RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 MRPL3P09001 348 aaKnown RBP13.81□□□□□ -0.2
PNKP-204ENST00000594661 APEHP13798 732 aaKnown RBP13.81□□□□□ -0.2
PNKP-204ENST00000594661 IL12BP29460 328 aa13.81□□□□□ -0.2
PNKP-204ENST00000594661 OR2F1Q13607 317 aa13.81□□□□□ -0.2
PNKP-204ENST00000594661 FHL1Q13642 323 aa13.81□□□□□ -0.2
PNKP-204ENST00000594661 UBE2NLQ5JXB2 153 aa13.81□□□□□ -0.2
PNKP-204ENST00000594661 ARHGAP11AQ6P4F7 1023 aa13.81□□□□□ -0.2
PNKP-204ENST00000594661 ZNF546Q86UE3 836 aa13.81□□□□□ -0.2
PNKP-204ENST00000594661 ARL11Q969Q4 196 aa13.81□□□□□ -0.2
PNKP-204ENST00000594661 C3orf49Q96BT1 292 aa13.81□□□□□ -0.2
PNKP-204ENST00000594661 TOLLIPQ9H0E2 274 aa13.81□□□□□ -0.2
PNKP-204ENST00000594661 AKIRIN1Q9H9L7 192 aaPredicted RBP13.81□□□□□ -0.2
PNKP-204ENST00000594661 CHMP1AQ9HD42 196 aaPredicted RBP13.81□□□□□ -0.2
PNKP-204ENST00000594661 UQCC1Q9NVA1 299 aa13.81□□□□□ -0.2
PNKP-204ENST00000594661 FBXL4Q9UKA2 621 aa13.81□□□□□ -0.2
PNKP-204ENST00000594661 A0A087WUJ7 227 aa13.81□□□□□ -0.2
PNKP-204ENST00000594661 C17orf51A8MQB3 221 aa13.81□□□□□ -0.2
PNKP-204ENST00000594661 TSPAN2O60636 221 aa13.81□□□□□ -0.2
PNKP-204ENST00000594661 ALOX12BO75342 701 aa13.81□□□□□ -0.2
PNKP-204ENST00000594661 IFNA10P01566 189 aa13.81□□□□□ -0.2
PNKP-204ENST00000594661 MT-ND4LP03901 98 aa13.81□□□□□ -0.2
PNKP-204ENST00000594661 GYPBP06028 91 aa13.81□□□□□ -0.2
PNKP-204ENST00000594661 CCR4P51679 360 aa13.81□□□□□ -0.2
PNKP-204ENST00000594661 NRG3P56975 720 aa13.81□□□□□ -0.2
PNKP-204ENST00000594661 SRSF3P84103 164 aaKnown RBP13.81□□□□□ -0.2
PNKP-204ENST00000594661 PLCXD2Q0VAA5 305 aa13.81□□□□□ -0.2
PNKP-204ENST00000594661 RAB12Q6IQ22 244 aa13.81□□□□□ -0.2
PNKP-204ENST00000594661 LINGO2Q7L985 606 aa13.81□□□□□ -0.2
PNKP-204ENST00000594661 OVCH1Q7RTY7 1134 aa13.81□□□□□ -0.2
PNKP-204ENST00000594661 CEACAM19Q7Z692 300 aa13.81□□□□□ -0.2
PNKP-204ENST00000594661 OR1J4Q8NGS1 313 aa13.81□□□□□ -0.2
PNKP-204ENST00000594661 ZNF524Q96C55 264 aa13.81□□□□□ -0.2
PNKP-204ENST00000594661 MEGF10Q96KG7 1140 aa13.81□□□□□ -0.2
PNKP-204ENST00000594661 RHOVQ96L33 236 aa13.81□□□□□ -0.2
PNKP-204ENST00000594661 ZNF75AQ96N20 296 aa13.81□□□□□ -0.2
PNKP-204ENST00000594661 OCSTAMPQ9BR26 566 aa13.81□□□□□ -0.2
PNKP-204ENST00000594661 TRAV1-2A0A0B4J238 106 aa13.8□□□□□ -0.2
PNKP-204ENST00000594661 VSTM2BA6NLU5 285 aa13.8□□□□□ -0.2
PNKP-204ENST00000594661 OR2T1O43869 369 aa13.8□□□□□ -0.2
PNKP-204ENST00000594661 NDUFB2O95178 105 aa13.8□□□□□ -0.2
PNKP-204ENST00000594661 EPXP11678 715 aa13.8□□□□□ -0.2
PNKP-204ENST00000594661 CD79AP11912 226 aa13.8□□□□□ -0.2
PNKP-204ENST00000594661 FGF5P12034 268 aa13.8□□□□□ -0.2
PNKP-204ENST00000594661 SLC2A5P22732 501 aa13.8□□□□□ -0.2
PNKP-204ENST00000594661 ZNF440Q8IYI8 595 aa13.8□□□□□ -0.2
PNKP-204ENST00000594661 APCDD1LQ8NCL9 501 aa13.8□□□□□ -0.2
PNKP-204ENST00000594661 NFAM1Q8NET5 270 aaPredicted RBP13.8□□□□□ -0.2
PNKP-204ENST00000594661 OR52E2Q8NGJ4 325 aa13.8□□□□□ -0.2
PNKP-204ENST00000594661 OIT3Q8WWZ8 545 aa13.8□□□□□ -0.2
PNKP-204ENST00000594661 C14orf79Q96F83 325 aa13.8□□□□□ -0.2
PNKP-204ENST00000594661 TIMP4Q99727 224 aa13.8□□□□□ -0.2
PNKP-204ENST00000594661 TMEM185BQ9H7F4 350 aa13.8□□□□□ -0.2
PNKP-204ENST00000594661 TMEM138Q9NPI0 162 aa13.8□□□□□ -0.2
PNKP-204ENST00000594661 TMEM272A0A1B0GTI8 110 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 PYCARD-AS1I3L0S3 204 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 ZNF264O43296 627 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 ONECUT2O95948 504 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 SBK2P0C263 348 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 NQO2P16083 231 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 ZNF14P17017 642 aaPredicted RBP13.79□□□□□ -0.2
PNKP-204ENST00000594661 ZNF28P17035 718 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 SDHAP31040 664 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 RAB5CP51148 216 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 ZFP36L1Q07352 338 aaKnown RBP13.79□□□□□ -0.2
PNKP-204ENST00000594661 C21orf62-AS1Q17RA5 79 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 C16orf47Q6ZP98 133 aaPredicted RBP13.79□□□□□ -0.2
PNKP-204ENST00000594661 MAMDC2Q7Z304 686 aaPredicted RBP13.79□□□□□ -0.2
PNKP-204ENST00000594661 IZUMO1Q8IYV9 350 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 OR4A4PQ8NGN8 299 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 ABHD4Q8TB40 342 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 SLAMF9Q96A28 289 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 VRK1Q99986 396 aaPredicted RBP13.79□□□□□ -0.2
PNKP-204ENST00000594661 NAA11Q9BSU3 229 aaPredicted RBP13.79□□□□□ -0.2
PNKP-204ENST00000594661 MFRPQ9BY79 579 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 PRDM13Q9H4Q3 707 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 ADGRL4Q9HBW9 690 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 INPP5EQ9NRR6 644 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 PLPP2O43688 288 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 CCL4P13236 92 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 EMP2P54851 167 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 CASP6P55212 293 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 PYY3Q5JQD4 70 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 FAM69BQ5VUD6 431 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 TMEM200AQ86VY9 491 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 CMTM4Q8IZR5 234 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 ZNF383Q8NA42 475 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 SDR9C7Q8NEX9 313 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 OR5J2Q8NH18 312 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 OR4K13Q8NH42 304 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 TAAR9Q96RI9 348 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 TSPAN10Q9H1Z9 355 aaPredicted RBP13.79□□□□□ -0.2
PNKP-204ENST00000594661 CCDC86Q9H6F5 360 aaKnown RBP13.79□□□□□ -0.2
PNKP-204ENST00000594661 TRIM36Q9NQ86 728 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 TMEM100Q9NV29 134 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 RCC2Q9P258 522 aaKnown RBP13.79□□□□□ -0.2
PNKP-204ENST00000594661 CHRNA9Q9UGM1 479 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 ICAM5Q9UMF0 924 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 TNFSF18Q9UNG2 199 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 IER3IP1Q9Y5U9 82 aa13.79□□□□□ -0.2
PNKP-204ENST00000594661 IGKV1D-42A0A075B6H8 117 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms