RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 OR51E2Q9H255 320 aa12.88□□□□□ -0.35
SHKBP1-211ENST00000595945 KCNN2Q9H2S1 579 aa12.88□□□□□ -0.35
SHKBP1-211ENST00000595945 B3GNT2Q9NY97 397 aa12.88□□□□□ -0.35
SHKBP1-211ENST00000595945 ZNF629Q9UEG4 869 aaPredicted RBP12.88□□□□□ -0.35
SHKBP1-211ENST00000595945 RSL24D1Q9UHA3 163 aaKnown RBP12.88□□□□□ -0.35
SHKBP1-211ENST00000595945 ATPIF1Q9UII2 106 aa12.88□□□□□ -0.35
SHKBP1-211ENST00000595945 SH3BGRL2Q9UJC5 107 aa12.88□□□□□ -0.35
SHKBP1-211ENST00000595945 R4GMQ9 66 aa12.88□□□□□ -0.35
SHKBP1-211ENST00000595945 SPTBN1Q01082 2364 aaKnown RBP12.88□□□□□ -0.35
SHKBP1-211ENST00000595945 TRGV8A0A0C4DH27 118 aa12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 PNMA8CA0A1B0GUJ8 204 aa12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 TRIM64BA6NI03 449 aa12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 MSTNO14793 375 aa12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 SGCEO43556 437 aa12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 GPRIN2O60269 458 aa12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 GPX5O75715 221 aa12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 PNPP00491 289 aa12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 PATE4P0C8F1 98 aa12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 HOXB1P14653 301 aaPredicted RBP12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 GDI2P50395 445 aaKnown RBP12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 MMP16P51512 607 aa12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 CASP6P55212 293 aa12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 PSMA6P60900 246 aaKnown RBP12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 GRB2P62993 217 aaKnown RBP12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 TGFBR3Q03167 851 aa12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 MFGE8Q08431 387 aaPredicted RBP12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 ECH1Q13011 328 aa12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 P2RY6Q15077 328 aa12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 SLC36A2Q495M3 483 aa12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 HIKESHIQ53FT3 197 aa12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 ZNF774Q6NX45 483 aa12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 GDPGP1Q6ZNW5 385 aa12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 CCDC36Q8IYA8 594 aa12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 PRSS35Q8N3Z0 413 aa12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 IL17RDQ8NFM7 739 aa12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 OR1F12Q8NHA8 337 aa12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 C12orf43Q96C57 262 aaKnown RBP12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 KCNJ15Q99712 375 aa12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 COQ7Q99807 217 aa12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 ATF6BQ99941 703 aa12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 HDHD2Q9H0R4 259 aa12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 NOX3Q9HBY0 568 aa12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 G6PC2Q9NQR9 355 aa12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 FAM206AQ9NX38 181 aa12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 JKAMPQ9P055 326 aa12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 FRRS1LQ9P0K9 344 aa12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 STUB1Q9UNE7 303 aa12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 OSGIN2Q9Y236 505 aa12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 SLC5A6Q9Y289 635 aa12.87□□□□□ -0.35
SHKBP1-211ENST00000595945 ARPC4-TTLL3A0A0A6YYG9 625 aa12.86□□□□□ -0.35
SHKBP1-211ENST00000595945 TRBV2A0A0J9YWF9 115 aa12.86□□□□□ -0.35
SHKBP1-211ENST00000595945 H3BMQ9 156 aa12.86□□□□□ -0.35
SHKBP1-211ENST00000595945 AIREO43918 545 aa12.86□□□□□ -0.35
SHKBP1-211ENST00000595945 DOK2O60496 412 aa12.86□□□□□ -0.35
SHKBP1-211ENST00000595945 LYZL6O75951 148 aa12.86□□□□□ -0.35
SHKBP1-211ENST00000595945 UBL3O95164 117 aa12.86□□□□□ -0.35
SHKBP1-211ENST00000595945 HLA-HP01893 362 aa12.86□□□□□ -0.35
SHKBP1-211ENST00000595945 COX5BP10606 129 aa12.86□□□□□ -0.35
SHKBP1-211ENST00000595945 GALP22466 123 aa12.86□□□□□ -0.35
SHKBP1-211ENST00000595945 PSMA1P25786 263 aaKnown RBP12.86□□□□□ -0.35
SHKBP1-211ENST00000595945 RPS11P62280 158 aaKnown RBP eCLIP12.86□□□□□ -0.35
SHKBP1-211ENST00000595945 SLC3A1Q07837 685 aa12.86□□□□□ -0.35
SHKBP1-211ENST00000595945 ZNF829Q3KNS6 432 aaPredicted RBP12.86□□□□□ -0.35
SHKBP1-211ENST00000595945 TIMM50Q3ZCQ8 353 aa12.86□□□□□ -0.35
SHKBP1-211ENST00000595945 PABPC1L2AQ5JQF8 200 aa12.86□□□□□ -0.35
SHKBP1-211ENST00000595945 WDR38Q5JTN6 314 aa12.86□□□□□ -0.35
SHKBP1-211ENST00000595945 PRSS45Q7RTY3 260 aa12.86□□□□□ -0.35
SHKBP1-211ENST00000595945 CXorf67Q86X51 503 aaPredicted RBP12.86□□□□□ -0.35
SHKBP1-211ENST00000595945 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.86□□□□□ -0.35
SHKBP1-211ENST00000595945 AKR7LQ8NHP1 331 aa12.86□□□□□ -0.35
SHKBP1-211ENST00000595945 RGP1Q92546 391 aaPredicted RBP12.86□□□□□ -0.35
SHKBP1-211ENST00000595945 GHSRQ92847 366 aa12.86□□□□□ -0.35
SHKBP1-211ENST00000595945 TRMT61AQ96FX7 289 aaKnown RBP12.86□□□□□ -0.35
SHKBP1-211ENST00000595945 ZNF75AQ96N20 296 aa12.86□□□□□ -0.35
SHKBP1-211ENST00000595945 SLC17A5Q9NRA2 495 aa12.86□□□□□ -0.35
SHKBP1-211ENST00000595945 PLEK2Q9NYT0 353 aa12.86□□□□□ -0.35
SHKBP1-211ENST00000595945 CADP27708 2225 aa12.85□□□□□ -0.35
SHKBP1-211ENST00000595945 TRDV1A0A1B0GX56 115 aa12.85□□□□□ -0.35
SHKBP1-211ENST00000595945 CCDC160A6NGH7 325 aa12.85□□□□□ -0.35
SHKBP1-211ENST00000595945 ACOD1A6NK06 481 aa12.85□□□□□ -0.35
SHKBP1-211ENST00000595945 A8MXE2 369 aa12.85□□□□□ -0.35
SHKBP1-211ENST00000595945 SC5DO75845 299 aa12.85□□□□□ -0.35
SHKBP1-211ENST00000595945 ZFPL1O95159 310 aa12.85□□□□□ -0.35
SHKBP1-211ENST00000595945 NR4A1P22736 598 aa12.85□□□□□ -0.35
SHKBP1-211ENST00000595945 ARR3P36575 388 aa12.85□□□□□ -0.35
SHKBP1-211ENST00000595945 FABP5Q01469 135 aa12.85□□□□□ -0.35
SHKBP1-211ENST00000595945 TAF13Q15543 124 aa12.85□□□□□ -0.35
SHKBP1-211ENST00000595945 TRAM1Q15629 374 aa12.85□□□□□ -0.35
SHKBP1-211ENST00000595945 SFRP5Q5T4F7 317 aa12.85□□□□□ -0.35
SHKBP1-211ENST00000595945 TMEM53Q6P2H8 277 aa12.85□□□□□ -0.35
SHKBP1-211ENST00000595945 TMEM91Q6ZNR0 172 aa12.85□□□□□ -0.35
SHKBP1-211ENST00000595945 MRGPRGQ86SM5 289 aa12.85□□□□□ -0.35
SHKBP1-211ENST00000595945 LIX1LQ8IVB5 337 aa12.85□□□□□ -0.35
SHKBP1-211ENST00000595945 C17orf78Q8N4C9 275 aa12.85□□□□□ -0.35
SHKBP1-211ENST00000595945 WDR31Q8NA23 367 aa12.85□□□□□ -0.35
SHKBP1-211ENST00000595945 RELL2Q8NC24 303 aaPredicted RBP12.85□□□□□ -0.35
SHKBP1-211ENST00000595945 NANOS1Q8WY41 292 aaKnown RBP12.85□□□□□ -0.35
SHKBP1-211ENST00000595945 RND1Q92730 232 aa12.85□□□□□ -0.35
SHKBP1-211ENST00000595945 PPP1R14AQ96A00 147 aa12.85□□□□□ -0.35
SHKBP1-211ENST00000595945 DCLRE1CQ96SD1 692 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms