RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 ARL9Q6T311 187 aa11.44□□□□□ -0.58
SHKBP1-209ENST00000595803 CFAP77Q6ZQR2 320 aa11.44□□□□□ -0.58
SHKBP1-209ENST00000595803 Q6ZT83 130 aa11.44□□□□□ -0.58
SHKBP1-209ENST00000595803 BEND4Q6ZU67 534 aa11.44□□□□□ -0.58
SHKBP1-209ENST00000595803 ANKRD13BQ86YJ7 626 aa11.44□□□□□ -0.58
SHKBP1-209ENST00000595803 PHC2Q8IXK0 858 aa11.44□□□□□ -0.58
SHKBP1-209ENST00000595803 OR1K1Q8NGR3 316 aa11.44□□□□□ -0.58
SHKBP1-209ENST00000595803 RNF133Q8WVZ7 376 aa11.44□□□□□ -0.58
SHKBP1-209ENST00000595803 FBXO17Q96EF6 278 aa11.44□□□□□ -0.58
SHKBP1-209ENST00000595803 LURAP1Q96LR2 239 aa11.44□□□□□ -0.58
SHKBP1-209ENST00000595803 ACOXLQ9NUZ1 547 aa11.44□□□□□ -0.58
SHKBP1-209ENST00000595803 TRBV2A0A0J9YWF9 115 aa11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 ZNF878C9JN71 531 aa11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 E9PLN8 166 aa11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 IL18BPO95998 194 aa11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 CGAP01215 116 aa11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 CD8BP10966 210 aa11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 HOXB4P17483 251 aaPredicted RBP11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 IGHV1-2P23083 117 aa11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 PSMA1P25786 263 aaKnown RBP11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 HSD11B1P28845 292 aa11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 TGM4P49221 684 aa11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 TMBIM6P55061 237 aa11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 GRB2P62993 217 aaKnown RBP11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 HIST1H3AP68431 136 aa11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 SSX1Q16384 188 aa11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 CCDC92Q53HC0 331 aaPredicted RBP11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 ELFN2Q5R3F8 820 aa11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 HIST2H3PS2Q5TEC6 136 aa11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 OR7E24Q6IFN5 339 aa11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 TMEM53Q6P2H8 277 aa11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 HIST2H3AQ71DI3 136 aa11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 RHOUQ7L0Q8 258 aa11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 ZNF627Q7L945 461 aa11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 DPPA2Q7Z7J5 298 aa11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 P2RY8Q86VZ1 359 aa11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 NAXEQ8NCW5 288 aa11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 ZNF420Q8TAQ5 688 aaPredicted RBP11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 RND1Q92730 232 aa11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 BCL2L2Q92843 193 aaPredicted RBP11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 VKORC1Q9BQB6 163 aa11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 OPN3Q9H1Y3 402 aaPredicted RBP11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 PIGMQ9H3S5 423 aa11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 NIPAL2Q9H841 368 aa11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 GALNT8Q9NY28 637 aa11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 PLEK2Q9NYT0 353 aa11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 RSL24D1Q9UHA3 163 aaKnown RBP11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 SSR3Q9UNL2 185 aa11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 OSGIN2Q9Y236 505 aa11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 GRIP1Q9Y3R0 1128 aa11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 LRP12Q9Y561 859 aa11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 SIRT4Q9Y6E7 314 aaPredicted RBP11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 ARHGAP21Q5T5U3 1957 aa11.43□□□□□ -0.58
SHKBP1-209ENST00000595803 DOCK7Q96N67 2140 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 A0A0G2JNJ9 132 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 SGCEO43556 437 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 PLPP2O43688 288 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 AIREO43918 545 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 ABHD16AO95870 558 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 CD1AP06126 327 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 ITGA5P08648 1049 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 PATE4P0C8F1 98 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 CD79AP11912 226 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 HOXB1P14653 301 aaPredicted RBP11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 ZNF32P17041 273 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 CD53P19397 219 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 NR4A1P22736 598 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 GADD45AP24522 165 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 DCTDP32321 178 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 ARR3P36575 388 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 TGFBR2P37173 567 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 OPRL1P41146 370 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 ECH1Q13011 328 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 ALKBH1Q13686 389 aaKnown RBP11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 CDK5R1Q15078 307 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 TESK1Q15569 626 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 TRAM1Q15629 374 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 TIMM50Q3ZCQ8 353 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 CCDC36Q8IYA8 594 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 ALDH16A1Q8IZ83 802 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 OR10S1Q8NGN2 331 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 RAB2BQ8WUD1 216 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 NANOS1Q8WY41 292 aaKnown RBP11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 TMEM203Q969S6 136 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 KCNJ15Q99712 375 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 OR2H1Q9GZK4 316 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 NAA50Q9GZZ1 169 aaKnown RBP11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 EXOSC4Q9NPD3 245 aaKnown RBP11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 ZNF629Q9UEG4 869 aaPredicted RBP11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 Q9UFV3 132 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 ST6GALNAC2Q9UJ37 374 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 ENPP5Q9UJA9 477 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 MEMO1Q9Y316 297 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 R4GMQ9 66 aa11.42□□□□□ -0.58
SHKBP1-209ENST00000595803 TMEM269A0A1B0GVZ9 245 aa11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 CCL21O00585 134 aa11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 UBL3O95164 117 aa11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 WNT11O96014 354 aa11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 APOC1P02654 83 aa11.41□□□□□ -0.58
SHKBP1-209ENST00000595803 GABRA5P31644 462 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms