13023 2319 aa9.08□□□□□ -0.96
LIG1-210ENST00000596332 CACNA1DQ01668 2161 aa9.07□□□□□ -0.96
LIG1-210ENST00000596332 PSMD9O00233 223 aa9.07□□□□□ -0.96
LIG1-210ENST00000596332 CLPTM1O96005 669 aa9.07□□□□□ -0.96
LIG1-210ENST00000596332 PNPP00491 289 aa9.07□□□□□ -0.96
LIG1-210ENST00000596332 IGHA1P01876 353 aa9.07□□□□□ -0.96
LIG1-210ENST00000596332 LYNP07948 512 aa9.07□□□□□ -0.96
LIG1-210ENST00000596332 ZNF250P15622 560 aa9.07□□□□□ -0.96
LIG1-210ENST00000596332 CCNOP22674 350 aa9.07□□□□□ -0.96
LIG1-210ENST00000596332 APOBEC3AP31941 199 aaPredicted RBP9.07□□□□□ -0.96
LIG1-210ENST00000596332 MPV17P39210 176 aa9.07□□□□□ -0.96
LIG1-210ENST00000596332 IL5RAQ01344 420 aa9.07□□□□□ -0.96
LIG1-210ENST00000596332 ECH1Q13011 328 aa9.07□□□□□ -0.96
LIG1-210ENST00000596332 SNTB2Q13425 540 aaKnown RBP9.07□□□□□ -0.96
LIG1-210ENST00000596332 TNK1Q13470 666 aa9.07□□□□□ -0.96
LIG1-210ENST00000596332 SNAI3Q3KNW1 292 aa9.07□□□□□ -0.96
LIG1-210ENST00000596332 LCN1P1Q5VSP4 162 aa9.07□□□□□ -0.96
LIG1-210ENST00000596332 LRRN1Q6UXK5 716 aa9.07□□□□□ -0.96
LIG1-210ENST00000596332 SPATC1Q76KD6 591 aa9.07□□□□□ -0.96
LIG1-210ENST00000596332 THAP5Q7Z6K1 395 aa9.07□□□□□ -0.96
LIG1-210ENST00000596332 ZNF485Q8NCK3 441 aa9.07□□□□□ -0.96
LIG1-210ENST00000596332 OR52I1Q8NGK6 324 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms