RNA–Protein interactions for RNA: ENST00000595631.5

SHKBP1-207, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-207ENST00000595631 SYNPRQ8TBG9 265 aa11.82□□□□□ -0.52
SHKBP1-207ENST00000595631 IPCEF1Q8WWN9 437 aaPredicted RBP11.82□□□□□ -0.52
SHKBP1-207ENST00000595631 STMN2Q93045 179 aa11.82□□□□□ -0.52
SHKBP1-207ENST00000595631 MARS2Q96GW9 593 aaKnown RBP11.82□□□□□ -0.52
SHKBP1-207ENST00000595631 INTS14Q96SY0 518 aa11.82□□□□□ -0.52
SHKBP1-207ENST00000595631 AMELYQ99218 206 aa11.82□□□□□ -0.52
SHKBP1-207ENST00000595631 COQ7Q99807 217 aa11.82□□□□□ -0.52
SHKBP1-207ENST00000595631 SLC29A1Q99808 456 aa11.82□□□□□ -0.52
SHKBP1-207ENST00000595631 TEX12Q9BXU0 123 aa11.82□□□□□ -0.52
SHKBP1-207ENST00000595631 BCL2L14Q9BZR8 327 aa11.82□□□□□ -0.52
SHKBP1-207ENST00000595631 HDHD2Q9H0R4 259 aa11.82□□□□□ -0.52
SHKBP1-207ENST00000595631 TPK1Q9H3S4 243 aa11.82□□□□□ -0.52
SHKBP1-207ENST00000595631 DYNLRB1Q9NP97 96 aa11.82□□□□□ -0.52
SHKBP1-207ENST00000595631 USE1Q9NZ43 259 aa11.82□□□□□ -0.52
SHKBP1-207ENST00000595631 KCNG2Q9UJ96 466 aa11.82□□□□□ -0.52
SHKBP1-207ENST00000595631 YLPM1P49750 1951 aaKnown RBP11.81□□□□□ -0.52
SHKBP1-207ENST00000595631 CCDC182A6NF36 153 aa11.81□□□□□ -0.52
SHKBP1-207ENST00000595631 F5H5K5 113 aa11.81□□□□□ -0.52
SHKBP1-207ENST00000595631 ICMTO60725 284 aa11.81□□□□□ -0.52
SHKBP1-207ENST00000595631 NAT2P11245 290 aa11.81□□□□□ -0.52
SHKBP1-207ENST00000595631 BMP4P12644 408 aa11.81□□□□□ -0.52
SHKBP1-207ENST00000595631 ANOS1P23352 680 aa11.81□□□□□ -0.52
SHKBP1-207ENST00000595631 NAA10P41227 235 aaPredicted RBP11.81□□□□□ -0.52
SHKBP1-207ENST00000595631 PPOXP50336 477 aa11.81□□□□□ -0.52
SHKBP1-207ENST00000595631 NUDT6P53370 316 aa11.81□□□□□ -0.52
SHKBP1-207ENST00000595631 KLF3P57682 345 aaPredicted RBP11.81□□□□□ -0.52
SHKBP1-207ENST00000595631 PCK2Q16822 640 aa11.81□□□□□ -0.52
SHKBP1-207ENST00000595631 CLEC12BQ2HXU8 276 aa11.81□□□□□ -0.52
SHKBP1-207ENST00000595631 KRTAP27-1Q3LI81 207 aa11.81□□□□□ -0.52
SHKBP1-207ENST00000595631 DPY19L4Q7Z388 723 aa11.81□□□□□ -0.52
SHKBP1-207ENST00000595631 TIGD4Q8IY51 512 aa11.81□□□□□ -0.52
SHKBP1-207ENST00000595631 CIARTQ8N365 385 aaPredicted RBP11.81□□□□□ -0.52
SHKBP1-207ENST00000595631 ST7LQ8TDW4 575 aa11.81□□□□□ -0.52
SHKBP1-207ENST00000595631 IL4I1Q96RQ9 567 aa11.81□□□□□ -0.52
SHKBP1-207ENST00000595631 ATF6BQ99941 703 aa11.81□□□□□ -0.52
SHKBP1-207ENST00000595631 MARCH7Q9H992 704 aa11.81□□□□□ -0.52
SHKBP1-207ENST00000595631 ELOVL3Q9HB03 270 aa11.81□□□□□ -0.52
SHKBP1-207ENST00000595631 TAAR3PQ9P1P4 343 aa11.81□□□□□ -0.52
SHKBP1-207ENST00000595631 KLHDC2Q9Y2U9 406 aa11.81□□□□□ -0.52
SHKBP1-207ENST00000595631 STARD10Q9Y365 291 aa11.81□□□□□ -0.52
SHKBP1-207ENST00000595631 TANC2Q9HCD6 1990 aa11.81□□□□□ -0.52
SHKBP1-207ENST00000595631 IGLV3-9A0A075B6K5 115 aa11.8□□□□□ -0.52
SHKBP1-207ENST00000595631 C5orf63A6NC05 138 aa11.8□□□□□ -0.52
SHKBP1-207ENST00000595631 M0R233 179 aa11.8□□□□□ -0.52
SHKBP1-207ENST00000595631 PRODHO43272 600 aa11.8□□□□□ -0.52
SHKBP1-207ENST00000595631 TLX2O43763 284 aaPredicted RBP11.8□□□□□ -0.52
SHKBP1-207ENST00000595631 MRPL3P09001 348 aaKnown RBP11.8□□□□□ -0.52
SHKBP1-207ENST00000595631 ACSM4P0C7M7 580 aa11.8□□□□□ -0.52
SHKBP1-207ENST00000595631 EVX1P49640 407 aa11.8□□□□□ -0.52
SHKBP1-207ENST00000595631 ALDH3A2P51648 485 aa11.8□□□□□ -0.52
SHKBP1-207ENST00000595631 BLVRAP53004 296 aa11.8□□□□□ -0.52
SHKBP1-207ENST00000595631 PRSS12P56730 875 aa11.8□□□□□ -0.52
SHKBP1-207ENST00000595631 EFNB1P98172 346 aa11.8□□□□□ -0.52
SHKBP1-207ENST00000595631 EIF2B1Q14232 305 aaKnown RBP11.8□□□□□ -0.52
SHKBP1-207ENST00000595631 RCN1Q15293 331 aa11.8□□□□□ -0.52
SHKBP1-207ENST00000595631 TEX30Q5JUR7 227 aa11.8□□□□□ -0.52
SHKBP1-207ENST00000595631 PRSS57Q6UWY2 283 aa11.8□□□□□ -0.52
SHKBP1-207ENST00000595631 LURAP1LQ8IV03 231 aa11.8□□□□□ -0.52
SHKBP1-207ENST00000595631 ZNF525Q8N782 197 aa11.8□□□□□ -0.52
SHKBP1-207ENST00000595631 TMEM163Q8TC26 289 aa11.8□□□□□ -0.52
SHKBP1-207ENST00000595631 KLF14Q8TD94 323 aaPredicted RBP11.8□□□□□ -0.52
SHKBP1-207ENST00000595631 SLAMF6Q96DU3 332 aa11.8□□□□□ -0.52
SHKBP1-207ENST00000595631 MBOAT4Q96T53 435 aa11.8□□□□□ -0.52
SHKBP1-207ENST00000595631 CENPMQ9NSP4 180 aa11.8□□□□□ -0.52
SHKBP1-207ENST00000595631 TBCCD1Q9NVR7 557 aa11.8□□□□□ -0.52
SHKBP1-207ENST00000595631 ENOPH1Q9UHY7 261 aa11.8□□□□□ -0.52
SHKBP1-207ENST00000595631 ATPIF1Q9UII2 106 aa11.8□□□□□ -0.52
SHKBP1-207ENST00000595631 F8P00451 2351 aa11.79□□□□□ -0.52
SHKBP1-207ENST00000595631 CELSR1Q9NYQ6 3014 aa11.79□□□□□ -0.52
SHKBP1-207ENST00000595631 ANPEPP15144 967 aa11.79□□□□□ -0.52
SHKBP1-207ENST00000595631 GCH1P30793 250 aa11.79□□□□□ -0.52
SHKBP1-207ENST00000595631 EFNA4P52798 201 aa11.79□□□□□ -0.52
SHKBP1-207ENST00000595631 HCCSP53701 268 aa11.79□□□□□ -0.52
SHKBP1-207ENST00000595631 TNK1Q13470 666 aa11.79□□□□□ -0.52
SHKBP1-207ENST00000595631 HLXQ14774 488 aaPredicted RBP11.79□□□□□ -0.52
SHKBP1-207ENST00000595631 NKPD1Q17RQ9 610 aa11.79□□□□□ -0.52
SHKBP1-207ENST00000595631 ZNF718Q3SXZ3 478 aa11.79□□□□□ -0.52
SHKBP1-207ENST00000595631 SLC35D3Q5M8T2 416 aa11.79□□□□□ -0.52
SHKBP1-207ENST00000595631 DNM1P46Q6ZS02 220 aa11.79□□□□□ -0.52
SHKBP1-207ENST00000595631 UBE2FQ969M7 185 aa11.79□□□□□ -0.52
SHKBP1-207ENST00000595631 C9orf16Q9BUW7 83 aa11.79□□□□□ -0.52
SHKBP1-207ENST00000595631 ABHD6Q9BV23 337 aa11.79□□□□□ -0.52
SHKBP1-207ENST00000595631 TMUB1Q9BVT8 246 aa11.79□□□□□ -0.52
SHKBP1-207ENST00000595631 PRRG3Q9BZD7 231 aa11.79□□□□□ -0.52
SHKBP1-207ENST00000595631 TOR3AQ9H497 397 aa11.79□□□□□ -0.52
SHKBP1-207ENST00000595631 BARX1Q9HBU1 254 aaPredicted RBP11.79□□□□□ -0.52
SHKBP1-207ENST00000595631 DDX28Q9NUL7 540 aaKnown RBP11.79□□□□□ -0.52
SHKBP1-207ENST00000595631 PTTG3PQ9NZH4 202 aa11.79□□□□□ -0.52
SHKBP1-207ENST00000595631 ORC6Q9Y5N6 252 aa11.79□□□□□ -0.52
SHKBP1-207ENST00000595631 H7C1Q1 480 aa11.78□□□□□ -0.52
SHKBP1-207ENST00000595631 M0R135 149 aa11.78□□□□□ -0.52
SHKBP1-207ENST00000595631 F12P00748 615 aaPredicted RBP11.78□□□□□ -0.52
SHKBP1-207ENST00000595631 IGHV3-13P01766 116 aa11.78□□□□□ -0.52
SHKBP1-207ENST00000595631 PRKXP51817 358 aa11.78□□□□□ -0.52
SHKBP1-207ENST00000595631 RAD23AP54725 363 aa11.78□□□□□ -0.52
SHKBP1-207ENST00000595631 ECH1Q13011 328 aa11.78□□□□□ -0.52
SHKBP1-207ENST00000595631 PSG7Q13046 419 aa11.78□□□□□ -0.52
SHKBP1-207ENST00000595631 AADACL4Q5VUY2 407 aa11.78□□□□□ -0.52
SHKBP1-207ENST00000595631 MBNL2Q5VZF2 373 aaKnown RBP11.78□□□□□ -0.52
SHKBP1-207ENST00000595631 LPCAT4Q643R3 524 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms